RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 MS4A13Q5J8X5 152 aa19.73■□□□□ 0.75
GGPS1-206ENST00000488594 PITRM1Q5JRX3 1037 aa19.73■□□□□ 0.75
GGPS1-206ENST00000488594 OXR1Q8N573 874 aa19.73■□□□□ 0.75
GGPS1-206ENST00000488594 SLC35C1Q96A29 364 aa19.73■□□□□ 0.75
GGPS1-206ENST00000488594 FCRL2Q96LA5 508 aaPredicted RBP19.73■□□□□ 0.75
GGPS1-206ENST00000488594 DCBLD2Q96PD2 775 aa19.73■□□□□ 0.75
GGPS1-206ENST00000488594 EBF2Q9HAK2 575 aa19.73■□□□□ 0.75
GGPS1-206ENST00000488594 A0A1W2PR77 199 aa19.72■□□□□ 0.75
GGPS1-206ENST00000488594 SART1O43290 800 aaKnown RBP19.72■□□□□ 0.75
GGPS1-206ENST00000488594 LUC7L3O95232 432 aaKnown RBP19.72■□□□□ 0.75
GGPS1-206ENST00000488594 ADH1BP00325 375 aa19.72■□□□□ 0.75
GGPS1-206ENST00000488594 PRCPP42785 496 aa19.72■□□□□ 0.75
GGPS1-206ENST00000488594 ECT2LQ008S8 904 aa19.72■□□□□ 0.75
GGPS1-206ENST00000488594 KCNJ12Q14500 433 aa19.72■□□□□ 0.75
GGPS1-206ENST00000488594 SHBQ15464 509 aa19.72■□□□□ 0.75
GGPS1-206ENST00000488594 PRAMEF14Q5SWL7 426 aa19.72■□□□□ 0.75
GGPS1-206ENST00000488594 RNF219Q5W0B1 726 aaPredicted RBP19.72■□□□□ 0.75
GGPS1-206ENST00000488594 SND1Q7KZF4 910 aaKnown RBP eCLIP19.72■□□□□ 0.75
GGPS1-206ENST00000488594 SERAC1Q96JX3 654 aa19.72■□□□□ 0.75
GGPS1-206ENST00000488594 TRIM62Q9BVG3 475 aa19.72■□□□□ 0.75
GGPS1-206ENST00000488594 NUCKS1Q9H1E3 243 aaKnown RBP19.72■□□□□ 0.75
GGPS1-206ENST00000488594 GOLPH3LQ9H4A5 285 aa19.72■□□□□ 0.75
GGPS1-206ENST00000488594 ERVMER34-1Q9H9K5 563 aa19.72■□□□□ 0.75
GGPS1-206ENST00000488594 CEP83Q9Y592 693 aa19.72■□□□□ 0.75
GGPS1-206ENST00000488594 PCDHB4Q9Y5E5 795 aa19.72■□□□□ 0.75
GGPS1-206ENST00000488594 ATP6V1DQ9Y5K8 247 aa19.72■□□□□ 0.75
GGPS1-206ENST00000488594 TTC34A8MYJ7 566 aa19.71■□□□□ 0.75
GGPS1-206ENST00000488594 PIK3R2O00459 728 aa19.71■□□□□ 0.75
GGPS1-206ENST00000488594 EPHA8P29322 1005 aaPredicted RBP19.71■□□□□ 0.75
GGPS1-206ENST00000488594 ACADVLP49748 655 aa19.71■□□□□ 0.75
GGPS1-206ENST00000488594 ADPRHP54922 357 aa19.71■□□□□ 0.75
GGPS1-206ENST00000488594 LRRC63Q05C16 580 aa19.71■□□□□ 0.75
GGPS1-206ENST00000488594 ILKQ13418 452 aa19.71■□□□□ 0.75
GGPS1-206ENST00000488594 ELAVL3Q14576 367 aaKnown RBP19.71■□□□□ 0.75
GGPS1-206ENST00000488594 FSCBQ5H9T9 825 aa19.71■□□□□ 0.75
GGPS1-206ENST00000488594 ZNF658Q5TYW1 1059 aaPredicted RBP19.71■□□□□ 0.75
GGPS1-206ENST00000488594 OR14C36Q8NHC7 312 aa19.71■□□□□ 0.75
GGPS1-206ENST00000488594 DQX1Q8TE96 717 aaKnown RBP19.71■□□□□ 0.75
GGPS1-206ENST00000488594 SLC39A13Q96H72 371 aa19.71■□□□□ 0.75
GGPS1-206ENST00000488594 NT5C1BQ96P26 610 aa19.71■□□□□ 0.75
GGPS1-206ENST00000488594 FAM129BQ96TA1 746 aa19.71■□□□□ 0.75
GGPS1-206ENST00000488594 NRSN2Q9GZP1 204 aa19.71■□□□□ 0.75
GGPS1-206ENST00000488594 METTL14Q9HCE5 456 aaKnown RBP19.71■□□□□ 0.75
GGPS1-206ENST00000488594 KNTC1P50748 2209 aa19.71■□□□□ 0.75
GGPS1-206ENST00000488594 TLR4O00206 839 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 PMM2O15305 246 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 NNMTP40261 264 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 RXRGP48443 463 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 PSMD8P48556 350 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 NXPH1P58417 271 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 DNAJC3Q13217 504 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 DCAF6Q58WW2 860 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 ANKRD40Q6AI12 368 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 LRRC69Q6ZNQ3 347 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 BEND5Q7L4P6 421 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 CFAP52Q8N1V2 620 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 AADATQ8N5Z0 425 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 EID2Q8N6I1 236 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 PIP4K2CQ8TBX8 421 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 CLEC4CQ8WTT0 213 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 TSC1Q92574 1164 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 MYEOVQ96EZ4 313 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 SMG1Q96Q15 3661 aaKnown RBP19.7■□□□□ 0.74
GGPS1-206ENST00000488594 GSDMAQ96QA5 445 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 ZSWIM1Q9BR11 485 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 GTPBP4Q9BZE4 634 aaKnown RBP19.7■□□□□ 0.74
GGPS1-206ENST00000488594 MIS12Q9H081 205 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 TK2O00142 265 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 RRP8O43159 456 aaKnown RBP19.7■□□□□ 0.74
GGPS1-206ENST00000488594 LATO43561 262 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 APOEP02649 317 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 FYNP06241 537 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 BRD2P25440 801 aaKnown RBP19.7■□□□□ 0.74
GGPS1-206ENST00000488594 NUDT1P36639 197 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 EIF2S3P41091 472 aaKnown RBP19.7■□□□□ 0.74
GGPS1-206ENST00000488594 CTSOP43234 321 aaPredicted RBP19.7■□□□□ 0.74
GGPS1-206ENST00000488594 FMO5P49326 533 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 CETN1Q12798 172 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 TARDBPQ13148 414 aaKnown RBP eCLIP19.7■□□□□ 0.74
GGPS1-206ENST00000488594 SLC12A1Q13621 1099 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 RTP5Q14D33 572 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 NAPEPLDQ6IQ20 393 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 FBXL19Q6PCT2 694 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 MMS22LQ6ZRQ5 1243 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 PPM1KQ8N3J5 372 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 MFSD2AQ8NA29 543 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 PTPRN2Q92932 1015 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 FAM149B1Q96BN6 582 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 CRELD1Q96HD1 420 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 KDM4CQ9H3R0 1056 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 TJP2Q9UDY2 1190 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 SLCO3A1Q9UIG8 710 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 AK5Q9Y6K8 562 aa19.7■□□□□ 0.74
GGPS1-206ENST00000488594 ASXL3Q9C0F0 2248 aa19.69■□□□□ 0.74
GGPS1-206ENST00000488594 CBX4O00257 560 aa19.69■□□□□ 0.74
GGPS1-206ENST00000488594 WNT9AO14904 365 aa19.69■□□□□ 0.74
GGPS1-206ENST00000488594 SLC7A4O43246 635 aa19.69■□□□□ 0.74
GGPS1-206ENST00000488594 MAGEC1O60732 1142 aa19.69■□□□□ 0.74
GGPS1-206ENST00000488594 IL1BP01584 269 aa19.69■□□□□ 0.74
GGPS1-206ENST00000488594 MZF1P28698 734 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms