RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 POF1BQ8WVV4 589 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 ADAD1Q96M93 576 aaKnown RBP4.12□□□□□ -1.75
RFC4-213ENST00000489028 RMDN3Q96TC7 470 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 HTATIP2Q9BUP3 242 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 ARHGAP39Q9C0H5 1083 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 PABPC3Q9H361 631 aaKnown RBP4.12□□□□□ -1.75
RFC4-213ENST00000489028 LRFN1Q9P244 771 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 RCE1Q9Y256 329 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 SQORQ9Y6N5 450 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 MBD3L5A6NJ08 208 aaPredicted RBP4.11□□□□□ -1.75
RFC4-213ENST00000489028 B4DGG1 531 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 PRPF4O43172 522 aaKnown RBP eCLIP4.11□□□□□ -1.75
RFC4-213ENST00000489028 LARGE1O95461 756 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 CRYABP02511 175 aaKnown RBP4.11□□□□□ -1.75
RFC4-213ENST00000489028 ITGA2BP08514 1039 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 POLGP54098 1239 aaPredicted RBP4.11□□□□□ -1.75
RFC4-213ENST00000489028 ZBTB16Q05516 673 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 MAPK7Q13164 816 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 DLGAP5Q15398 846 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 ZNF569Q5MCW4 686 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 MANEAQ5SRI9 462 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 C6orf10Q5SRN2 563 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 TTC22Q5TAA0 569 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 TMEM88Q6PEY1 159 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 LRIG3Q6UXM1 1119 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 B4GALNT4Q76KP1 1039 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 PIM3Q86V86 326 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 CACNA2D3Q8IZS8 1091 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 MPHOSPH6Q99547 160 aaKnown RBP4.11□□□□□ -1.75
RFC4-213ENST00000489028 WDR83Q9BRX9 315 aaKnown RBP4.11□□□□□ -1.75
RFC4-213ENST00000489028 TMEM120AQ9BXJ8 343 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 FRMD8Q9BZ67 464 aaPredicted RBP4.11□□□□□ -1.75
RFC4-213ENST00000489028 FAM234AQ9H0X4 552 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 ABHD16BQ9H3Z7 469 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 EBF3Q9H4W6 596 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 GRHPRQ9UBQ7 328 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 HERC5Q9UII4 1024 aaKnown RBP4.11□□□□□ -1.75
RFC4-213ENST00000489028 SLC8A2Q9UPR5 921 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 PCDHA10Q9Y5I2 948 aa4.11□□□□□ -1.75
RFC4-213ENST00000489028 ZNF335Q9H4Z2 1342 aaPredicted RBP4.11□□□□□ -1.75
RFC4-213ENST00000489028 FAM90A10PA6NDY2 464 aa4.1□□□□□ -1.75
RFC4-213ENST00000489028 MYMKA6NI61 221 aa4.1□□□□□ -1.75
RFC4-213ENST00000489028 FOXO6A8MYZ6 492 aa4.1□□□□□ -1.75
RFC4-213ENST00000489028 MCIDASD6RGH6 385 aa4.1□□□□□ -1.75
RFC4-213ENST00000489028 F5H423 210 aaPredicted RBP4.1□□□□□ -1.75
RFC4-213ENST00000489028 NEURL1O76050 574 aa4.1□□□□□ -1.75
RFC4-213ENST00000489028 NFATC1O95644 943 aa4.1□□□□□ -1.75
RFC4-213ENST00000489028 CSTBP04080 98 aaKnown RBP4.1□□□□□ -1.75
RFC4-213ENST00000489028 HOXB2P14652 356 aa4.1□□□□□ -1.75
RFC4-213ENST00000489028 ITGB6P18564 788 aa4.1□□□□□ -1.75
RFC4-213ENST00000489028 CIITAP33076 1130 aa4.1□□□□□ -1.75
RFC4-213ENST00000489028 RCAN1P53805 252 aa4.1□□□□□ -1.75
RFC4-213ENST00000489028 ADPRHP54922 357 aa4.1□□□□□ -1.75
RFC4-213ENST00000489028 ICA1Q05084 483 aa4.1□□□□□ -1.75
RFC4-213ENST00000489028 PRTGQ2VWP7 1150 aa4.1□□□□□ -1.75
RFC4-213ENST00000489028 ATPAF1Q5TC12 328 aaPredicted RBP4.1□□□□□ -1.75
RFC4-213ENST00000489028 ISM2Q6H9L7 571 aa4.1□□□□□ -1.75
RFC4-213ENST00000489028 HMBOX1Q6NT76 420 aa4.1□□□□□ -1.75
RFC4-213ENST00000489028 NFRKBQ6P4R8 1299 aa4.1□□□□□ -1.75
RFC4-213ENST00000489028 GPSM1Q86YR5 675 aa4.1□□□□□ -1.75
RFC4-213ENST00000489028 FAM110DQ8TAY7 271 aaPredicted RBP4.1□□□□□ -1.75
RFC4-213ENST00000489028 NSMCE1Q8WV22 266 aa4.1□□□□□ -1.75
RFC4-213ENST00000489028 NLRP4Q96MN2 994 aa4.1□□□□□ -1.75
RFC4-213ENST00000489028 DECR2Q9NUI1 292 aa4.1□□□□□ -1.75
RFC4-213ENST00000489028 LIN7CQ9NUP9 197 aaKnown RBP4.1□□□□□ -1.75
RFC4-213ENST00000489028 DACT1Q9NYF0 836 aa4.1□□□□□ -1.75
RFC4-213ENST00000489028 DPPA5A6NC42 116 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 KCNJ18B7U540 433 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 VEGFAP15692 232 aaPredicted RBP4.09□□□□□ -1.75
RFC4-213ENST00000489028 SCP2P22307 547 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 PRPH2P23942 346 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 ALDH7A1P49419 539 aaKnown RBP4.09□□□□□ -1.75
RFC4-213ENST00000489028 CDK7P50613 346 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 RHBDL3P58872 404 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 AP2B1P63010 937 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 GAD2Q05329 585 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 BRD3Q15059 726 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 KLHL17Q6TDP4 642 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 C9orf47Q6ZRZ4 202 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 RRAGAQ7L523 313 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 RAB11FIP2Q7L804 512 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 SAMD14Q8IZD0 417 aaPredicted RBP4.09□□□□□ -1.75
RFC4-213ENST00000489028 TMEM199Q8N511 208 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 SAMD3Q8N6K7 520 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 TMEM217Q8N7C4 229 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 SLC2A12Q8TD20 617 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 ASB5Q8WWX0 329 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 INPP5DQ92835 1189 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 CLMNQ96JQ2 1002 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 NPAS1Q99742 590 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 HDHD5Q9BXW7 423 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 MAGEH1Q9H213 219 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 ELAC1Q9H777 363 aaKnown RBP4.09□□□□□ -1.75
RFC4-213ENST00000489028 MAP6D1Q9H9H5 199 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 ZNF304Q9HCX3 659 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 C19orf53Q9UNZ5 99 aaPredicted RBP4.09□□□□□ -1.75
RFC4-213ENST00000489028 DTX4Q9Y2E6 619 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 PKP3Q9Y446 797 aa4.09□□□□□ -1.75
RFC4-213ENST00000489028 FAM90A20PA6NIJ5 464 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 GRM8O00222 908 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms