RNA–Protein interactions for RNA: ENST00000488857.5

VAMP2-204, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene VAMP2, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-204ENST00000488857 EMC1Q8N766 993 aa23.09■■□□□ 1.29
VAMP2-204ENST00000488857 SLC6A17Q9H1V8 727 aa23.09■■□□□ 1.29
VAMP2-204ENST00000488857 FBRSQ9HAH7 460 aa23.09■■□□□ 1.29
VAMP2-204ENST00000488857 USP36Q9P275 1121 aaKnown RBP23.09■■□□□ 1.29
VAMP2-204ENST00000488857 CEP192Q8TEP8 1941 aa23.09■■□□□ 1.29
VAMP2-204ENST00000488857 TCRBV5S1A1TA0A578 114 aa23.08■■□□□ 1.29
VAMP2-204ENST00000488857 GOLGA6L19H0YKK7 550 aa23.08■■□□□ 1.29
VAMP2-204ENST00000488857 MAP3K13O43283 966 aa23.08■■□□□ 1.29
VAMP2-204ENST00000488857 CLDN11O75508 207 aa23.08■■□□□ 1.29
VAMP2-204ENST00000488857 HLA-EP13747 358 aa23.08■■□□□ 1.29
VAMP2-204ENST00000488857 PDGFRAP16234 1089 aa23.08■■□□□ 1.29
VAMP2-204ENST00000488857 PRKCIP41743 596 aa23.08■■□□□ 1.29
VAMP2-204ENST00000488857 ATXN1P54253 815 aaKnown RBP23.08■■□□□ 1.29
VAMP2-204ENST00000488857 CCDC14Q49A88 953 aa23.08■■□□□ 1.29
VAMP2-204ENST00000488857 C14orf80Q86SX3 495 aa23.08■■□□□ 1.29
VAMP2-204ENST00000488857 CIR1Q86X95 450 aaPredicted RBP23.08■■□□□ 1.29
VAMP2-204ENST00000488857 TMPRSS6Q8IU80 811 aa23.08■■□□□ 1.29
VAMP2-204ENST00000488857 OR2T3Q8NH03 318 aa23.08■■□□□ 1.29
VAMP2-204ENST00000488857 RXFP2Q8WXD0 754 aa23.08■■□□□ 1.29
VAMP2-204ENST00000488857 CENPIQ92674 756 aaPredicted RBP23.08■■□□□ 1.29
VAMP2-204ENST00000488857 ERLEC1Q96DZ1 483 aa23.08■■□□□ 1.29
VAMP2-204ENST00000488857 MRGPRX3Q96LB0 322 aa23.08■■□□□ 1.29
VAMP2-204ENST00000488857 HAPLN3Q96S86 360 aa23.08■■□□□ 1.29
VAMP2-204ENST00000488857 SIK2Q9H0K1 926 aa23.08■■□□□ 1.29
VAMP2-204ENST00000488857 VPS45Q9NRW7 570 aa23.08■■□□□ 1.29
VAMP2-204ENST00000488857 SEPT11Q9NVA2 429 aaKnown RBP23.08■■□□□ 1.29
VAMP2-204ENST00000488857 DOCK4Q8N1I0 1966 aa23.08■■□□□ 1.29
VAMP2-204ENST00000488857 CACNA1AO00555 2505 aa23.08■■□□□ 1.28
VAMP2-204ENST00000488857 IGLV3-10A0A075B6K4 115 aa23.07■■□□□ 1.28
VAMP2-204ENST00000488857 IGLV3-19P01714 112 aa23.07■■□□□ 1.28
VAMP2-204ENST00000488857 SRPRAP08240 638 aaKnown RBP23.07■■□□□ 1.28
VAMP2-204ENST00000488857 KRT3P12035 628 aa23.07■■□□□ 1.28
VAMP2-204ENST00000488857 SDC4P31431 198 aa23.07■■□□□ 1.28
VAMP2-204ENST00000488857 IRAK1P51617 712 aa23.07■■□□□ 1.28
VAMP2-204ENST00000488857 UBASH3AP57075 661 aa23.07■■□□□ 1.28
VAMP2-204ENST00000488857 ASIC2Q16515 512 aa23.07■■□□□ 1.28
VAMP2-204ENST00000488857 SFMBT2Q5VUG0 894 aa23.07■■□□□ 1.28
VAMP2-204ENST00000488857 ACAD10Q6JQN1 1059 aa23.07■■□□□ 1.28
VAMP2-204ENST00000488857 KIAA1324Q6UXG2 1013 aaKnown RBP23.07■■□□□ 1.28
VAMP2-204ENST00000488857 STRADAQ7RTN6 431 aa23.07■■□□□ 1.28
VAMP2-204ENST00000488857 JOSD2Q8TAC2 188 aa23.07■■□□□ 1.28
VAMP2-204ENST00000488857 NUP58Q9BVL2 599 aa23.07■■□□□ 1.28
VAMP2-204ENST00000488857 ITM2CQ9NQX7 267 aa23.07■■□□□ 1.28
VAMP2-204ENST00000488857 SUN2Q9UH99 717 aa23.07■■□□□ 1.28
VAMP2-204ENST00000488857 TBC1D30Q9Y2I9 924 aa23.07■■□□□ 1.28
VAMP2-204ENST00000488857 GON4LQ3T8J9 2241 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 A0A1W2PQJ5 194 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 SIGLEC16A6NMB1 481 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 DRGXA6NNA5 263 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 AP5Z1O43299 807 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 GGCXP38435 758 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 CDH4P55283 916 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 ST8SIA6P61647 398 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 ATP11AP98196 1134 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 ECT2LQ008S8 904 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 CREB5Q02930 508 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 SULT2A1Q06520 285 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 ARTNQ5T4W7 220 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 E4F1Q66K89 784 aaPredicted RBP23.06■■□□□ 1.28
VAMP2-204ENST00000488857 PHLDB2Q86SQ0 1253 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 FAM131BQ86XD5 332 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 APCDD1Q8J025 514 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 PRCCQ92733 491 aaPredicted RBP23.06■■□□□ 1.28
VAMP2-204ENST00000488857 ALG14Q96F25 216 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 SIPA1Q96FS4 1042 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 VCPIP1Q96JH7 1222 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 PPP1R9BQ96SB3 815 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 PRSS16Q9NQE7 514 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 DLL3Q9NYJ7 618 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 CYP8B1Q9UNU6 501 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 ERVW-1Q9UQF0 538 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.06■■□□□ 1.28
VAMP2-204ENST00000488857 ITIH6Q6UXX5 1313 aa23.06■■□□□ 1.28
VAMP2-204ENST00000488857 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.05■■□□□ 1.28
VAMP2-204ENST00000488857 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.05■■□□□ 1.28
VAMP2-204ENST00000488857 TNFAIP3P21580 790 aa23.05■■□□□ 1.28
VAMP2-204ENST00000488857 SDHBP21912 280 aa23.05■■□□□ 1.28
VAMP2-204ENST00000488857 RFC1P35251 1148 aaPredicted RBP23.05■■□□□ 1.28
VAMP2-204ENST00000488857 ID4P47928 161 aa23.05■■□□□ 1.28
VAMP2-204ENST00000488857 DHPSP49366 369 aaPredicted RBP23.05■■□□□ 1.28
VAMP2-204ENST00000488857 VASPP50552 380 aaPredicted RBP23.05■■□□□ 1.28
VAMP2-204ENST00000488857 RPL6Q02878 288 aaKnown RBP23.05■■□□□ 1.28
VAMP2-204ENST00000488857 ZNF177Q13360 481 aaPredicted RBP23.05■■□□□ 1.28
VAMP2-204ENST00000488857 C15orf59Q2T9L4 293 aaPredicted RBP23.05■■□□□ 1.28
VAMP2-204ENST00000488857 HNRNPA1L2Q32P51 320 aaKnown RBP23.05■■□□□ 1.28
VAMP2-204ENST00000488857 PPP1R15BQ5SWA1 713 aa23.05■■□□□ 1.28
VAMP2-204ENST00000488857 CYP2U1Q7Z449 544 aa23.05■■□□□ 1.28
VAMP2-204ENST00000488857 TMEFF1Q8IYR6 380 aa23.05■■□□□ 1.28
VAMP2-204ENST00000488857 MCOLN2Q8IZK6 566 aa23.05■■□□□ 1.28
VAMP2-204ENST00000488857 RMDN1Q96DB5 314 aa23.05■■□□□ 1.28
VAMP2-204ENST00000488857 IQCDQ96DY2 449 aa23.05■■□□□ 1.28
VAMP2-204ENST00000488857 SELENOOQ9BVL4 669 aa23.05■■□□□ 1.28
VAMP2-204ENST00000488857 HAUS4Q9H6D7 363 aa23.05■■□□□ 1.28
VAMP2-204ENST00000488857 CD93Q9NPY3 652 aa23.05■■□□□ 1.28
VAMP2-204ENST00000488857 TMPRSS4Q9NRS4 437 aa23.05■■□□□ 1.28
VAMP2-204ENST00000488857 GJB6O95452 261 aa23.04■■□□□ 1.28
VAMP2-204ENST00000488857 MZF1P28698 734 aaPredicted RBP23.04■■□□□ 1.28
VAMP2-204ENST00000488857 DPP6P42658 865 aa23.04■■□□□ 1.28
VAMP2-204ENST00000488857 PTGER3P43115 390 aa23.04■■□□□ 1.28
VAMP2-204ENST00000488857 CTSOP43234 321 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms