RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 PRKCHP24723 683 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 PRKCIP41743 596 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 PTPN9P43378 593 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 DHPSP49366 369 aaPredicted RBP14.72□□□□□ -0.05
BRCA1-218ENST00000489037 CDH4P55283 916 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 CREB5Q02930 508 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 MAP7D1Q3KQU3 841 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 PLEKHG6Q3KR16 790 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 CCDC14Q49A88 953 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 TDRD12Q587J7 1177 aaKnown RBP14.72□□□□□ -0.05
BRCA1-218ENST00000489037 PMS2CLQ68D20 193 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 MON1BQ7L1V2 547 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 STRADAQ7RTN6 431 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 CIR1Q86X95 450 aaPredicted RBP14.72□□□□□ -0.05
BRCA1-218ENST00000489037 FAM131BQ86XD5 332 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 TMPRSS6Q8IU80 811 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 MCOLN2Q8IZK6 566 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 OR2T3Q8NH03 318 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 JOSD2Q8TAC2 188 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 CPLX3Q8WVH0 158 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 IGSF8Q969P0 613 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 SIPA1Q96FS4 1042 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 LMLNQ96KR4 655 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 MRGPRX1Q96LB2 322 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 TTYH3Q9C0H2 523 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 LUC7L2Q9Y383 392 aaKnown RBP14.72□□□□□ -0.05
BRCA1-218ENST00000489037 DMDP11532 3685 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 USP34Q70CQ2 3546 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 RNASEH1O60930 286 aaKnown RBP14.71□□□□□ -0.05
BRCA1-218ENST00000489037 GZMAP12544 262 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 HLA-EP13747 358 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 SDHBP21912 280 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 BCKDHBP21953 392 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 RFC1P35251 1148 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-218ENST00000489037 GGCXP38435 758 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 DPP6P42658 865 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 ATXN1P54253 815 aaKnown RBP14.71□□□□□ -0.05
BRCA1-218ENST00000489037 ZBED6P86452 979 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 ECT2LQ008S8 904 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 LMNB2Q03252 620 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 CSRP2Q16527 193 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 C15orf59Q2T9L4 293 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-218ENST00000489037 C5orf22Q49AR2 442 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 SPDYCQ5MJ68 293 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 TRNP1Q6NT89 227 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 WDR59Q6PJI9 974 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 ZNF571Q7Z3V5 609 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-218ENST00000489037 CYP2U1Q7Z449 544 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 C14orf80Q86SX3 495 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 METTL3Q86U44 580 aaKnown RBP14.71□□□□□ -0.05
BRCA1-218ENST00000489037 C12orf50Q8NA57 414 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-218ENST00000489037 KDM1BQ8NB78 822 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 FAM172AQ8WUF8 416 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 SYN2Q92777 582 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-218ENST00000489037 TRIM11Q96F44 468 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.71□□□□□ -0.05
BRCA1-218ENST00000489037 ADAM33Q9BZ11 813 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 TMEM245Q9H330 911 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 SEMA4GQ9NTN9 838 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 PARVAQ9NVD7 372 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 SLC25A13Q9UJS0 675 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 INTS6Q9UL03 887 aaKnown RBP14.71□□□□□ -0.05
BRCA1-218ENST00000489037 CYP8B1Q9UNU6 501 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 ERVW-1Q9UQF0 538 aa14.71□□□□□ -0.05
BRCA1-218ENST00000489037 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 PRR5-ARHGAP8B1AHC4 643 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 E9PAM4 449 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 SRGAP2O75044 1071 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 RTN2O75298 545 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 GJB6O95452 261 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 RHOCP08134 193 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 TPM1P09493 284 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 SKILP12757 684 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 RRM1P23921 792 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 OXTRP30559 389 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 MPLP40238 635 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 PBX1P40424 430 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 PLK1P53350 603 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 ARHGAP8P85298 464 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 RPL6Q02878 288 aaKnown RBP14.7□□□□□ -0.06
BRCA1-218ENST00000489037 SFSWAPQ12872 951 aaKnown RBP14.7□□□□□ -0.06
BRCA1-218ENST00000489037 CAMK2GQ13555 558 aaPredicted RBP14.7□□□□□ -0.06
BRCA1-218ENST00000489037 PTPRNQ16849 979 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 C6orf118Q5T5N4 469 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 BNIPLQ7Z465 357 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 TMEFF1Q8IYR6 380 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 APCDD1Q8J025 514 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 ZNF366Q8N895 744 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 MCEEQ96PE7 176 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 XPO4Q9C0E2 1151 aaKnown RBP14.7□□□□□ -0.06
BRCA1-218ENST00000489037 MUC3BQ9H195 1237 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 CD248Q9HCU0 757 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 VPS45Q9NRW7 570 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 VPS28Q9UK41 221 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 CAPN11Q9UMQ6 739 aa14.7□□□□□ -0.06
BRCA1-218ENST00000489037 ITIH6Q6UXX5 1313 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 IGHV1OR15-9A0A0B4J2B8 117 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 DRGXA6NNA5 263 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 FTLP02792 175 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-218ENST00000489037 DNTTP04053 509 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms