RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 H0Y8X5 98 aa19.06■□□□□ 0.64
HDAC6-231ENST00000488905 CAPN9O14815 690 aa19.06■□□□□ 0.64
HDAC6-231ENST00000488905 PCDHGA12O60330 932 aa19.06■□□□□ 0.64
HDAC6-231ENST00000488905 MOCS3O95396 460 aa19.06■□□□□ 0.64
HDAC6-231ENST00000488905 GNA14O95837 355 aa19.06■□□□□ 0.64
HDAC6-231ENST00000488905 AFPP02771 609 aaKnown RBP19.06■□□□□ 0.64
HDAC6-231ENST00000488905 SRPRAP08240 638 aaKnown RBP19.06■□□□□ 0.64
HDAC6-231ENST00000488905 CTSOP43234 321 aaPredicted RBP19.06■□□□□ 0.64
HDAC6-231ENST00000488905 MARSP56192 900 aaKnown RBP19.06■□□□□ 0.64
HDAC6-231ENST00000488905 RACK1P63244 317 aaKnown RBP19.06■□□□□ 0.64
HDAC6-231ENST00000488905 NUCB2P80303 420 aa19.06■□□□□ 0.64
HDAC6-231ENST00000488905 SFSWAPQ12872 951 aaKnown RBP19.06■□□□□ 0.64
HDAC6-231ENST00000488905 KCNT1Q5JUK3 1230 aa19.06■□□□□ 0.64
HDAC6-231ENST00000488905 C9orf64Q5T6V5 341 aa19.06■□□□□ 0.64
HDAC6-231ENST00000488905 SYPL2Q5VXT5 272 aa19.06■□□□□ 0.64
HDAC6-231ENST00000488905 TMPRSS7Q7RTY8 843 aa19.06■□□□□ 0.64
HDAC6-231ENST00000488905 CHSY1Q86X52 802 aa19.06■□□□□ 0.64
HDAC6-231ENST00000488905 TJP2Q9UDY2 1190 aa19.06■□□□□ 0.64
HDAC6-231ENST00000488905 ERVW-1Q9UQF0 538 aa19.06■□□□□ 0.64
HDAC6-231ENST00000488905 CEP83Q9Y592 693 aa19.06■□□□□ 0.64
HDAC6-231ENST00000488905 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.06■□□□□ 0.64
HDAC6-231ENST00000488905 FASNP49327 2511 aaKnown RBP19.06■□□□□ 0.64
HDAC6-231ENST00000488905 EDDM13A0A1B0GTR0 161 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 A0A1W2PPC4 97 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 GOLGA8CPA6NN73 597 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 TTC34A8MYJ7 566 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 E5RJQ4 531 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 KCNK3O14649 394 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 PAPSS1O43252 624 aaPredicted RBP19.05■□□□□ 0.64
HDAC6-231ENST00000488905 RNASEH2AO75792 299 aaKnown RBP19.05■□□□□ 0.64
HDAC6-231ENST00000488905 IGLV3-25P01717 112 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 HOXB3P14651 431 aaPredicted RBP19.05■□□□□ 0.64
HDAC6-231ENST00000488905 GALCP54803 685 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 PAK1Q13153 545 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 MORC3Q14149 939 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 RAP1GAP2Q684P5 730 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 NCEH1Q6PIU2 408 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 LRSAM1Q6UWE0 723 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 MMAAQ8IVH4 418 aaKnown RBP19.05■□□□□ 0.64
HDAC6-231ENST00000488905 LGI2Q8N0V4 545 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 STK32AQ8WU08 396 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 BTN2A3PQ96KV6 586 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 SLC6A18Q96N87 628 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 SLC4A5Q9BY07 1137 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 ACE2Q9BYF1 805 aaPredicted RBP19.05■□□□□ 0.64
HDAC6-231ENST00000488905 POPDC2Q9HBU9 364 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 ADAMTS1Q9UHI8 967 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 CYTH4Q9UIA0 394 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 FZD4Q9ULV1 537 aa19.05■□□□□ 0.64
HDAC6-231ENST00000488905 TARSL2A2RTX5 802 aaKnown RBP19.04■□□□□ 0.64
HDAC6-231ENST00000488905 LRRC72A6NJI9 287 aa19.04■□□□□ 0.64
HDAC6-231ENST00000488905 BIN1O00499 593 aa19.04■□□□□ 0.64
HDAC6-231ENST00000488905 VILLO15195 856 aa19.04■□□□□ 0.64
HDAC6-231ENST00000488905 MED7O43513 233 aa19.04■□□□□ 0.64
HDAC6-231ENST00000488905 TNFSF14O43557 240 aa19.04■□□□□ 0.64
HDAC6-231ENST00000488905 LETM1O95202 739 aaPredicted RBP19.04■□□□□ 0.64
HDAC6-231ENST00000488905 TACR2P21452 398 aa19.04■□□□□ 0.64
HDAC6-231ENST00000488905 GNA15P30679 374 aa19.04■□□□□ 0.64
HDAC6-231ENST00000488905 PSMD8P48556 350 aa19.04■□□□□ 0.64
HDAC6-231ENST00000488905 STX17P56962 302 aa19.04■□□□□ 0.64
HDAC6-231ENST00000488905 C21orf59P57076 290 aa19.04■□□□□ 0.64
HDAC6-231ENST00000488905 ECT2LQ008S8 904 aa19.04■□□□□ 0.64
HDAC6-231ENST00000488905 IL9RQ01113 521 aa19.04■□□□□ 0.64
HDAC6-231ENST00000488905 INAVAQ3KP66 663 aa19.04■□□□□ 0.64
HDAC6-231ENST00000488905 ZC3H12AQ5D1E8 599 aaKnown RBP19.04■□□□□ 0.64
HDAC6-231ENST00000488905 RNF219Q5W0B1 726 aaPredicted RBP19.04■□□□□ 0.64
HDAC6-231ENST00000488905 IGSF10Q6WRI0 2623 aa19.04■□□□□ 0.64
HDAC6-231ENST00000488905 MDM1Q8TC05 714 aa19.04■□□□□ 0.64
HDAC6-231ENST00000488905 OMDQ99983 421 aa19.04■□□□□ 0.64
HDAC6-231ENST00000488905 NEUROG2Q9H2A3 272 aa19.04■□□□□ 0.64
HDAC6-231ENST00000488905 GPSM3Q9Y4H4 160 aa19.04■□□□□ 0.64
HDAC6-231ENST00000488905 URB1O60287 2271 aaKnown RBP19.03■□□□□ 0.64
HDAC6-231ENST00000488905 ARID1BQ8NFD5 2236 aaPredicted RBP19.03■□□□□ 0.64
HDAC6-231ENST00000488905 F5H5T6 163 aa19.03■□□□□ 0.64
HDAC6-231ENST00000488905 THAP12O43422 761 aa19.03■□□□□ 0.64
HDAC6-231ENST00000488905 DFNA5O60443 496 aa19.03■□□□□ 0.64
HDAC6-231ENST00000488905 TRUB2O95900 331 aaKnown RBP19.03■□□□□ 0.64
HDAC6-231ENST00000488905 PDCLQ13371 301 aa19.03■□□□□ 0.64
HDAC6-231ENST00000488905 BECN1Q14457 450 aa19.03■□□□□ 0.64
HDAC6-231ENST00000488905 TMEM110Q86TL2 294 aa19.03■□□□□ 0.64
HDAC6-231ENST00000488905 APCDD1Q8J025 514 aa19.03■□□□□ 0.64
HDAC6-231ENST00000488905 GALNT15Q8N3T1 639 aa19.03■□□□□ 0.64
HDAC6-231ENST00000488905 OR2T34Q8NGX1 318 aa19.03■□□□□ 0.64
HDAC6-231ENST00000488905 RPL10LQ96L21 214 aaKnown RBP19.03■□□□□ 0.64
HDAC6-231ENST00000488905 MED15Q96RN5 788 aa19.03■□□□□ 0.64
HDAC6-231ENST00000488905 EBF2Q9HAK2 575 aa19.03■□□□□ 0.64
HDAC6-231ENST00000488905 UBE2TQ9NPD8 197 aaPredicted RBP19.03■□□□□ 0.64
HDAC6-231ENST00000488905 SLCO3A1Q9UIG8 710 aa19.03■□□□□ 0.64
HDAC6-231ENST00000488905 A0A1B0GTQ1 180 aa19.02■□□□□ 0.64
HDAC6-231ENST00000488905 C10orf142B7Z368 130 aa19.02■□□□□ 0.64
HDAC6-231ENST00000488905 ADH1BP00325 375 aa19.02■□□□□ 0.64
HDAC6-231ENST00000488905 SLC8A1P32418 973 aa19.02■□□□□ 0.64
HDAC6-231ENST00000488905 STK19P49842 368 aaPredicted RBP19.02■□□□□ 0.64
HDAC6-231ENST00000488905 ADPRHP54922 357 aa19.02■□□□□ 0.64
HDAC6-231ENST00000488905 YWHAZP63104 245 aaKnown RBP19.02■□□□□ 0.64
HDAC6-231ENST00000488905 PITX1P78337 314 aaPredicted RBP19.02■□□□□ 0.64
HDAC6-231ENST00000488905 KCNJ12Q14500 433 aa19.02■□□□□ 0.64
HDAC6-231ENST00000488905 ENOSF1Q7L5Y1 443 aa19.02■□□□□ 0.64
HDAC6-231ENST00000488905 CIR1Q86X95 450 aaPredicted RBP19.02■□□□□ 0.64
HDAC6-231ENST00000488905 STK40Q8N2I9 435 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms