RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 TIGD1Q96MW7 591 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 NELL2Q99435 816 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 MESP1Q9BRJ9 268 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 PTDSS2Q9BVG9 487 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 SARGQ9BW04 601 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 RNF26Q9BY78 433 aaPredicted RBP3.16□□□□□ -1.9
CALD1-221ENST00000489019 FOXP1Q9H334 677 aaPredicted RBP3.16□□□□□ -1.9
CALD1-221ENST00000489019 TTC12Q9H892 705 aaPredicted RBP3.16□□□□□ -1.9
CALD1-221ENST00000489019 VPS54Q9P1Q0 977 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.16□□□□□ -1.9
CALD1-221ENST00000489019 SERGEFQ9UGK8 458 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 DDX20Q9UHI6 824 aaKnown RBP3.16□□□□□ -1.9
CALD1-221ENST00000489019 NDRG4Q9ULP0 352 aaKnown RBP3.16□□□□□ -1.9
CALD1-221ENST00000489019 MRPS17Q9Y2R5 130 aaKnown RBP3.16□□□□□ -1.9
CALD1-221ENST00000489019 CHD4Q14839 1912 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 MYH13Q9UKX3 1938 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 THSD7AQ9UPZ6 1657 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 DUOX1Q9NRD9 1551 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 MROH7-TTC4A0A0A0MT08 1334 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 FRMPD2Q68DX3 1309 aaPredicted RBP3.16□□□□□ -1.9
CALD1-221ENST00000489019 TAF1P21675 1872 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 MAST2Q6P0Q8 1798 aa3.15□□□□□ -1.9
CALD1-221ENST00000489019 NID2Q14112 1375 aa3.15□□□□□ -1.9
CALD1-221ENST00000489019 COL4A1P02462 1669 aa3.15□□□□□ -1.9
CALD1-221ENST00000489019 A0A087WWL8 130 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 A0A087WWV3 80 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 UQCRHLA0A096LP55 91 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 A0A1W2PPL8 197 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 TMEM233B4DJY2 109 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 H0YIZ8 118 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 UBE2Q2LH0YL09 131 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 GCOM1H8Y6P7 765 aaPredicted RBP3.15□□□□□ -1.91
CALD1-221ENST00000489019 SMIM22K7EJ46 135 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 AP5Z1O43299 807 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 NEMFO60524 1076 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 NMT2O60551 498 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 CTNND1O60716 968 aaKnown RBP3.15□□□□□ -1.91
CALD1-221ENST00000489019 BBOX1O75936 387 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 BMP15O95972 392 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 FESP07332 822 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 UQCRHP07919 91 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 MYL3P08590 195 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 IL6RP08887 468 aaPredicted RBP3.15□□□□□ -1.91
CALD1-221ENST00000489019 SCG2P13521 617 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 CALML3P27482 149 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 PPIFP30405 207 aaKnown RBP3.15□□□□□ -1.91
CALD1-221ENST00000489019 NT5C2P49902 561 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 CCT8P50990 548 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 RBM6P78332 1123 aaKnown RBP3.15□□□□□ -1.91
CALD1-221ENST00000489019 TFF2Q03403 129 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 FOXF2Q12947 444 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 PNOCQ13519 176 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 TPD52L1Q16890 204 aaPredicted RBP3.15□□□□□ -1.91
CALD1-221ENST00000489019 TREML2Q5T2D2 321 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 ZNF618Q5T7W0 954 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 C12orf60Q5U649 245 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 RESP18Q5W5W9 173 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 RGS7BPQ6MZT1 257 aaPredicted RBP3.15□□□□□ -1.91
CALD1-221ENST00000489019 SHC4Q6S5L8 630 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 KRBA2Q6ZNG9 492 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 PIK3AP1Q6ZUJ8 805 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 TMTC3Q6ZXV5 915 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 MAEAQ7L5Y9 396 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 ZNF551Q7Z340 670 aaPredicted RBP3.15□□□□□ -1.91
CALD1-221ENST00000489019 PLA2G4DQ86XP0 818 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 SRBD1Q8N5C6 995 aaKnown RBP3.15□□□□□ -1.91
CALD1-221ENST00000489019 SLC15A4Q8N697 577 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 DNAJC5GQ8N7S2 189 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 PDILTQ8N807 584 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 CCDC148Q8NFR7 591 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 RASSF8Q8NHQ8 419 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 IL31RAQ8NI17 732 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 PARD3BQ8TEW8 1205 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 TBC1D22AQ8WUA7 517 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 UBE2Q2Q8WVN8 375 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 KBTBD7Q8WVZ9 684 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 ATRIPQ8WXE1 791 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 MAML1Q92585 1016 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 SMARCE1Q969G3 411 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 ZNF622Q969S3 477 aaKnown RBP eCLIP3.15□□□□□ -1.91
CALD1-221ENST00000489019 DHX58Q96C10 678 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 DYNLL2Q96FJ2 89 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 EYA3Q99504 573 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 NAP1L4Q99733 375 aaKnown RBP3.15□□□□□ -1.91
CALD1-221ENST00000489019 DPH1Q9BZG8 443 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 MAF1Q9H063 256 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 CXorf36Q9H7Y0 433 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 SMURF2Q9HAU4 748 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 CD209Q9NNX6 404 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 ARHGEF3Q9NR81 526 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 SEC63Q9UGP8 760 aaKnown RBP3.15□□□□□ -1.91
CALD1-221ENST00000489019 STX8Q9UNK0 236 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 TMX2Q9Y320 296 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 TNFRSF18Q9Y5U5 241 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 LY75O60449 1722 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 COL24A1Q17RW2 1714 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 CACNA1SQ13698 1873 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 CCDC88AQ3V6T2 1871 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 LAMB1P07942 1786 aa3.15□□□□□ -1.91
CALD1-221ENST00000489019 ECM29Q5VYK3 1845 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms