RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 SLC12A9Q9BXP2 914 aa15.67■□□□□ 0.1
UFD1-209ENST00000489406 CALN1Q9BXU9 219 aa15.67■□□□□ 0.1
UFD1-209ENST00000489406 ST6GALNAC4Q9H4F1 302 aa15.67■□□□□ 0.1
UFD1-209ENST00000489406 RP1P56715 2156 aa15.66■□□□□ 0.1
UFD1-209ENST00000489406 DOCK9Q9BZ29 2069 aa15.66■□□□□ 0.1
UFD1-209ENST00000489406 RP1L1Q8IWN7 2480 aaPredicted RBP15.66■□□□□ 0.1
UFD1-209ENST00000489406 EME2A4GXA9 379 aaPredicted RBP15.66■□□□□ 0.1
UFD1-209ENST00000489406 VWA3AA6NCI4 1184 aa15.66■□□□□ 0.1
UFD1-209ENST00000489406 NVLO15381 856 aaKnown RBP15.66■□□□□ 0.1
UFD1-209ENST00000489406 CCDC130P13994 396 aa15.66■□□□□ 0.1
UFD1-209ENST00000489406 ST8SIA6P61647 398 aa15.66■□□□□ 0.1
UFD1-209ENST00000489406 TMEM119Q4V9L6 283 aa15.66■□□□□ 0.1
UFD1-209ENST00000489406 C9orf64Q5T6V5 341 aa15.66■□□□□ 0.1
UFD1-209ENST00000489406 ZNF720Q7Z2F6 126 aa15.66■□□□□ 0.1
UFD1-209ENST00000489406 MAMDC2Q7Z304 686 aaPredicted RBP15.66■□□□□ 0.1
UFD1-209ENST00000489406 B3GNT8Q7Z7M8 397 aa15.66■□□□□ 0.1
UFD1-209ENST00000489406 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.66■□□□□ 0.1
UFD1-209ENST00000489406 FOXP1Q9H334 677 aaPredicted RBP15.66■□□□□ 0.1
UFD1-209ENST00000489406 PCIF1Q9H4Z3 704 aa15.66■□□□□ 0.1
UFD1-209ENST00000489406 PISDQ9UG56 409 aa15.66■□□□□ 0.1
UFD1-209ENST00000489406 A0A087X0B3 334 aa15.65■□□□□ 0.1
UFD1-209ENST00000489406 MUSKO15146 869 aa15.65■□□□□ 0.1
UFD1-209ENST00000489406 C5AR1P21730 350 aa15.65■□□□□ 0.1
UFD1-209ENST00000489406 CD70P32970 193 aa15.65■□□□□ 0.1
UFD1-209ENST00000489406 NUDT1P36639 197 aa15.65■□□□□ 0.1
UFD1-209ENST00000489406 EIF3IQ13347 325 aaKnown RBP15.65■□□□□ 0.1
UFD1-209ENST00000489406 SETMARQ53H47 684 aaPredicted RBP15.65■□□□□ 0.1
UFD1-209ENST00000489406 C1QL3Q5VWW1 255 aa15.65■□□□□ 0.1
UFD1-209ENST00000489406 CAPRIN2Q6IMN6 1127 aaKnown RBP15.65■□□□□ 0.1
UFD1-209ENST00000489406 TRAPPC11Q7Z392 1133 aa15.65■□□□□ 0.1
UFD1-209ENST00000489406 SCD5Q86SK9 330 aa15.65■□□□□ 0.1
UFD1-209ENST00000489406 TADA2BQ86TJ2 420 aa15.65■□□□□ 0.1
UFD1-209ENST00000489406 FAM129BQ96TA1 746 aa15.65■□□□□ 0.1
UFD1-209ENST00000489406 CBWD1Q9BRT8 395 aa15.65■□□□□ 0.1
UFD1-209ENST00000489406 CSNK1G1Q9HCP0 422 aa15.65■□□□□ 0.1
UFD1-209ENST00000489406 DNAJC28Q9NX36 388 aa15.65■□□□□ 0.1
UFD1-209ENST00000489406 UBE4BO95155 1302 aa15.65■□□□□ 0.1
UFD1-209ENST00000489406 PRAMEF33A0A0G2JMD5 474 aa15.64■□□□□ 0.09
UFD1-209ENST00000489406 AGRPO00253 132 aa15.64■□□□□ 0.09
UFD1-209ENST00000489406 PRAMEF10O60809 474 aa15.64■□□□□ 0.09
UFD1-209ENST00000489406 VPS4BO75351 444 aa15.64■□□□□ 0.09
UFD1-209ENST00000489406 JMJD7P0C870 316 aa15.64■□□□□ 0.09
UFD1-209ENST00000489406 PRPHP41219 470 aa15.64■□□□□ 0.09
UFD1-209ENST00000489406 TOB1P50616 345 aaPredicted RBP15.64■□□□□ 0.09
UFD1-209ENST00000489406 RSRC2Q7L4I2 434 aaKnown RBP15.64■□□□□ 0.09
UFD1-209ENST00000489406 FAM217AQ8IXS0 508 aa15.64■□□□□ 0.09
UFD1-209ENST00000489406 OR13H1Q8NG92 308 aa15.64■□□□□ 0.09
UFD1-209ENST00000489406 WFDC5Q8TCV5 224 aa15.64■□□□□ 0.09
UFD1-209ENST00000489406 SLC2A14Q8TDB8 520 aa15.64■□□□□ 0.09
UFD1-209ENST00000489406 JPH3Q8WXH2 748 aaPredicted RBP15.64■□□□□ 0.09
UFD1-209ENST00000489406 HVCN1Q96D96 273 aa15.64■□□□□ 0.09
UFD1-209ENST00000489406 NCKIPSDQ9NZQ3 722 aa15.64■□□□□ 0.09
UFD1-209ENST00000489406 VPS4AQ9UN37 437 aa15.64■□□□□ 0.09
UFD1-209ENST00000489406 EXOC7Q9UPT5 735 aa15.64■□□□□ 0.09
UFD1-209ENST00000489406 ADGRG4Q8IZF6 3080 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 TTC34A8MYJ7 566 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 PPP1R37O75864 691 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 CLDN1O95832 211 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 ADH1BP00325 375 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 IL1BP01584 269 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 PRKCGP05129 697 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 RALAP11233 206 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 GARTP22102 1010 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 DRD3P35462 400 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 MCM6Q14566 821 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 NR0B2Q15466 257 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 ME3Q16798 604 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 ACOT1Q86TX2 421 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 ZC3H18Q86VM9 953 aaKnown RBP15.63■□□□□ 0.09
UFD1-209ENST00000489406 DTX1Q86Y01 620 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 STK40Q8N2I9 435 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 WDR48Q8TAF3 677 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 TMA16Q96EY4 203 aaKnown RBP15.63■□□□□ 0.09
UFD1-209ENST00000489406 TNIP3Q96KP6 325 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 MRGPRX3Q96LB0 322 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 CCDC3Q9BQI4 270 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 FOXP3Q9BZS1 431 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 PREBQ9HCU5 417 aa15.63■□□□□ 0.09
UFD1-209ENST00000489406 TARSL2A2RTX5 802 aaKnown RBP15.62■□□□□ 0.09
UFD1-209ENST00000489406 WIPF3A6NGB9 483 aa15.62■□□□□ 0.09
UFD1-209ENST00000489406 SLC31A1O15431 190 aa15.62■□□□□ 0.09
UFD1-209ENST00000489406 REC8O95072 547 aa15.62■□□□□ 0.09
UFD1-209ENST00000489406 PRLRP16471 622 aa15.62■□□□□ 0.09
UFD1-209ENST00000489406 ITIH1P19827 911 aa15.62■□□□□ 0.09
UFD1-209ENST00000489406 PSEN1P49768 467 aa15.62■□□□□ 0.09
UFD1-209ENST00000489406 METAP1P53582 386 aa15.62■□□□□ 0.09
UFD1-209ENST00000489406 HNRNPKP61978 463 aaKnown RBP eCLIP15.62■□□□□ 0.094e-6■■■□□ 18
UFD1-209ENST00000489406 KLRB1Q12918 225 aa15.62■□□□□ 0.09
UFD1-209ENST00000489406 DEFB133Q30KQ1 61 aa15.62■□□□□ 0.09
UFD1-209ENST00000489406 TRIM69Q86WT6 500 aa15.62■□□□□ 0.09
UFD1-209ENST00000489406 SFR1Q86XK3 245 aa15.62■□□□□ 0.09
UFD1-209ENST00000489406 GPD1LQ8N335 351 aa15.62■□□□□ 0.09
UFD1-209ENST00000489406 ZNF276Q8N554 614 aa15.62■□□□□ 0.09
UFD1-209ENST00000489406 TMEM145Q8NBT3 493 aa15.62■□□□□ 0.09
UFD1-209ENST00000489406 ZNF548Q8NEK5 533 aaPredicted RBP15.62■□□□□ 0.09
UFD1-209ENST00000489406 KLK6Q92876 244 aa15.62■□□□□ 0.09
UFD1-209ENST00000489406 MOCOSQ96EN8 888 aa15.62■□□□□ 0.09
UFD1-209ENST00000489406 ABHD17AQ96GS6 310 aa15.62■□□□□ 0.09
UFD1-209ENST00000489406 C8orf76Q96K31 380 aa15.62■□□□□ 0.09
UFD1-209ENST00000489406 NOX5Q96PH1 765 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms