RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 RUFY3Q7L099 469 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 CEP97Q8IW35 865 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 UNC5BQ8IZJ1 945 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 THEM5Q8N1Q8 247 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 ZNF366Q8N895 744 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 TMEM145Q8NBT3 493 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 KCNB2Q92953 911 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 FEM1CQ96JP0 617 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 TAAR9Q96RI9 348 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 TTLL2Q9BWV7 592 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 TRIM55Q9BYV6 548 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 IL25Q9H293 177 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 MRPL40Q9NQ50 206 aaKnown RBP7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 BARHL2Q9NY43 387 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 PLK2Q9NYY3 685 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 PILRAQ9UKJ1 303 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 DMTF1Q9Y222 760 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 POLHQ9Y253 713 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 TNFSF13BQ9Y275 285 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 V9GY48 417 aaPredicted RBP7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 TCHHQ07283 1943 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 EPPK1P58107 5090 aaKnown RBP7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 CHD3Q12873 2000 aaKnown RBP7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 INAFM1C9JVW0 142 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 hCG_1984214I3L0E3 225 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 SMAPO00193 183 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 TPP1O14773 563 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 COCHO43405 550 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 STSP08842 583 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 HMGB1P09429 215 aaKnown RBP7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 CYP3A5P20815 502 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 NUDT1P36639 197 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 RABIFP47224 123 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 FOXM1Q08050 763 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 PPP2R5CQ13362 524 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 C16orf72Q14CZ0 275 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 ZBTB6Q15916 424 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 ECM1Q16610 540 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 ARHGAP44Q17R89 818 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 Q4G0T1 1027 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 CFAP221Q4G0U5 840 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 L1TD1Q5T7N2 865 aaKnown RBP7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 TMEM215Q68D42 235 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 TMTC3Q6ZXV5 915 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 ANKS1BQ7Z6G8 1248 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 PRPF39Q86UA1 669 aaKnown RBP7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 IQCKQ8N0W5 287 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 SDR16C5Q8N3Y7 309 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 ZNF808Q8N4W9 903 aaPredicted RBP7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 CISD2Q8N5K1 135 aaKnown RBP7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 ZNF713Q8N859 430 aaPredicted RBP7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 ETNPPLQ8TBG4 499 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 NRGNQ92686 78 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 BHMTQ93088 406 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 GTF3C6Q969F1 213 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 PIWIL1Q96J94 861 aaKnown RBP7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 SLC25A23Q9BV35 468 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 RSPH9Q9H1X1 276 aaPredicted RBP7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 RCOR3Q9P2K3 495 aaPredicted RBP7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 SMC3Q9UQE7 1217 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 B3GALT1Q9Y5Z6 326 aa7.84□□□□□ -1.15
EXOSC3-206ENST00000489414 FANCGO15287 622 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 MAP3K7O43318 606 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 DPM1O60762 260 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 RNASEH2AO75792 299 aaKnown RBP7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 RTN3O95197 1032 aaPredicted RBP7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 BAG4O95429 457 aaKnown RBP7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 ABL1P00519 1130 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 PAX3P23760 479 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 NFKBIAP25963 317 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 KIR3DL1P43629 444 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 GUCY2FP51841 1108 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 TSPY1Q01534 308 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 PDE4CQ08493 712 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 SEMA5AQ13591 1074 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 PDIA5Q14554 519 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 ARID5BQ14865 1188 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 CEBPEQ15744 281 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 TSGA10IPQ3SY00 556 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 POM121L1PQ3SYA9 428 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 ZNF568Q3ZCX4 644 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 ZNF542PQ5EBM4 170 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 CRB2Q5IJ48 1285 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 EFHC2Q5JST6 749 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 HTR3DQ70Z44 454 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 TMEM135Q86UB9 458 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 METTL23Q86XA0 190 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 SLITRK4Q8IW52 837 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 CCDC83Q8IWF9 413 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 SLC22A18ASQ8N1D0 253 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 RBMXL3Q8N7X1 1067 aaKnown RBP7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 OR6B3Q8NGW1 331 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 IGDCC4Q8TDY8 1250 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 UBE2Q2Q8WVN8 375 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 BSNDQ8WZ55 320 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 SPATA17Q96L03 361 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 PKMYT1Q99640 499 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 SPOCK3Q9BQ16 436 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 DSCC1Q9BVC3 393 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms