RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, human

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG9A-222	ENST00000488833	PON1	P27169	355 aa		18.91	■□□□□ 0.62
ATG9A-222	ENST00000488833	ECT2L	Q008S8	904 aa		18.91	■□□□□ 0.62
ATG9A-222	ENST00000488833	CST6	Q15828	149 aa		18.91	■□□□□ 0.62
ATG9A-222	ENST00000488833	USP30	Q70CQ3	517 aa		18.91	■□□□□ 0.62
ATG9A-222	ENST00000488833	CIR1	Q86X95	450 aa	Predicted RBP	18.91	■□□□□ 0.62
ATG9A-222	ENST00000488833	APCDD1	Q8J025	514 aa		18.91	■□□□□ 0.62
ATG9A-222	ENST00000488833	DEFB106A	Q8N104	65 aa		18.91	■□□□□ 0.62
ATG9A-222	ENST00000488833	KDF1	Q8NAX2	398 aa	Predicted RBP	18.91	■□□□□ 0.62
ATG9A-222	ENST00000488833	C1orf131	Q8NDD1	294 aa	Known RBP	18.91	■□□□□ 0.62
ATG9A-222	ENST00000488833	RNF34	Q969K3	372 aa		18.91	■□□□□ 0.62
ATG9A-222	ENST00000488833	PPP1R13B	Q96KQ4	1090 aa		18.91	■□□□□ 0.62
ATG9A-222	ENST00000488833	SLC2A13	Q96QE2	648 aa		18.91	■□□□□ 0.62
ATG9A-222	ENST00000488833	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	18.91	■□□□□ 0.62
ATG9A-222	ENST00000488833	ASNSD1	Q9NWL6	643 aa		18.91	■□□□□ 0.62
ATG9A-222	ENST00000488833	DDIT4	Q9NX09	232 aa		18.91	■□□□□ 0.62
ATG9A-222	ENST00000488833	FBXL12	Q9NXK8	326 aa		18.91	■□□□□ 0.62
ATG9A-222	ENST00000488833	AJAP1	Q9UKB5	411 aa	Predicted RBP	18.91	■□□□□ 0.62
ATG9A-222	ENST00000488833	PCOLCE2	Q9UKZ9	415 aa		18.91	■□□□□ 0.62
ATG9A-222	ENST00000488833	SCML1	Q9UN30	329 aa		18.91	■□□□□ 0.62
ATG9A-222	ENST00000488833	TMEM131	Q92545	1883 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	FAM47DP	A6NHR8	397 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	MID1	O15344	667 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	HSF2BP	O75031	334 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	GRAP2	O75791	330 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	GLI1	P08151	1106 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	SLC2A3	P11169	496 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	PDGFRA	P16234	1089 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	ABCB4	P21439	1286 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	CD27	P26842	260 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	GRIA4	P48058	902 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	NUMB	P49757	651 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	SFSWAP	Q12872	951 aa	Known RBP	18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	ARID5B	Q14865	1188 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	KIF19	Q2TAC6	998 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	EFHC1	Q5JVL4	640 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	RABGAP1L	Q5R372	815 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	C9orf64	Q5T6V5	341 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	OR6B2	Q6IFH4	312 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	LAYN	Q6UX15	382 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	FAM183BP	Q6ZVS7	135 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	RAB44	Q7Z6P3	723 aa	Predicted RBP	18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	MMAA	Q8IVH4	418 aa	Known RBP	18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	WDTC1	Q8N5D0	677 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	MLKL	Q8NB16	471 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	ZCCHC14	Q8WYQ9	949 aa	Known RBP	18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	NOX5	Q96PH1	765 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	OSGEP	Q9NPF4	335 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	SERGEF	Q9UGK8	458 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	PCDHGC3	Q9UN70	934 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	ITIH6	Q6UXX5	1313 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	CFAP47	Q6ZTR5	3102 aa		18.9	■□□□□ 0.62
ATG9A-222	ENST00000488833	ZFYVE26	Q68DK2	2539 aa		18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833		A0A1W2PP55	124 aa		18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	TARSL2	A2RTX5	802 aa	Known RBP	18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	CBFA2T3	O75081	653 aa		18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	RNASEH2A	O75792	299 aa	Known RBP	18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	CCR1	P32246	355 aa		18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	PSMD8	P48556	350 aa		18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	STK19	P49842	368 aa	Predicted RBP	18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	PTK2	Q05397	1052 aa		18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	EIF4EBP2	Q13542	120 aa	Predicted RBP	18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	MAN2A1	Q16706	1144 aa		18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	TTC39B	Q5VTQ0	682 aa	Predicted RBP	18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	KIAA0895L	Q68EN5	471 aa		18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	ADAT2	Q7Z6V5	191 aa	Known RBP	18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	CCAR2	Q8N163	923 aa	Known RBP	18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	RPL10L	Q96L21	214 aa	Known RBP	18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	PRMT1	Q99873	361 aa	Known RBP	18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	OMD	Q99983	421 aa		18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	SYNC	Q9H7C4	482 aa		18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	SIX2	Q9NPC8	291 aa		18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	SLCO3A1	Q9UIG8	710 aa		18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	DNAJC12	Q9UKB3	198 aa		18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	ANKRD6	Q9Y2G4	727 aa		18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	SNX11	Q9Y5W9	270 aa		18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	TP53BP1	Q12888	1972 aa	Predicted RBP	18.89	■□□□□ 0.61
ATG9A-222	ENST00000488833	PLXNA2	O75051	1894 aa		18.88	■□□□□ 0.61
ATG9A-222	ENST00000488833		A0A1B0GVM2	712 aa		18.88	■□□□□ 0.61
ATG9A-222	ENST00000488833	TCAF2	A6NFQ2	919 aa		18.88	■□□□□ 0.61
ATG9A-222	ENST00000488833	FLRT2	O43155	660 aa		18.88	■□□□□ 0.61
ATG9A-222	ENST00000488833	ERBB2	P04626	1255 aa		18.88	■□□□□ 0.61
ATG9A-222	ENST00000488833	IGHV4-34	P06331	123 aa		18.88	■□□□□ 0.61
ATG9A-222	ENST00000488833	PNMA6A	P0CW24	399 aa	Predicted RBP	18.88	■□□□□ 0.61
ATG9A-222	ENST00000488833	KRT9	P35527	623 aa		18.88	■□□□□ 0.61
ATG9A-222	ENST00000488833	CENPC	Q03188	943 aa		18.88	■□□□□ 0.61
ATG9A-222	ENST00000488833	SLC12A1	Q13621	1099 aa		18.88	■□□□□ 0.61
ATG9A-222	ENST00000488833	PTPN20	Q4JDL3	420 aa		18.88	■□□□□ 0.61
ATG9A-222	ENST00000488833	NCEH1	Q6PIU2	408 aa		18.88	■□□□□ 0.61
ATG9A-222	ENST00000488833	OLFML1	Q6UWY5	402 aa		18.88	■□□□□ 0.61
ATG9A-222	ENST00000488833	C11orf57	Q6ZUT1	292 aa	Predicted RBP	18.88	■□□□□ 0.61
ATG9A-222	ENST00000488833	FAM114A1	Q8IWE2	563 aa		18.88	■□□□□ 0.61
ATG9A-222	ENST00000488833	PNPLA1	Q8N8W4	532 aa		18.88	■□□□□ 0.61
ATG9A-222	ENST00000488833	CLSTN2	Q9H4D0	955 aa		18.88	■□□□□ 0.61
ATG9A-222	ENST00000488833	APOBEC2	Q9Y235	224 aa	Known RBP	18.88	■□□□□ 0.61
ATG9A-222	ENST00000488833	PCDHGB2	Q9Y5G2	931 aa		18.88	■□□□□ 0.61
ATG9A-222	ENST00000488833	ANKRD11	Q6UB99	2663 aa	Predicted RBP	18.87	■□□□□ 0.61
ATG9A-222	ENST00000488833	LRRC72	A6NJI9	287 aa		18.87	■□□□□ 0.61
ATG9A-222	ENST00000488833	DAB1	O75553	588 aa		18.87	■□□□□ 0.61
ATG9A-222	ENST00000488833	MZF1	P28698	734 aa	Predicted RBP	18.87	■□□□□ 0.61
ATG9A-222	ENST00000488833	SLC8A1	P32418	973 aa		18.87	■□□□□ 0.61

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