RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 CCDC40Q4G0X9 1142 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 PITRM1Q5JRX3 1037 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 ZNF776Q68DI1 518 aaPredicted RBP12.18□□□□□ -0.46
ACTN4-206ENST00000489451 GJB7Q6PEY0 223 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 FOXR2Q6PJQ5 311 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 DHX40Q8IX18 779 aaKnown RBP12.18□□□□□ -0.46
ACTN4-206ENST00000489451 ELOA2Q8IYF1 753 aaPredicted RBP12.18□□□□□ -0.46
ACTN4-206ENST00000489451 APCDD1Q8J025 514 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 CARNMT1Q8N4J0 409 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 EHBP1Q8NDI1 1231 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 MDM1Q8TC05 714 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 SETD7Q8WTS6 366 aaKnown RBP12.18□□□□□ -0.46
ACTN4-206ENST00000489451 NELFBQ8WX92 580 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 SLC6A18Q96N87 628 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 UBL7Q96S82 380 aaPredicted RBP12.18□□□□□ -0.46
ACTN4-206ENST00000489451 SLC4A5Q9BY07 1137 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 FBRSQ9HAH7 460 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 CHMP5Q9NZZ3 219 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 KIAA1522Q9P206 1035 aaPredicted RBP12.18□□□□□ -0.46
ACTN4-206ENST00000489451 CTNND2Q9UQB3 1225 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 TLR6Q9Y2C9 796 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 COL5A1P20908 1838 aaPredicted RBP12.18□□□□□ -0.46
ACTN4-206ENST00000489451 A0A1W2PP55 124 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 BECN2A8MW95 431 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 E5RJQ4 531 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 FLRT2O43155 660 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 ARHGAP6O43182 974 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 C1QL1O75973 258 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 FBXO21O94952 628 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 LUC7L3O95232 432 aaKnown RBP12.17□□□□□ -0.46
ACTN4-206ENST00000489451 DNTTP04053 509 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 VAV1P15498 845 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 STK19P49842 368 aaPredicted RBP12.17□□□□□ -0.46
ACTN4-206ENST00000489451 IRAK1P51617 712 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 GALCP54803 685 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 STX17P56962 302 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 IL9RQ01113 521 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 APBA1Q02410 837 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 CAMK2BQ13554 666 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 TAF5Q15542 800 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 CST6Q15828 149 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 RAP1GAP2Q684P5 730 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 KIAA0895LQ68EN5 471 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 USP30Q70CQ3 517 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 BEND5Q7L4P6 421 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 TMPRSS7Q7RTY8 843 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 CIR1Q86X95 450 aaPredicted RBP12.17□□□□□ -0.46
ACTN4-206ENST00000489451 AADATQ8N5Z0 425 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 OR52K2Q8NGK3 314 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 IGSF8Q969P0 613 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 FAM149B1Q96BN6 582 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 SERPINB11Q96P15 392 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 MED15Q96RN5 788 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 FAM129BQ96TA1 746 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 PRMT1Q99873 361 aaKnown RBP12.17□□□□□ -0.46
ACTN4-206ENST00000489451 INTS2Q9H0H0 1204 aaKnown RBP12.17□□□□□ -0.46
ACTN4-206ENST00000489451 NEUROG2Q9H2A3 272 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 CCDC86Q9H6F5 360 aaKnown RBP12.17□□□□□ -0.46
ACTN4-206ENST00000489451 SGK2Q9HBY8 427 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 SUN2Q9UH99 717 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 SLCO3A1Q9UIG8 710 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 ERVW-1Q9UQF0 538 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 APC2O95996 2303 aa12.17□□□□□ -0.46
ACTN4-206ENST00000489451 A0A1W2PPC4 97 aa12.16□□□□□ -0.46
ACTN4-206ENST00000489451 J3QKU1 62 aa12.16□□□□□ -0.46
ACTN4-206ENST00000489451 BIN1O00499 593 aa12.16□□□□□ -0.46
ACTN4-206ENST00000489451 PCDHGA12O60330 932 aa12.16□□□□□ -0.46
ACTN4-206ENST00000489451 GADD45BO75293 160 aaPredicted RBP12.16□□□□□ -0.46
ACTN4-206ENST00000489451 MOCS2O96007 188 aaPredicted RBP12.16□□□□□ -0.46
ACTN4-206ENST00000489451 STIM1Q13586 685 aa12.16□□□□□ -0.46
ACTN4-206ENST00000489451 TTC31Q49AM3 519 aaPredicted RBP12.16□□□□□ -0.46
ACTN4-206ENST00000489451 ZC3H12AQ5D1E8 599 aaKnown RBP12.16□□□□□ -0.46
ACTN4-206ENST00000489451 PRAMEF14Q5SWL7 426 aa12.16□□□□□ -0.46
ACTN4-206ENST00000489451 NCEH1Q6PIU2 408 aa12.16□□□□□ -0.46
ACTN4-206ENST00000489451 TMEM110Q86TL2 294 aa12.16□□□□□ -0.46
ACTN4-206ENST00000489451 MMAAQ8IVH4 418 aaKnown RBP12.16□□□□□ -0.46
ACTN4-206ENST00000489451 LGI2Q8N0V4 545 aa12.16□□□□□ -0.46
ACTN4-206ENST00000489451 WDTC1Q8N5D0 677 aa12.16□□□□□ -0.46
ACTN4-206ENST00000489451 RHBDD1Q8TEB9 315 aa12.16□□□□□ -0.46
ACTN4-206ENST00000489451 ZNF606Q8WXB4 792 aa12.16□□□□□ -0.46
ACTN4-206ENST00000489451 SLC39A7Q92504 469 aa12.16□□□□□ -0.46
ACTN4-206ENST00000489451 GOLGA1Q92805 767 aa12.16□□□□□ -0.46
ACTN4-206ENST00000489451 PTPRN2Q92932 1015 aa12.16□□□□□ -0.46
ACTN4-206ENST00000489451 RPL10LQ96L21 214 aaKnown RBP12.16□□□□□ -0.46
ACTN4-206ENST00000489451 SCUBE2Q9NQ36 999 aa12.16□□□□□ -0.46
ACTN4-206ENST00000489451 ST7Q9NRC1 585 aa12.16□□□□□ -0.46
ACTN4-206ENST00000489451 FBXL12Q9NXK8 326 aa12.16□□□□□ -0.46
ACTN4-206ENST00000489451 ADAMTS1Q9UHI8 967 aa12.16□□□□□ -0.46
ACTN4-206ENST00000489451 AJAP1Q9UKB5 411 aaPredicted RBP12.16□□□□□ -0.46
ACTN4-206ENST00000489451 APOBEC2Q9Y235 224 aaKnown RBP12.16□□□□□ -0.46
ACTN4-206ENST00000489451 A0A1B0GTQ1 180 aa12.15□□□□□ -0.46
ACTN4-206ENST00000489451 A0A1W2PR77 199 aa12.15□□□□□ -0.46
ACTN4-206ENST00000489451 FAM149AA5PLN7 773 aa12.15□□□□□ -0.46
ACTN4-206ENST00000489451 FAM47DPA6NHR8 397 aa12.15□□□□□ -0.46
ACTN4-206ENST00000489451 GOLGA8CPA6NN73 597 aa12.15□□□□□ -0.46
ACTN4-206ENST00000489451 CBX4O00257 560 aa12.15□□□□□ -0.46
ACTN4-206ENST00000489451 VILLO15195 856 aa12.15□□□□□ -0.46
ACTN4-206ENST00000489451 AFPP02771 609 aaKnown RBP12.15□□□□□ -0.46
ACTN4-206ENST00000489451 ASLP04424 464 aa12.15□□□□□ -0.46
ACTN4-206ENST00000489451 TACR2P21452 398 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms