RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 LGI2Q8N0V4 545 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 CCNYQ8ND76 341 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 HTR3CQ8WXA8 447 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 ART4Q93070 314 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 CAVIN3Q969G5 261 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 PPP2R3CQ969Q6 453 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 WBP2Q969T9 261 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 TCEAL4Q96EI5 215 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 CELF6Q96J87 481 aaKnown RBP22.25■■□□□ 1.15
SMC4-221ENST00000489573 DDX50Q9BQ39 737 aaKnown RBP22.25■■□□□ 1.15
SMC4-221ENST00000489573 FERMT1Q9BQL6 677 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 TMEM248Q9NWD8 314 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 AGO1Q9UL18 857 aaKnown RBP22.25■■□□□ 1.15
SMC4-221ENST00000489573 SZT2Q5T011 3432 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 DENND4CQ5VZ89 1909 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 RFXAPO00287 272 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 DNALI1O14645 258 aaPredicted RBP22.25■■□□□ 1.15
SMC4-221ENST00000489573 NDC80O14777 642 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 MOSPD3O75425 235 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 AP1B1Q10567 949 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 TEAD2Q15562 447 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 C5orf22Q49AR2 442 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 ALFQ53S48 1182 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 GPR158Q5T848 1215 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 FBXO25Q8TCJ0 367 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 ADAMTS19Q8TE59 1207 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 HDAC11Q96DB2 347 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 FMO2Q99518 471 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 SLC46A2Q9BY10 475 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 PAK5Q9P286 719 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 CNTN5O94779 1100 aa22.24■■□□□ 1.15
SMC4-221ENST00000489573 FAM153BP0C7A2 387 aa22.24■■□□□ 1.15
SMC4-221ENST00000489573 GARSP41250 739 aaKnown RBP22.24■■□□□ 1.15
SMC4-221ENST00000489573 TNNT3P45378 269 aaPredicted RBP22.24■■□□□ 1.15
SMC4-221ENST00000489573 ITGA8P53708 1063 aa22.24■■□□□ 1.15
SMC4-221ENST00000489573 NRLP54845 237 aa22.24■■□□□ 1.15
SMC4-221ENST00000489573 RBM10P98175 930 aaKnown RBP22.24■■□□□ 1.15
SMC4-221ENST00000489573 CAV1Q03135 178 aa22.24■■□□□ 1.15
SMC4-221ENST00000489573 PPIDQ08752 370 aaKnown RBP22.24■■□□□ 1.15
SMC4-221ENST00000489573 FAM153CQ494X1 144 aa22.24■■□□□ 1.15
SMC4-221ENST00000489573 PRSS36Q5K4E3 855 aa22.24■■□□□ 1.15
SMC4-221ENST00000489573 ADGRF1Q5T601 910 aa22.24■■□□□ 1.15
SMC4-221ENST00000489573 AFMIDQ63HM1 303 aa22.24■■□□□ 1.15
SMC4-221ENST00000489573 CHRDL2Q6WN34 429 aa22.24■■□□□ 1.15
SMC4-221ENST00000489573 GRASPQ7Z6J2 395 aaPredicted RBP22.24■■□□□ 1.15
SMC4-221ENST00000489573 TFAP2DQ7Z6R9 452 aa22.24■■□□□ 1.15
SMC4-221ENST00000489573 ARHGAP12Q8IWW6 846 aa22.24■■□□□ 1.15
SMC4-221ENST00000489573 TASP1Q9H6P5 420 aa22.24■■□□□ 1.15
SMC4-221ENST00000489573 SFXN1Q9H9B4 322 aa22.24■■□□□ 1.15
SMC4-221ENST00000489573 NDFIP2Q9NV92 336 aa22.24■■□□□ 1.15
SMC4-221ENST00000489573 MTRF1LQ9UGC7 380 aaKnown RBP22.24■■□□□ 1.15
SMC4-221ENST00000489573 FAM153AQ9UHL3 310 aa22.24■■□□□ 1.15
SMC4-221ENST00000489573 STOML2Q9UJZ1 356 aa22.24■■□□□ 1.15
SMC4-221ENST00000489573 LSM7Q9UK45 103 aaKnown RBP22.24■■□□□ 1.15
SMC4-221ENST00000489573 MYO7AQ13402 2215 aa22.23■■□□□ 1.15
SMC4-221ENST00000489573 SOBPA7XYQ1 873 aa22.23■■□□□ 1.15
SMC4-221ENST00000489573 NTHL1P78549 312 aa22.23■■□□□ 1.15
SMC4-221ENST00000489573 ZXDBP98169 803 aa22.23■■□□□ 1.15
SMC4-221ENST00000489573 KCNC3Q14003 757 aa22.23■■□□□ 1.15
SMC4-221ENST00000489573 SLC5A9Q2M3M2 681 aa22.23■■□□□ 1.15
SMC4-221ENST00000489573 RABGAP1LQ5R372 815 aa22.23■■□□□ 1.15
SMC4-221ENST00000489573 RFWD3Q6PCD5 774 aa22.23■■□□□ 1.15
SMC4-221ENST00000489573 VN1R2Q8NFZ6 395 aa22.23■■□□□ 1.15
SMC4-221ENST00000489573 MYEOVQ96EZ4 313 aa22.23■■□□□ 1.15
SMC4-221ENST00000489573 P2RY11Q96G91 374 aa22.23■■□□□ 1.15
SMC4-221ENST00000489573 PIDD1Q9HB75 910 aa22.23■■□□□ 1.15
SMC4-221ENST00000489573 DZANK1Q9NVP4 752 aa22.23■■□□□ 1.15
SMC4-221ENST00000489573 ANAPC5Q9UJX4 755 aa22.23■■□□□ 1.15
SMC4-221ENST00000489573 TPX2Q9ULW0 747 aaKnown RBP22.23■■□□□ 1.15
SMC4-221ENST00000489573 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.22■■□□□ 1.15
SMC4-221ENST00000489573 C5orf60A6NFR6 353 aa22.22■■□□□ 1.15
SMC4-221ENST00000489573 DFFAO00273 331 aa22.22■■□□□ 1.15
SMC4-221ENST00000489573 ZNF197O14709 1029 aa22.22■■□□□ 1.15
SMC4-221ENST00000489573 GREM1O60565 184 aa22.22■■□□□ 1.15
SMC4-221ENST00000489573 GCATO75600 419 aa22.22■■□□□ 1.15
SMC4-221ENST00000489573 STK10O94804 968 aaKnown RBP22.22■■□□□ 1.15
SMC4-221ENST00000489573 PAPLNO95428 1278 aa22.22■■□□□ 1.15
SMC4-221ENST00000489573 MAPKAPK2P49137 400 aa22.22■■□□□ 1.15
SMC4-221ENST00000489573 RHBDF2Q6PJF5 856 aa22.22■■□□□ 1.15
SMC4-221ENST00000489573 C4orf22Q6V702 233 aa22.22■■□□□ 1.15
SMC4-221ENST00000489573 Q6ZNB5 142 aa22.22■■□□□ 1.15
SMC4-221ENST00000489573 UMODL1-AS1Q8N2C9 162 aa22.22■■□□□ 1.15
SMC4-221ENST00000489573 SMG7Q92540 1137 aaKnown RBP22.22■■□□□ 1.15
SMC4-221ENST00000489573 GDAP1L1Q96MZ0 367 aa22.22■■□□□ 1.15
SMC4-221ENST00000489573 SLC39A8Q9C0K1 460 aa22.22■■□□□ 1.15
SMC4-221ENST00000489573 ADAM7Q9H2U9 754 aa22.22■■□□□ 1.15
SMC4-221ENST00000489573 RETREG1Q9H6L5 497 aa22.22■■□□□ 1.15
SMC4-221ENST00000489573 ZNF446Q9NWS9 450 aa22.22■■□□□ 1.15
SMC4-221ENST00000489573 ARHGAP26Q9UNA1 814 aa22.22■■□□□ 1.15
SMC4-221ENST00000489573 SH3BP1Q9Y3L3 701 aa22.22■■□□□ 1.15
SMC4-221ENST00000489573 TP73O15350 636 aa22.21■■□□□ 1.15
SMC4-221ENST00000489573 NDST2P52849 883 aa22.21■■□□□ 1.15
SMC4-221ENST00000489573 ZNF33AQ06730 810 aa22.21■■□□□ 1.15
SMC4-221ENST00000489573 HIBCHQ6NVY1 386 aaPredicted RBP22.21■■□□□ 1.15
SMC4-221ENST00000489573 PCGF5Q86SE9 256 aa22.21■■□□□ 1.15
SMC4-221ENST00000489573 CIR1Q86X95 450 aaPredicted RBP22.21■■□□□ 1.15
SMC4-221ENST00000489573 CMTM8Q8IZV2 173 aa22.21■■□□□ 1.15
SMC4-221ENST00000489573 ATPAF2Q8N5M1 289 aa22.21■■□□□ 1.15
SMC4-221ENST00000489573 C12orf76Q8N812 135 aaPredicted RBP22.21■■□□□ 1.15
SMC4-221ENST00000489573 CCDC110Q8TBZ0 833 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms