RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 K7EQS6 105 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 NPC1O15118 1278 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 CREB3O43889 395 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 BUB1BO60566 1050 aaPredicted RBP16.43■□□□□ 0.22
HDAC7-224ENST00000488927 ATG13O75143 517 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 RARAP10276 462 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 IL1R2P27930 398 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 EPHB2P29323 1055 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 OR1E1P30953 314 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 HCAR3P49019 387 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 MAPKAPK2P49137 400 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 NUBP1P53384 320 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 TPI1P60174 286 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 MRPS21P82921 87 aaKnown RBP16.43■□□□□ 0.22
HDAC7-224ENST00000488927 FZD5Q13467 585 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 FAM72AQ5TYM5 149 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 DAB2IPQ5VWQ8 1189 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 FAM72DQ6L9T8 149 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 ZNF783Q6ZMS7 281 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 ZNF662Q6ZS27 426 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 CYP4V2Q6ZWL3 525 aaPredicted RBP16.43■□□□□ 0.22
HDAC7-224ENST00000488927 TRMT11Q7Z4G4 463 aaKnown RBP16.43■□□□□ 0.22
HDAC7-224ENST00000488927 KIAA0907Q7Z7F0 614 aaPredicted RBP16.43■□□□□ 0.22
HDAC7-224ENST00000488927 FAM72BQ86X60 149 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 CIR1Q86X95 450 aaPredicted RBP16.43■□□□□ 0.22
HDAC7-224ENST00000488927 MAP7D3Q8IWC1 876 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 PYROXD2Q8N2H3 581 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 RNF10Q8N5U6 811 aaKnown RBP16.43■□□□□ 0.22
HDAC7-224ENST00000488927 TPCN2Q8NHX9 752 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 CHRDQ9H2X0 955 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.43■□□□□ 0.22
HDAC7-224ENST00000488927 TFR2Q9UP52 801 aa16.43■□□□□ 0.22
HDAC7-224ENST00000488927 H3BRJ5 948 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 EEF2KO00418 725 aaKnown RBP16.42■□□□□ 0.22
HDAC7-224ENST00000488927 TRIM24O15164 1050 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 SPOPO43791 374 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 CNTN5O94779 1100 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 ATP5BP06576 529 aaKnown RBP16.42■□□□□ 0.22
HDAC7-224ENST00000488927 ETFBP38117 255 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 ARL4AP40617 200 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 LMAN2Q12907 356 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 PDK2Q15119 407 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 GEN1Q17RS7 908 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 SMTNL2Q2TAL5 461 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 ALFQ53S48 1182 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 PPP6R3Q5H9R7 873 aaPredicted RBP16.42■□□□□ 0.22
HDAC7-224ENST00000488927 KCNT1Q5JUK3 1230 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 DAAM2Q86T65 1068 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 RHOT1Q8IXI2 618 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 SYCE1Q8N0S2 351 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 HSPH1Q92598 858 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 ACDQ96AP0 544 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 LMLNQ96KR4 655 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 TMEM248Q9NWD8 314 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 GPATCH2LQ9NWQ4 482 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 MPP6Q9NZW5 540 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 RCOR3Q9P2K3 495 aaPredicted RBP16.42■□□□□ 0.22
HDAC7-224ENST00000488927 ALG6Q9Y672 507 aa16.42■□□□□ 0.22
HDAC7-224ENST00000488927 ILVBLA1L0T0 632 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 WASH4PA8MWX3 477 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 CHURC1-FNTBB4DL54 471 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 DAPK3O43293 454 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 BUB1O43683 1085 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 RNF40O75150 1001 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 ASLP04424 464 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 DCNP07585 359 aaKnown RBP16.41■□□□□ 0.22
HDAC7-224ENST00000488927 RHOCP08134 193 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 TCF4P15884 667 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 POLR2EP19388 210 aaKnown RBP16.41■□□□□ 0.22
HDAC7-224ENST00000488927 COMTP21964 271 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 CD70P32970 193 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 IRAK1P51617 712 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 PLK1P53350 603 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 SULT2A1Q06520 285 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 MESP2Q0VG99 397 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 KRT81Q14533 505 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 CA9Q16790 459 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 FSCBQ5H9T9 825 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 ARTNQ5T4W7 220 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 CXorf57Q6NSI4 855 aaKnown RBP16.41■□□□□ 0.22
HDAC7-224ENST00000488927 MAMSTRQ6ZN01 415 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 RFX8Q6ZV50 586 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 TFAP2DQ7Z6R9 452 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 NLRP14Q86W24 1093 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 SPEM1Q8N4L4 309 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 RTL3Q8N8U3 475 aaKnown RBP16.41■□□□□ 0.22
HDAC7-224ENST00000488927 WFDC5Q8TCV5 224 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 UBE2Q2Q8WVN8 375 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 EZH1Q92800 747 aaPredicted RBP16.41■□□□□ 0.22
HDAC7-224ENST00000488927 KCTD15Q96SI1 283 aaPredicted RBP16.41■□□□□ 0.22
HDAC7-224ENST00000488927 CIPCQ9C0C6 399 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 RBM12Q9NTZ6 932 aaKnown RBP16.41■□□□□ 0.22
HDAC7-224ENST00000488927 ELOVL2Q9NXB9 296 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 DDX56Q9NY93 547 aaKnown RBP16.41■□□□□ 0.22
HDAC7-224ENST00000488927 DLGAP2Q9P1A6 1054 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 SALL4Q9UJQ4 1053 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 NEU3Q9UQ49 428 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.41■□□□□ 0.22
HDAC7-224ENST00000488927 DUSP10Q9Y6W6 482 aa16.41■□□□□ 0.22
HDAC7-224ENST00000488927 KIAA1549LQ6ZVL6 1849 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms