RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 RXRAP19793 462 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 SCP2P22307 547 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 NDUFS1P28331 727 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 RCAN1P53805 252 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 OAZ1P54368 228 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 PRKAA2P54646 552 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 FHL3Q13643 280 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 SMAD1Q15797 465 aaKnown RBP4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 GALNTL6Q49A17 601 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 SHC4Q6S5L8 630 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 SLC39A5Q6ZMH5 540 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 SYNE3Q6ZMZ3 975 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 OR4N4Q8N0Y3 316 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 C8orf58Q8NAV2 365 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 USP38Q8NB14 1042 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 SLC2A12Q8TD20 617 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 ASB12Q8WXK4 309 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 KAT2BQ92831 832 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 TBATAQ96M53 351 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 ASB2Q96Q27 587 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 SFXN1Q9H9B4 322 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 ITM2CQ9NQX7 267 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 ASNSD1Q9NWL6 643 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 RRN3Q9NYV6 651 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 PI4KBQ9UBF8 816 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 IPO11Q9UI26 975 aaKnown RBP4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 SLC12A4Q9UP95 1085 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 DERAQ9Y315 318 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 LRRFIP2Q9Y608 721 aaKnown RBP4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 CACNA1IQ9P0X4 2223 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 SAC3D1A6NKF1 404 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 ANP32CO43423 234 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 BCAR3O75815 825 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 CYP3A4P08684 503 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 CD63P08962 238 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 PNLIPRP1P54315 467 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 RPL15P61313 204 aaKnown RBP4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 UBE3AQ05086 875 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 CUL4BQ13620 913 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 SLC12A1Q13621 1099 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 FAM110CQ1W6H9 321 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 RUNDC3AQ59EK9 446 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 CYP26C1Q6V0L0 522 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 RANBP10Q6VN20 620 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 SYT13Q7L8C5 426 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 ENDOVQ8N8Q3 282 aaKnown RBP4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 UBXN10Q96LJ8 280 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 ABHD14AQ9BUJ0 271 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 CHODLQ9H9P2 273 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 PDE11AQ9HCR9 933 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 SLC25A13Q9UJS0 675 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 KCND3Q9UK17 655 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 FEM1BQ9UK73 627 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 GPR52Q9Y2T5 361 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 WDR17Q8IZU2 1322 aa4.18□□□□□ -1.74
HMGB1P36-201ENST00000487709 E5RJQ4 531 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 NCAM2O15394 837 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 ENO1P06733 434 aaKnown RBP4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 AKR1A1P14550 325 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 HOXD12P35452 270 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 AGTR2P50052 363 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 PDCLQ13371 301 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 ZNF268Q14587 947 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 ANXA2RQ3ZCQ2 193 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 C16orf89Q6UX73 402 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 MMS22LQ6ZRQ5 1243 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 MRPL10Q7Z7H8 261 aaKnown RBP4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 LRRTM4Q86VH4 590 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 LAS2Q8IYD9 372 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 PTGR2Q8N8N7 351 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 FAM47BQ8NA70 645 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 OR1N1Q8NGS0 311 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 SH3KBP1Q96B97 665 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 ZNF845Q96IR2 970 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 MARK4Q96L34 752 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 COG8Q96MW5 612 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 MECRQ9BV79 373 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 ELOVL1Q9BW60 279 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 TWSG1Q9GZX9 223 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 RIC8AQ9NPQ8 531 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 SLC13A4Q9UKG4 626 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 COPG1Q9Y678 874 aaKnown RBP4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 EMSYQ7Z589 1322 aa4.17□□□□□ -1.74
HMGB1P36-201ENST00000487709 RRN3P2A6NIE6 340 aa4.16□□□□□ -1.74
HMGB1P36-201ENST00000487709 AGAP5A6NIR3 686 aa4.16□□□□□ -1.74
HMGB1P36-201ENST00000487709 DSCR3O14972 297 aa4.16□□□□□ -1.74
HMGB1P36-201ENST00000487709 SGPL1O95470 568 aa4.16□□□□□ -1.74
HMGB1P36-201ENST00000487709 IFIT1P09914 478 aaKnown RBP4.16□□□□□ -1.74
HMGB1P36-201ENST00000487709 TGM2P21980 687 aa4.16□□□□□ -1.74
HMGB1P36-201ENST00000487709 PNPLA4P41247 253 aa4.16□□□□□ -1.74
HMGB1P36-201ENST00000487709 SLC12A2P55011 1212 aa4.16□□□□□ -1.74
HMGB1P36-201ENST00000487709 VAMP2P63027 116 aa4.16□□□□□ -1.74
HMGB1P36-201ENST00000487709 TLE2Q04725 743 aa4.16□□□□□ -1.74
HMGB1P36-201ENST00000487709 TRPC3Q13507 836 aa4.16□□□□□ -1.74
HMGB1P36-201ENST00000487709 ALKBH1Q13686 389 aaKnown RBP4.16□□□□□ -1.74
HMGB1P36-201ENST00000487709 KPNB1Q14974 876 aaKnown RBP4.16□□□□□ -1.74
HMGB1P36-201ENST00000487709 NAA35Q5VZE5 725 aa4.16□□□□□ -1.74
HMGB1P36-201ENST00000487709 DHRS13Q6UX07 377 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms