RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 BBS12Q6ZW61 710 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 SLC44A2Q8IWA5 706 aaPredicted RBP3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 CEP57L1Q8IYX8 460 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 FAM109AQ8N4B1 249 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 FAM46DQ8NEK8 389 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 ZFPM2Q8WW38 1151 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 REEP2Q9BRK0 252 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 PCDHAC1Q9H158 963 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 OR10A4Q9H209 315 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 NDST4Q9H3R1 872 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 WDCPQ9H6R7 721 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 SERTAD4Q9NUC0 356 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 DECR2Q9NUI1 292 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 SEL1LQ9UBV2 794 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 TBK1Q9UHD2 729 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 FEZ2Q9UHY8 353 aaPredicted RBP3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 ZHX1Q9UKY1 873 aaPredicted RBP3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 ZDHHC8Q9ULC8 765 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 ZMYND8Q9ULU4 1186 aaPredicted RBP3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 PA2G4Q9UQ80 394 aaKnown RBP3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 CAMK2AQ9UQM7 478 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 PLB1Q6P1J6 1458 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 WDR91A4D1P6 747 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 THAP12O43422 761 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 GOSR1O95249 250 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 MT-ND3P03897 115 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 GNAI2P04899 355 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 PRKCBP05771 671 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 IGKV2-30P06310 120 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 HSP90AB1P08238 724 aaKnown RBP3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 PCSK6P29122 969 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 CIITAP33076 1130 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 CLCN2P51788 898 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 AP2B1P63010 937 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 VAMP2P63027 116 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 SP2Q02086 613 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 AP1B1Q10567 949 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 LRMPQ12912 555 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 FHL1Q13642 323 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 BMPR2Q13873 1038 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 GALNT17Q6IS24 598 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 MTFR2Q6P444 385 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 IL27RAQ6UWB1 636 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 TMEM108Q6UXF1 575 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 ZNF782Q6ZMW2 699 aaPredicted RBP3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 TTC39CQ8N584 583 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 SRBD1Q8N5C6 995 aaKnown RBP3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 AVL9Q8NBF6 648 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 KBTBD7Q8WVZ9 684 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 NCSTNQ92542 709 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 STAMQ92783 540 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 SPAG5Q96R06 1193 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 PHF7Q9BWX1 381 aaPredicted RBP3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 SIK2Q9H0K1 926 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 TMEM8AQ9HCN3 771 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 SARS2Q9NP81 518 aaKnown RBP3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 TRMT1Q9NXH9 659 aaKnown RBP3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 SERGEFQ9UGK8 458 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 HERC5Q9UII4 1024 aaKnown RBP3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 MID2Q9UJV3 735 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 ZNF215Q9UL58 517 aaPredicted RBP3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 MED16Q9Y2X0 877 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 KIAA0556O60303 1618 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 ARHGAP35Q9NRY4 1499 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 FLT1P17948 1338 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 SAMD9Q5K651 1589 aa3.46□□□□□ -1.86
DEPDC1-204ENST00000489862 FHOD3Q2V2M9 1422 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 UACAQ9BZF9 1416 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 TRIM64CA6NLI5 447 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 CHL1O00533 1208 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 ADAM20O43506 726 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 TMEM63AO94886 807 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 CSH1P0DML2 217 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 CSH2P0DML3 217 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 ATP6V1B1P15313 513 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 NPPBP16860 134 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 EGR1P18146 543 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 TM4SF1P30408 202 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 HPDP32754 393 aaPredicted RBP3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 ICAM3P32942 547 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 ZNF131P52739 623 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 ZNF134P52741 427 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 BCAT1P54687 386 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 NAP1L1P55209 391 aaKnown RBP3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 YBEYP58557 167 aaPredicted RBP3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 ACTR2P61160 394 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 ARF3P61204 181 aaPredicted RBP3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 TMF1P82094 1093 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 ARF1P84077 181 aaKnown RBP3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 DCTN2Q13561 401 aaKnown RBP3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 EIF4A2Q14240 407 aaKnown RBP3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 KCNAB1Q14722 419 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 GRM4Q14833 912 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 WTAPQ15007 396 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 PRICKLE4Q2TBC4 344 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 PLAC9Q5JTB6 97 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 TATDN1Q6P1N9 297 aa3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 SHQ1Q6PI26 577 aaKnown RBP3.45□□□□□ -1.86
DEPDC1-204ENST00000489862 MCM10Q7L590 875 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms