RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 SMC2O95347 1197 aa16.43■□□□□ 0.22
PLOD3-216ENST00000489927 MOCS2O96007 188 aaPredicted RBP16.43■□□□□ 0.22
PLOD3-216ENST00000489927 SLC8A1P32418 973 aa16.43■□□□□ 0.22
PLOD3-216ENST00000489927 SFSWAPQ12872 951 aaKnown RBP16.43■□□□□ 0.22
PLOD3-216ENST00000489927 NNTQ13423 1086 aa16.43■□□□□ 0.22
PLOD3-216ENST00000489927 RRAGAQ7L523 313 aa16.43■□□□□ 0.22
PLOD3-216ENST00000489927 CCDC117Q8IWD4 279 aaPredicted RBP16.43■□□□□ 0.22
PLOD3-216ENST00000489927 AADATQ8N5Z0 425 aa16.43■□□□□ 0.22
PLOD3-216ENST00000489927 OR2T34Q8NGX1 318 aa16.43■□□□□ 0.22
PLOD3-216ENST00000489927 SMARCE1Q969G3 411 aa16.43■□□□□ 0.22
PLOD3-216ENST00000489927 ELF4Q99607 663 aaPredicted RBP16.43■□□□□ 0.22
PLOD3-216ENST00000489927 OMDQ99983 421 aa16.43■□□□□ 0.22
PLOD3-216ENST00000489927 ADAMTS1Q9UHI8 967 aa16.43■□□□□ 0.22
PLOD3-216ENST00000489927 XPO7Q9UIA9 1087 aaKnown RBP16.43■□□□□ 0.22
PLOD3-216ENST00000489927 SLCO3A1Q9UIG8 710 aa16.43■□□□□ 0.22
PLOD3-216ENST00000489927 FZD4Q9ULV1 537 aa16.43■□□□□ 0.22
PLOD3-216ENST00000489927 EDDM13A0A1B0GTR0 161 aa16.42■□□□□ 0.22
PLOD3-216ENST00000489927 TARSL2A2RTX5 802 aaKnown RBP16.42■□□□□ 0.22
PLOD3-216ENST00000489927 WNT9AO14904 365 aa16.42■□□□□ 0.22
PLOD3-216ENST00000489927 SRPRAP08240 638 aaKnown RBP16.42■□□□□ 0.22
PLOD3-216ENST00000489927 PSMD8P48556 350 aa16.42■□□□□ 0.22
PLOD3-216ENST00000489927 RPL34P49207 117 aaKnown RBP16.42■□□□□ 0.22
PLOD3-216ENST00000489927 ECT2LQ008S8 904 aa16.42■□□□□ 0.22
PLOD3-216ENST00000489927 SHBQ15464 509 aa16.42■□□□□ 0.22
PLOD3-216ENST00000489927 SYPL2Q5VXT5 272 aa16.42■□□□□ 0.22
PLOD3-216ENST00000489927 TAC4Q86UU9 113 aa16.42■□□□□ 0.22
PLOD3-216ENST00000489927 ARHGEF19Q8IW93 802 aa16.42■□□□□ 0.22
PLOD3-216ENST00000489927 APCDD1Q8J025 514 aa16.42■□□□□ 0.22
PLOD3-216ENST00000489927 PDCD7Q8N8D1 485 aaKnown RBP16.42■□□□□ 0.22
PLOD3-216ENST00000489927 SKA1Q96BD8 255 aa16.42■□□□□ 0.22
PLOD3-216ENST00000489927 FAM149B1Q96BN6 582 aa16.42■□□□□ 0.22
PLOD3-216ENST00000489927 FAM129BQ96TA1 746 aa16.42■□□□□ 0.22
PLOD3-216ENST00000489927 ST7Q9NRC1 585 aa16.42■□□□□ 0.22
PLOD3-216ENST00000489927 AASDHPPTQ9NRN7 309 aa16.42■□□□□ 0.22
PLOD3-216ENST00000489927 CEP83Q9Y592 693 aa16.42■□□□□ 0.22
PLOD3-216ENST00000489927 ITIH6Q6UXX5 1313 aa16.42■□□□□ 0.22
PLOD3-216ENST00000489927 CABIN1Q9Y6J0 2220 aa16.41■□□□□ 0.22
PLOD3-216ENST00000489927 CBX4O00257 560 aa16.41■□□□□ 0.22
PLOD3-216ENST00000489927 PSMA7O14818 248 aa16.41■□□□□ 0.22
PLOD3-216ENST00000489927 MOCS3O95396 460 aa16.41■□□□□ 0.22
PLOD3-216ENST00000489927 CD44P16070 742 aaKnown RBP16.41■□□□□ 0.22
PLOD3-216ENST00000489927 CD38P28907 300 aa16.41■□□□□ 0.22
PLOD3-216ENST00000489927 GPD2P43304 727 aa16.41■□□□□ 0.22
PLOD3-216ENST00000489927 NUMBP49757 651 aa16.41■□□□□ 0.22
PLOD3-216ENST00000489927 ADPRHP54922 357 aa16.41■□□□□ 0.22
PLOD3-216ENST00000489927 GCNT1Q02742 428 aa16.41■□□□□ 0.22
PLOD3-216ENST00000489927 CETN1Q12798 172 aa16.41■□□□□ 0.22
PLOD3-216ENST00000489927 DNAJC3Q13217 504 aa16.41■□□□□ 0.22
PLOD3-216ENST00000489927 CCDC40Q4G0X9 1142 aa16.41■□□□□ 0.22
PLOD3-216ENST00000489927 ZC3H12AQ5D1E8 599 aaKnown RBP16.41■□□□□ 0.22
PLOD3-216ENST00000489927 RNF219Q5W0B1 726 aaPredicted RBP16.41■□□□□ 0.22
PLOD3-216ENST00000489927 RAP1GAP2Q684P5 730 aa16.41■□□□□ 0.22
PLOD3-216ENST00000489927 ISM2Q6H9L7 571 aa16.41■□□□□ 0.22
PLOD3-216ENST00000489927 LGI2Q8N0V4 545 aa16.41■□□□□ 0.22
PLOD3-216ENST00000489927 STK40Q8N2I9 435 aa16.41■□□□□ 0.22
PLOD3-216ENST00000489927 OR14C36Q8NHC7 312 aa16.41■□□□□ 0.22
PLOD3-216ENST00000489927 SAP25Q8TEE9 199 aa16.41■□□□□ 0.22
PLOD3-216ENST00000489927 RPL10LQ96L21 214 aaKnown RBP16.41■□□□□ 0.22
PLOD3-216ENST00000489927 CEP63Q96MT8 703 aa16.41■□□□□ 0.22
PLOD3-216ENST00000489927 BBC3Q96PG8 261 aaPredicted RBP16.41■□□□□ 0.22
PLOD3-216ENST00000489927 ACACAQ13085 2346 aa16.41■□□□□ 0.22
PLOD3-216ENST00000489927 COL5A1P20908 1838 aaPredicted RBP16.4■□□□□ 0.22
PLOD3-216ENST00000489927 A0A087WV48 116 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 A0A1W2PR77 199 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 ENC1O14682 589 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 CAPN9O14815 690 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 P4HA2O15460 535 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 SART1O43290 800 aaKnown RBP16.4■□□□□ 0.22
PLOD3-216ENST00000489927 APOEP02649 317 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 ITGAVP06756 1048 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 GOT1P17174 413 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 ABCB4P21439 1286 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 C5AR1P21730 350 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 STK19P49842 368 aaPredicted RBP16.4■□□□□ 0.22
PLOD3-216ENST00000489927 CCR5P51681 352 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 CLDN6P56747 220 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 STIM1Q13586 685 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 DENND1BQ6P3S1 775 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 SND1Q7KZF4 910 aaKnown RBP eCLIP16.4■□□□□ 0.228e-15■■■■■ 39.9
PLOD3-216ENST00000489927 TMPRSS12Q86WS5 348 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 CHSY1Q86X52 802 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 PTPRN2Q92932 1015 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 CRELD1Q96HD1 420 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 DHTKD1Q96HY7 919 aaPredicted RBP16.4■□□□□ 0.22
PLOD3-216ENST00000489927 SERAC1Q96JX3 654 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 CNDP2Q96KP4 475 aaKnown RBP16.4■□□□□ 0.22
PLOD3-216ENST00000489927 KREMEN1Q96MU8 473 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 GTPBP4Q9BZE4 634 aaKnown RBP16.4■□□□□ 0.22
PLOD3-216ENST00000489927 GDF3Q9NR23 364 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 PCDHGA1Q9Y5H4 931 aa16.4■□□□□ 0.22
PLOD3-216ENST00000489927 GOLGA6L4A6NEF3 574 aa16.39■□□□□ 0.21
PLOD3-216ENST00000489927 PLK4O00444 970 aa16.39■□□□□ 0.21
PLOD3-216ENST00000489927 LDOC1O95751 146 aaPredicted RBP16.39■□□□□ 0.21
PLOD3-216ENST00000489927 ADH1BP00325 375 aa16.39■□□□□ 0.21
PLOD3-216ENST00000489927 IL1BP01584 269 aa16.39■□□□□ 0.21
PLOD3-216ENST00000489927 VAV1P15498 845 aa16.39■□□□□ 0.21
PLOD3-216ENST00000489927 TACR2P21452 398 aa16.39■□□□□ 0.21
PLOD3-216ENST00000489927 MZF1P28698 734 aaPredicted RBP16.39■□□□□ 0.21
PLOD3-216ENST00000489927 EPHA8P29322 1005 aaPredicted RBP16.39■□□□□ 0.21
PLOD3-216ENST00000489927 PPP2CBP62714 309 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms