RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 SLC47A2Q86VL8 602 aa20.06■□□□□ 0.8
TNFRSF1B-202ENST00000489921 CHSY1Q86X52 802 aa20.06■□□□□ 0.8
TNFRSF1B-202ENST00000489921 DHX40Q8IX18 779 aaKnown RBP20.06■□□□□ 0.8
TNFRSF1B-202ENST00000489921 PABPC3Q9H361 631 aaKnown RBP20.06■□□□□ 0.8
TNFRSF1B-202ENST00000489921 CLSTN2Q9H4D0 955 aa20.06■□□□□ 0.8
TNFRSF1B-202ENST00000489921 TM9SF3Q9HD45 589 aa20.06■□□□□ 0.8
TNFRSF1B-202ENST00000489921 OSGEPQ9NPF4 335 aa20.06■□□□□ 0.8
TNFRSF1B-202ENST00000489921 DNAJC12Q9UKB3 198 aa20.06■□□□□ 0.8
TNFRSF1B-202ENST00000489921 NEUROG3Q9Y4Z2 214 aa20.06■□□□□ 0.8
TNFRSF1B-202ENST00000489921 CABIN1Q9Y6J0 2220 aa20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 H0Y626 953 aa20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 GRAP2O75791 330 aa20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 ERBB2P04626 1255 aa20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 ZNF883P0CG24 379 aa20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 MTIF2P46199 727 aaKnown RBP20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 ST8SIA6P61647 398 aa20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 ECT2LQ008S8 904 aa20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 HNRNPDQ14103 355 aaKnown RBP20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 DPCR1Q3MIW9 517 aa20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 PTPN20Q4JDL3 420 aa20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 KCNT1Q5JUK3 1230 aa20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 EFHC1Q5JVL4 640 aa20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 OTUD1Q5VV17 481 aaPredicted RBP20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 USP30Q70CQ3 517 aa20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 CIR1Q86X95 450 aaPredicted RBP20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 CHCHD4Q8N4Q1 142 aa20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 ATP6V0D2Q8N8Y2 350 aa20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 C1orf131Q8NDD1 294 aaKnown RBP20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 SNX19Q92543 992 aa20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 PTPRN2Q92932 1015 aa20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 RPL10LQ96L21 214 aaKnown RBP20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 EBF2Q9HAK2 575 aa20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 SGK2Q9HBY8 427 aa20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 CHMP5Q9NZZ3 219 aa20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 PCOLCE2Q9UKZ9 415 aa20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 PLXNB3Q9ULL4 1909 aa20.05■□□□□ 0.8
TNFRSF1B-202ENST00000489921 TARSL2A2RTX5 802 aaKnown RBP20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 MZF1P28698 734 aaPredicted RBP20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 MATKP42679 507 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 NUMBP49757 651 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 STK19P49842 368 aaPredicted RBP20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 IRAK1P51617 712 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 AFF3P51826 1226 aaKnown RBP20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 CDK17Q00537 523 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 PTK2Q05397 1052 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 KCNMA1Q12791 1236 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 CST6Q15828 149 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 MAN2A1Q16706 1144 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 KIF19Q2TAC6 998 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 TTC31Q49AM3 519 aaPredicted RBP20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 CXorf57Q6NSI4 855 aaKnown RBP20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 FBXL22Q6P050 247 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 LAYNQ6UX15 382 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 FAM71AQ8IYT1 594 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 CCAR2Q8N163 923 aaKnown RBP20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 OR52K2Q8NGK3 314 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 BAHD1Q8TBE0 780 aaPredicted RBP20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 IGSF8Q969P0 613 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 ALG14Q96F25 216 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 NEUROG2Q9H2A3 272 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 NDST4Q9H3R1 872 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 PLCB1Q9NQ66 1216 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 TM7SF3Q9NS93 570 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 DDIT4Q9NX09 232 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 FBXL12Q9NXK8 326 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 ADAMTS1Q9UHI8 967 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 ZMIZ1Q9ULJ6 1067 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 SCML1Q9UN30 329 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 MSRB2Q9Y3D2 182 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 SNX11Q9Y5W9 270 aa20.04■□□□□ 0.8
TNFRSF1B-202ENST00000489921 ITPR1Q14643 2758 aa20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 PTPRBP23467 1997 aa20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 F5H5T6 163 aa20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 MID1O15344 667 aa20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 HSF2BPO75031 334 aa20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 FSBPO95073 299 aa20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 CD27P26842 260 aa20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 CCR1P32246 355 aa20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 PLK1P53350 603 aa20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 GALCP54803 685 aa20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 SLC6A3Q01959 620 aa20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 VWA3BQ502W6 1294 aa20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 OR6B2Q6IFH4 312 aa20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 IL27RAQ6UWB1 636 aa20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 C11orf57Q6ZUT1 292 aaPredicted RBP20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 SLC26A9Q7LBE3 791 aa20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 GLRX5Q86SX6 157 aa20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 MMAAQ8IVH4 418 aaKnown RBP20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 AADATQ8N5Z0 425 aa20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 FAM204AQ9H8W3 233 aa20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 ANLNQ9NQW6 1124 aa20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 ANKRD6Q9Y2G4 727 aa20.03■□□□□ 0.8
TNFRSF1B-202ENST00000489921 CELSR3Q9NYQ7 3312 aa20.02■□□□□ 0.8
TNFRSF1B-202ENST00000489921 SYNJ2BP-COX16A0A087WUM0 186 aa20.02■□□□□ 0.8
TNFRSF1B-202ENST00000489921 EDDM13A0A1B0GTR0 161 aa20.02■□□□□ 0.8
TNFRSF1B-202ENST00000489921 A0A1W2PP55 124 aa20.02■□□□□ 0.8
TNFRSF1B-202ENST00000489921 I6L893 689 aaPredicted RBP20.02■□□□□ 0.8
TNFRSF1B-202ENST00000489921 TRIM16O95361 564 aa20.02■□□□□ 0.8
TNFRSF1B-202ENST00000489921 CER1O95813 267 aa20.02■□□□□ 0.8
TNFRSF1B-202ENST00000489921 CAPNS1P04632 268 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms