RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 EDDM13A0A1B0GTR0 161 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 C4orf47A7E2U8 309 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 SRGAP2O75044 1071 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 IGLV3-25P01717 112 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 CHRM1P11229 460 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-232ENST00000489053 CDH5P33151 784 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-232ENST00000489053 RDXP35241 583 aaKnown RBP9.41□□□□□ -0.9
HDAC6-232ENST00000489053 LIMK1P53667 647 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 PITX1P78337 314 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-232ENST00000489053 KRT83P78385 493 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 CAMK2GQ13555 558 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-232ENST00000489053 AUHQ13825 339 aaKnown RBP9.41□□□□□ -0.9
HDAC6-232ENST00000489053 CDO1Q16878 200 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 HNRNPA1L2Q32P51 320 aaKnown RBP9.41□□□□□ -0.9
HDAC6-232ENST00000489053 PLEKHG6Q3KR16 790 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 C2CD6Q53TS8 623 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 PPM1JQ5JR12 505 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 C6orf118Q5T5N4 469 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 TMEM215Q68D42 235 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 PPP1R2P3Q6NXS1 205 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 FBXL22Q6P050 247 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 METTL3Q86U44 580 aaKnown RBP9.41□□□□□ -0.9
HDAC6-232ENST00000489053 CIR1Q86X95 450 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-232ENST00000489053 DHX40Q8IX18 779 aaKnown RBP9.41□□□□□ -0.9
HDAC6-232ENST00000489053 WFDC5Q8TCV5 224 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 SLC20A1Q8WUM9 679 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 P2RY11Q96G91 374 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 CCDC114Q96M63 670 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 TBCBQ99426 244 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 BPIFA3Q9BQP9 254 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 C11orf70Q9BRQ4 267 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 C2orf49Q9BVC5 232 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-232ENST00000489053 BTBD1Q9H0C5 482 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 SLC32A1Q9H598 525 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 ITM2CQ9NQX7 267 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 METTL5Q9NRN9 209 aaKnown RBP9.41□□□□□ -0.9
HDAC6-232ENST00000489053 PIGVQ9NUD9 493 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 EVLQ9UI08 416 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-232ENST00000489053 XPO7Q9UIA9 1087 aaKnown RBP9.41□□□□□ -0.9
HDAC6-232ENST00000489053 SCML1Q9UN30 329 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 SLC6A14Q9UN76 642 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 ERVW-1Q9UQF0 538 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 FARP1Q9Y4F1 1045 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-232ENST00000489053 MYOFQ9NZM1 2061 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 LNP1A1A4G5 178 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 SYCE3A1L190 88 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 TARSL2A2RTX5 802 aaKnown RBP9.4□□□□□ -0.9
HDAC6-232ENST00000489053 FAM47DPA6NHR8 397 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 PATE3B3GLJ2 98 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 BNIP3LO60238 219 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 RNASEH2AO75792 299 aaKnown RBP9.4□□□□□ -0.9
HDAC6-232ENST00000489053 ADCY5O95622 1261 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 TPM3P06753 285 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 RHOCP08134 193 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 KRT3P12035 628 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 ATP1A3P13637 1013 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 GABRB2P47870 512 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 PSMD8P48556 350 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 CXCR3P49682 368 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 CDH4P55283 916 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 JAM2P57087 298 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 NOMO3P69849 1222 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 ATP11AP98196 1134 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 CENPCQ03188 943 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 ENPP2Q13822 863 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 TEAD4Q15561 434 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 ASIC2Q16515 512 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 RWDD4Q6NW29 188 aaKnown RBP9.4□□□□□ -0.9
HDAC6-232ENST00000489053 DNAJC24Q6P3W2 148 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 DCUN1D2Q6PH85 259 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 ADAT2Q7Z6V5 191 aaKnown RBP9.4□□□□□ -0.9
HDAC6-232ENST00000489053 PHLDB2Q86SQ0 1253 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 FAM131BQ86XD5 332 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 ZNF354CQ86Y25 554 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 KDM1BQ8NB78 822 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 CADM4Q8NFZ8 388 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 SLC30A5Q8TAD4 765 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 TTC17Q96AE7 1141 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 RPL10LQ96L21 214 aaKnown RBP9.4□□□□□ -0.9
HDAC6-232ENST00000489053 CFAP57Q96MR6 1250 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 ERGIC2Q96RQ1 377 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 AGPAT1Q99943 283 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 TMEM245Q9H330 911 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 PRSS16Q9NQE7 514 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 WSB2Q9NYS7 404 aaPredicted RBP9.4□□□□□ -0.9
HDAC6-232ENST00000489053 USP36Q9P275 1121 aaKnown RBP9.4□□□□□ -0.9
HDAC6-232ENST00000489053 NOCTQ9UK39 431 aaKnown RBP9.4□□□□□ -0.9
HDAC6-232ENST00000489053 PILRBQ9UKJ0 227 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 SIK3Q9Y2K2 1263 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 HS3ST4Q9Y661 456 aa9.4□□□□□ -0.9
HDAC6-232ENST00000489053 LRRC72A6NJI9 287 aa9.39□□□□□ -0.91
HDAC6-232ENST00000489053 TTC34A8MYJ7 566 aa9.39□□□□□ -0.91
HDAC6-232ENST00000489053 OPHN1O60890 802 aa9.39□□□□□ -0.91
HDAC6-232ENST00000489053 SIN3BO75182 1162 aa9.39□□□□□ -0.91
HDAC6-232ENST00000489053 FSBPO95073 299 aa9.39□□□□□ -0.91
HDAC6-232ENST00000489053 SEMA4FO95754 770 aa9.39□□□□□ -0.91
HDAC6-232ENST00000489053 ADH1BP00325 375 aa9.39□□□□□ -0.91
HDAC6-232ENST00000489053 IL1BP01584 269 aa9.39□□□□□ -0.91
HDAC6-232ENST00000489053 SERPINF2P08697 491 aa9.39□□□□□ -0.91
HDAC6-232ENST00000489053 ENGP17813 658 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms