RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 LGMNQ99538 433 aa14.52□□□□□ -0.08
COL16A1-214ENST00000488128 ACO2Q99798 780 aaKnown RBP14.52□□□□□ -0.08
COL16A1-214ENST00000488128 TUT1Q9H6E5 874 aaKnown RBP14.52□□□□□ -0.08
COL16A1-214ENST00000488128 COQ10BQ9H8M1 238 aa14.52□□□□□ -0.08
COL16A1-214ENST00000488128 DNAJC28Q9NX36 388 aa14.52□□□□□ -0.08
COL16A1-214ENST00000488128 MAP3K20Q9NYL2 800 aaKnown RBP14.52□□□□□ -0.08
COL16A1-214ENST00000488128 RSL24D1Q9UHA3 163 aaKnown RBP14.52□□□□□ -0.08
COL16A1-214ENST00000488128 RAB26Q9ULW5 256 aa14.52□□□□□ -0.08
COL16A1-214ENST00000488128 PCDHGC3Q9UN70 934 aa14.52□□□□□ -0.08
COL16A1-214ENST00000488128 GMEB1Q9Y692 573 aa14.52□□□□□ -0.08
COL16A1-214ENST00000488128 STYXL1Q9Y6J8 313 aa14.52□□□□□ -0.08
COL16A1-214ENST00000488128 TRIP11Q15643 1979 aa14.52□□□□□ -0.08
COL16A1-214ENST00000488128 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.52□□□□□ -0.09
COL16A1-214ENST00000488128 NFKBIEO00221 500 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 COQ9O75208 318 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 SETSIPP0DME0 302 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 PTPRAP18433 802 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 GPD1P21695 349 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 NDST2P52849 883 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 MAPK10P53779 464 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 LSM12Q3MHD2 195 aaKnown RBP14.52□□□□□ -0.09
COL16A1-214ENST00000488128 FSCBQ5H9T9 825 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 SCUBE3Q8IX30 993 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 LRRC71Q8N4P6 559 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 ACVR1CQ8NER5 493 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 NLRP4Q96MN2 994 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 AGAP3Q96P47 875 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 PPP1R16BQ96T49 567 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 CIB1Q99828 191 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 RTKNQ9BST9 563 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 B3GNT5Q9BYG0 378 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 XYLT2Q9H1B5 865 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 RRN3Q9NYV6 651 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 EBF1Q9UH73 591 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 ZNF214Q9UL59 606 aaPredicted RBP14.52□□□□□ -0.09
COL16A1-214ENST00000488128 ADGRA2Q96PE1 1338 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 HDCP19113 662 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 CDH5P33151 784 aaPredicted RBP14.52□□□□□ -0.09
COL16A1-214ENST00000488128 SERPINB9P50453 376 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 ZNF423Q2M1K9 1284 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 DALRD3Q5D0E6 543 aaKnown RBP14.52□□□□□ -0.09
COL16A1-214ENST00000488128 POTEAQ6S8J7 498 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 EPGNQ6UW88 154 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 FAM183BPQ6ZVS7 135 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 BRSK2Q8IWQ3 736 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 RNF169Q8NCN4 708 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 LRTOMTQ8WZ04 291 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 GPRASP2Q96D09 838 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 AGAP2Q99490 1192 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 TMEM79Q9BSE2 394 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 SNRNP25Q9BV90 132 aaKnown RBP14.52□□□□□ -0.09
COL16A1-214ENST00000488128 ELOVL4Q9GZR5 314 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 PORCNQ9H237 461 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 PCDH18Q9HCL0 1135 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 TIMMDC1Q9NPL8 285 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 MOCS1Q9NZB8 636 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 CLEC11AQ9Y240 323 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 SNX13Q9Y5W8 968 aa14.52□□□□□ -0.09
COL16A1-214ENST00000488128 VARSP26640 1264 aaKnown RBP14.51□□□□□ -0.09
COL16A1-214ENST00000488128 MAGEA8P43361 318 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 ZNF143P52747 638 aaPredicted RBP14.51□□□□□ -0.09
COL16A1-214ENST00000488128 ZNF280AP59817 542 aaPredicted RBP14.51□□□□□ -0.09
COL16A1-214ENST00000488128 ART3Q13508 389 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 APOFQ13790 326 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 DLK2Q6UY11 383 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 FAM110BQ8TC76 370 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 CDH19Q9H159 772 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 ZNF696Q9H7X3 374 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 WDR41Q9HAD4 459 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 MKS1Q9NXB0 559 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 ANKRD12Q6UB98 2062 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 ARHGEF37A1IGU5 675 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 CKMT2P17540 419 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 RALGDSQ12967 914 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 FAM47CQ5HY64 1035 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 KRT80Q6KB66 452 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 LAYNQ6UX15 382 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 WDR49Q8IV35 697 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 SPATA6LQ8N4H0 392 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 DCLK2Q8N568 766 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 SLC4A11Q8NBS3 891 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 REPS2Q8NFH8 660 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 FNIP1Q8TF40 1166 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 PDCD6IPQ8WUM4 868 aaKnown RBP14.51□□□□□ -0.09
COL16A1-214ENST00000488128 SLC29A1Q99808 456 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 TRPV6Q9H1D0 765 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 SNX15Q9NRS6 342 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 DCDC2Q9UHG0 476 aa14.51□□□□□ -0.09
COL16A1-214ENST00000488128 TMEM233B4DJY2 109 aa14.5□□□□□ -0.09
COL16A1-214ENST00000488128 B4GALT5O43286 388 aa14.5□□□□□ -0.09
COL16A1-214ENST00000488128 CXCL8P10145 99 aa14.5□□□□□ -0.09
COL16A1-214ENST00000488128 CYP2F1P24903 491 aa14.5□□□□□ -0.09
COL16A1-214ENST00000488128 GRK2P25098 689 aa14.5□□□□□ -0.09
COL16A1-214ENST00000488128 CNTN2Q02246 1040 aa14.5□□□□□ -0.09
COL16A1-214ENST00000488128 PTPN11Q06124 597 aaPredicted RBP14.5□□□□□ -0.09
COL16A1-214ENST00000488128 CDK18Q07002 472 aa14.5□□□□□ -0.09
COL16A1-214ENST00000488128 ITGA7Q13683 1181 aa14.5□□□□□ -0.09
COL16A1-214ENST00000488128 SLC44A4Q53GD3 710 aa14.5□□□□□ -0.09
COL16A1-214ENST00000488128 XKR3Q5GH77 459 aa14.5□□□□□ -0.09
COL16A1-214ENST00000488128 POTEHQ6S545 545 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms