RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	OAS1	P00973	400 aa	Known RBP	18.76	■□□□□ 0.59
SRM-206	ENST00000490101	FGG	P02679	453 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	SLC2A3	P11169	496 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	WEE1	P30291	646 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	L1CAM	P32004	1257 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	CCR1	P32246	355 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	CDKN2B	P42772	138 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	FNTB	P49356	437 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	CDH6	P55285	790 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	TBX4	P57082	545 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	RING1	Q06587	406 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	CA9	Q16790	459 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	ITPRIPL2	Q3MIP1	535 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	ZC3H12A	Q5D1E8	599 aa	Known RBP	18.76	■□□□□ 0.59
SRM-206	ENST00000490101	DGKK	Q5KSL6	1271 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	CCDC50	Q8IVM0	306 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	TTC16	Q8NEE8	873 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	RNF34	Q969K3	372 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	OSBPL8	Q9BZF1	889 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	PCDH18	Q9HCL0	1135 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	GKN1	Q9NS71	199 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	GPATCH2L	Q9NWQ4	482 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	ARHGEF38	Q9NXL2	777 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	SMARCAL1	Q9NZC9	954 aa		18.76	■□□□□ 0.59
SRM-206	ENST00000490101	SPTBN2	O15020	2390 aa		18.75	■□□□□ 0.59
SRM-206	ENST00000490101	hCG_1818297	A0A087WSY0	165 aa		18.75	■□□□□ 0.59
SRM-206	ENST00000490101	KCNU1	A8MYU2	1149 aa		18.75	■□□□□ 0.59
SRM-206	ENST00000490101	MSI1	O43347	362 aa	Known RBP	18.75	■□□□□ 0.59
SRM-206	ENST00000490101	COCH	O43405	550 aa		18.75	■□□□□ 0.59
SRM-206	ENST00000490101	IGLV3-27	P01718	113 aa		18.75	■□□□□ 0.59
SRM-206	ENST00000490101	LONRF2	Q1L5Z9	754 aa		18.75	■□□□□ 0.59
SRM-206	ENST00000490101	TFDP3	Q5H9I0	405 aa		18.75	■□□□□ 0.59
SRM-206	ENST00000490101	EFHC2	Q5JST6	749 aa		18.75	■□□□□ 0.59
SRM-206	ENST00000490101	TXNDC8	Q6A555	127 aa		18.75	■□□□□ 0.59
SRM-206	ENST00000490101	TRIM68	Q6AZZ1	485 aa		18.75	■□□□□ 0.59
SRM-206	ENST00000490101	ANKS1B	Q7Z6G8	1248 aa		18.75	■□□□□ 0.59
SRM-206	ENST00000490101	GPR161	Q8N6U8	529 aa	Known RBP	18.75	■□□□□ 0.59
SRM-206	ENST00000490101	MAIP1	Q8WWC4	291 aa		18.75	■□□□□ 0.59
SRM-206	ENST00000490101	MRPS31	Q92665	395 aa	Known RBP	18.75	■□□□□ 0.59
SRM-206	ENST00000490101	FCRL2	Q96LA5	508 aa	Predicted RBP	18.75	■□□□□ 0.59
SRM-206	ENST00000490101	HAPLN3	Q96S86	360 aa		18.75	■□□□□ 0.59
SRM-206	ENST00000490101	TKTL2	Q9H0I9	626 aa		18.75	■□□□□ 0.59
SRM-206	ENST00000490101	DHX35	Q9H5Z1	703 aa	Known RBP	18.75	■□□□□ 0.59
SRM-206	ENST00000490101	ANLN	Q9NQW6	1124 aa		18.75	■□□□□ 0.59
SRM-206	ENST00000490101	C2orf42	Q9NWW7	574 aa		18.75	■□□□□ 0.59
SRM-206	ENST00000490101	DLL3	Q9NYJ7	618 aa		18.75	■□□□□ 0.59
SRM-206	ENST00000490101	RASAL2	Q9UJF2	1139 aa		18.75	■□□□□ 0.59
SRM-206	ENST00000490101	ANAPC1	Q9H1A4	1944 aa		18.74	■□□□□ 0.59
SRM-206	ENST00000490101	SLC12A8	A0AV02	714 aa		18.74	■□□□□ 0.59
SRM-206	ENST00000490101	CTAGE15	A4D2H0	777 aa		18.74	■□□□□ 0.59
SRM-206	ENST00000490101		I6L893	689 aa	Predicted RBP	18.74	■□□□□ 0.59
SRM-206	ENST00000490101	SLU7	O95391	586 aa	Known RBP	18.74	■□□□□ 0.59
SRM-206	ENST00000490101	CTAGE8	P0CG41	777 aa		18.74	■□□□□ 0.59
SRM-206	ENST00000490101	PFKL	P17858	780 aa		18.74	■□□□□ 0.59
SRM-206	ENST00000490101	HOXC13	P31276	330 aa		18.74	■□□□□ 0.59
SRM-206	ENST00000490101	ZNF135	P52742	658 aa	Predicted RBP	18.74	■□□□□ 0.59
SRM-206	ENST00000490101	SRSF5	Q13243	272 aa	Known RBP	18.74	■□□□□ 0.59
SRM-206	ENST00000490101	DPYSL3	Q14195	570 aa		18.74	■□□□□ 0.59
SRM-206	ENST00000490101	KRT81	Q14533	505 aa		18.74	■□□□□ 0.59
SRM-206	ENST00000490101	CTAGE6	Q86UF2	777 aa		18.74	■□□□□ 0.59
SRM-206	ENST00000490101	CTAGE4	Q8IX94	777 aa		18.74	■□□□□ 0.59
SRM-206	ENST00000490101	TSC1	Q92574	1164 aa		18.74	■□□□□ 0.59
SRM-206	ENST00000490101	USP13	Q92995	863 aa	Predicted RBP	18.74	■□□□□ 0.59
SRM-206	ENST00000490101	KCTD15	Q96SI1	283 aa	Predicted RBP	18.74	■□□□□ 0.59
SRM-206	ENST00000490101	ZNF670	Q9BS34	389 aa		18.74	■□□□□ 0.59
SRM-206	ENST00000490101	OSBPL2	Q9H1P3	480 aa		18.74	■□□□□ 0.59
SRM-206	ENST00000490101	EBF3	Q9H4W6	596 aa		18.74	■□□□□ 0.59
SRM-206	ENST00000490101	TRPC7	Q9HCX4	862 aa		18.74	■□□□□ 0.59
SRM-206	ENST00000490101	PARD6A	Q9NPB6	346 aa		18.74	■□□□□ 0.59
SRM-206	ENST00000490101	RCOR3	Q9P2K3	495 aa	Predicted RBP	18.74	■□□□□ 0.59
SRM-206	ENST00000490101	DENND4C	Q5VZ89	1909 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	C2orf78	A6NCI8	922 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	SOBP	A7XYQ1	873 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101		K7ESF4	209 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	OLFM2	O95897	454 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	CD48	P09326	243 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	IL4R	P24394	825 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	DDX6	P26196	483 aa	Known RBP eCLIP	18.73	■□□□□ 0.59
SRM-206	ENST00000490101	COG7	P83436	770 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	SPEM2	Q0P670	501 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	SEMA3B	Q13214	749 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	MTA1	Q13330	715 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	KLF1	Q13351	362 aa	Predicted RBP	18.73	■□□□□ 0.59
SRM-206	ENST00000490101	CCIN	Q13939	588 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	SIM2	Q14190	667 aa	Predicted RBP	18.73	■□□□□ 0.59
SRM-206	ENST00000490101	LAIR1	Q6GTX8	287 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	MIB1	Q86YT6	1006 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	SPATA4	Q8NEY3	305 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	FAF2	Q96CS3	445 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	HERPUD2	Q9BSE4	406 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	CALN1	Q9BXU9	219 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	MAGEB5	Q9BZ81	275 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	NACA2	Q9H009	215 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	PRDM16	Q9HAZ2	1276 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	HPS4	Q9NQG7	708 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	TMPRSS4	Q9NRS4	437 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	TDP1	Q9NUW8	608 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	ZMYM5	Q9UJ78	669 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	OBSL1	O75147	1896 aa		18.73	■□□□□ 0.59
SRM-206	ENST00000490101	TCRBV7S2A1N4T	A0A589	114 aa		18.72	■□□□□ 0.59

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