RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 FAM217AQ8IXS0 508 aa3.07□□□□□ -1.92
CCDC93-209ENST00000488908 SLC25A41Q8N5S1 370 aa3.07□□□□□ -1.92
CCDC93-209ENST00000488908 DBF4BQ8NFT6 615 aa3.07□□□□□ -1.92
CCDC93-209ENST00000488908 TMED6Q8WW62 240 aa3.07□□□□□ -1.92
CCDC93-209ENST00000488908 LRTOMTQ8WZ04 291 aa3.07□□□□□ -1.92
CCDC93-209ENST00000488908 FIZ1Q96SL8 496 aa3.07□□□□□ -1.92
CCDC93-209ENST00000488908 EPYCQ99645 322 aa3.07□□□□□ -1.92
CCDC93-209ENST00000488908 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.07□□□□□ -1.92
CCDC93-209ENST00000488908 DONSONQ9NYP3 566 aa3.07□□□□□ -1.92
CCDC93-209ENST00000488908 TNFSF13BQ9Y275 285 aa3.07□□□□□ -1.92
CCDC93-209ENST00000488908 WDR81Q562E7 1941 aa3.07□□□□□ -1.92
CCDC93-209ENST00000488908 CXorf65A6NEN9 183 aa3.06□□□□□ -1.92
CCDC93-209ENST00000488908 MSI1O43347 362 aaKnown RBP3.06□□□□□ -1.92
CCDC93-209ENST00000488908 ANXA2P07355 339 aaKnown RBP3.06□□□□□ -1.92
CCDC93-209ENST00000488908 DAOP14920 347 aa3.06□□□□□ -1.92
CCDC93-209ENST00000488908 TUBA1BP68363 451 aa3.06□□□□□ -1.92
CCDC93-209ENST00000488908 DUSP6Q16828 381 aa3.06□□□□□ -1.92
CCDC93-209ENST00000488908 P3H1Q32P28 736 aa3.06□□□□□ -1.92
CCDC93-209ENST00000488908 C10orf76Q5T2E6 689 aa3.06□□□□□ -1.92
CCDC93-209ENST00000488908 Q6ZSV7 163 aa3.06□□□□□ -1.92
CCDC93-209ENST00000488908 ZNF367Q7RTV3 350 aa3.06□□□□□ -1.92
CCDC93-209ENST00000488908 TCP11L2Q8N4U5 519 aa3.06□□□□□ -1.92
CCDC93-209ENST00000488908 ADPRHL1Q8NDY3 354 aa3.06□□□□□ -1.92
CCDC93-209ENST00000488908 RUNDC1Q96C34 613 aa3.06□□□□□ -1.92
CCDC93-209ENST00000488908 PKP4Q99569 1192 aa3.06□□□□□ -1.92
CCDC93-209ENST00000488908 POLDIP3Q9BY77 421 aaKnown RBP3.06□□□□□ -1.92
CCDC93-209ENST00000488908 FAM204AQ9H8W3 233 aa3.06□□□□□ -1.92
CCDC93-209ENST00000488908 IL21RQ9HBE5 538 aa3.06□□□□□ -1.92
CCDC93-209ENST00000488908 AS3MTQ9HBK9 375 aa3.06□□□□□ -1.92
CCDC93-209ENST00000488908 TYW1Q9NV66 732 aaKnown RBP3.06□□□□□ -1.92
CCDC93-209ENST00000488908 PCDHB7Q9Y5E2 793 aa3.06□□□□□ -1.92
CCDC93-209ENST00000488908 SAC3D1A6NKF1 404 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 ASAP2O43150 1006 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 MGEA5O60502 916 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 KCNJ13O60928 360 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 ALDH1L1O75891 902 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 LDLRP01130 860 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 ITGB8P26012 769 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 SLC5A2P31639 672 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 SLC16A2P36021 539 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 GLIPR1P48060 266 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 PMS2P54278 862 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 RNF220Q5VTB9 566 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 MRNIPQ6NTE8 343 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 PIK3AP1Q6ZUJ8 805 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 KRT27Q7Z3Y8 459 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 DCUN1D3Q8IWE4 304 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 FAM185AQ8N0U4 392 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 LMNTD1Q8N9Z9 388 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 KDM1BQ8NB78 822 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 ZCRB1Q8TBF4 217 aaKnown RBP3.05□□□□□ -1.92
CCDC93-209ENST00000488908 BICD2Q8TD16 824 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 STRBPQ96SI9 672 aaKnown RBP3.05□□□□□ -1.92
CCDC93-209ENST00000488908 C1QTNF5Q9BXJ0 243 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 RTFDC1Q9BY42 306 aaPredicted RBP3.05□□□□□ -1.92
CCDC93-209ENST00000488908 SLC4A4Q9Y6R1 1079 aa3.05□□□□□ -1.92
CCDC93-209ENST00000488908 THAP12O43422 761 aa3.04□□□□□ -1.92
CCDC93-209ENST00000488908 RFPL1O75677 317 aa3.04□□□□□ -1.92
CCDC93-209ENST00000488908 PAK4O96013 591 aaPredicted RBP3.04□□□□□ -1.92
CCDC93-209ENST00000488908 MST1P26927 711 aa3.04□□□□□ -1.92
CCDC93-209ENST00000488908 MCL1Q07820 350 aa3.04□□□□□ -1.92
CCDC93-209ENST00000488908 CRTC1Q6UUV9 634 aa3.04□□□□□ -1.92
CCDC93-209ENST00000488908 C16orf89Q6UX73 402 aa3.04□□□□□ -1.92
CCDC93-209ENST00000488908 CTCFLQ8NI51 663 aaPredicted RBP3.04□□□□□ -1.92
CCDC93-209ENST00000488908 APOLD1Q96LR9 279 aa3.04□□□□□ -1.92
CCDC93-209ENST00000488908 B3GNT4Q9C0J1 378 aa3.04□□□□□ -1.92
CCDC93-209ENST00000488908 SFXN1Q9H9B4 322 aa3.04□□□□□ -1.92
CCDC93-209ENST00000488908 C1orf112Q9NSG2 853 aa3.04□□□□□ -1.92
CCDC93-209ENST00000488908 FBXO28Q9NVF7 368 aa3.04□□□□□ -1.92
CCDC93-209ENST00000488908 OCIAD1Q9NX40 245 aa3.04□□□□□ -1.92
CCDC93-209ENST00000488908 UBE2J1Q9Y385 318 aaPredicted RBP3.04□□□□□ -1.92
CCDC93-209ENST00000488908 LMTK3Q96Q04 1460 aa3.03□□□□□ -1.92
CCDC93-209ENST00000488908 A0A087WZ62 844 aa3.03□□□□□ -1.92
CCDC93-209ENST00000488908 M0QZQ0 153 aa3.03□□□□□ -1.92
CCDC93-209ENST00000488908 KIF3BO15066 747 aa3.03□□□□□ -1.92
CCDC93-209ENST00000488908 LMX1BO60663 402 aa3.03□□□□□ -1.92
CCDC93-209ENST00000488908 U2AF1L5P0DN76 240 aaPredicted RBP3.03□□□□□ -1.92
CCDC93-209ENST00000488908 CHRNA5P30532 468 aa3.03□□□□□ -1.92
CCDC93-209ENST00000488908 AMTP48728 403 aa3.03□□□□□ -1.92
CCDC93-209ENST00000488908 CRIP2P52943 208 aaPredicted RBP3.03□□□□□ -1.92
CCDC93-209ENST00000488908 NUDT6P53370 316 aa3.03□□□□□ -1.92
CCDC93-209ENST00000488908 U2AF1Q01081 240 aaKnown RBP eCLIP3.03□□□□□ -1.92
CCDC93-209ENST00000488908 NSUN2Q08J23 767 aaKnown RBP eCLIP3.03□□□□□ -1.92
CCDC93-209ENST00000488908 GRSF1Q12849 480 aaKnown RBP eCLIP3.03□□□□□ -1.92
CCDC93-209ENST00000488908 ILF3Q12906 894 aaKnown RBP eCLIP3.03□□□□□ -1.92
CCDC93-209ENST00000488908 TRAF3Q13114 568 aa3.03□□□□□ -1.92
CCDC93-209ENST00000488908 HNF4GQ14541 408 aa3.03□□□□□ -1.92
CCDC93-209ENST00000488908 TTF1Q15361 905 aaPredicted RBP3.03□□□□□ -1.92
CCDC93-209ENST00000488908 RRAGBQ5VZM2 374 aa3.03□□□□□ -1.92
CCDC93-209ENST00000488908 WDR93Q6P2C0 686 aa3.03□□□□□ -1.92
CCDC93-209ENST00000488908 IGFN1Q86VF2 1251 aa3.03□□□□□ -1.92
CCDC93-209ENST00000488908 EXOC3L1Q86VI1 746 aa3.03□□□□□ -1.92
CCDC93-209ENST00000488908 ADGRF3Q8IZF5 1079 aa3.03□□□□□ -1.92
CCDC93-209ENST00000488908 GRAMD1AQ96CP6 724 aa3.03□□□□□ -1.92
CCDC93-209ENST00000488908 IQCDQ96DY2 449 aa3.03□□□□□ -1.92
CCDC93-209ENST00000488908 NUDT22Q9BRQ3 303 aa3.03□□□□□ -1.92
CCDC93-209ENST00000488908 IL25Q9H293 177 aa3.03□□□□□ -1.92
CCDC93-209ENST00000488908 ABHD16BQ9H3Z7 469 aa3.03□□□□□ -1.92
CCDC93-209ENST00000488908 TXNRD2Q9NNW7 524 aa3.03□□□□□ -1.92
CCDC93-209ENST00000488908 IL36RNQ9UBH0 155 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms