RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 CAVIN1Q6NZI2 390 aaKnown RBP11.82□□□□□ -0.52
SPEN-205ENST00000487496 SLC23A3Q6PIS1 610 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 C14orf80Q86SX3 495 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 APCDD1Q8J025 514 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 CCAR2Q8N163 923 aaKnown RBP11.82□□□□□ -0.52
SPEN-205ENST00000487496 KDM1BQ8NB78 822 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 MSANTD4Q8NCY6 345 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 FOXJ1Q92949 421 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 IGSF8Q969P0 613 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 PGAP3Q96FM1 320 aaPredicted RBP11.82□□□□□ -0.52
SPEN-205ENST00000487496 MRGPRX3Q96LB0 322 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 HSPA12BQ96MM6 686 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 RPRD1AQ96P16 312 aaPredicted RBP11.82□□□□□ -0.52
SPEN-205ENST00000487496 TBCBQ99426 244 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 BPIFA3Q9BQP9 254 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 GPR174Q9BXC1 333 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 TKTL2Q9H0I9 626 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 MTG2Q9H4K7 406 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 WDCPQ9H6R7 721 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 FBRSQ9HAH7 460 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 ANLNQ9NQW6 1124 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 PIGVQ9NUD9 493 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 ARHGEF38Q9NXL2 777 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 TMEM59LQ9UK28 342 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 VANGL2Q9ULK5 521 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 ERVW-1Q9UQF0 538 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 HS3ST4Q9Y661 456 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 CKAP5Q14008 2032 aa11.82□□□□□ -0.52
SPEN-205ENST00000487496 I6L893 689 aaPredicted RBP11.81□□□□□ -0.52
SPEN-205ENST00000487496 CDX4O14627 284 aaPredicted RBP11.81□□□□□ -0.52
SPEN-205ENST00000487496 F9P00740 461 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 SRPRAP08240 638 aaKnown RBP11.81□□□□□ -0.52
SPEN-205ENST00000487496 PDGFRAP16234 1089 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 MMP8P22894 467 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 GGCXP38435 758 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 IRAK1P51617 712 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 PLK1P53350 603 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 RPS14P62263 151 aaKnown RBP11.81□□□□□ -0.52
SPEN-205ENST00000487496 CENPCQ03188 943 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 ZBTB16Q05516 673 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 DEUP1Q05D60 604 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 SLC12A1Q13621 1099 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 ARID5BQ14865 1188 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 DUOXA1Q1HG43 343 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 HNRNPA1L2Q32P51 320 aaKnown RBP11.81□□□□□ -0.52
SPEN-205ENST00000487496 C5orf22Q49AR2 442 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 PPM1JQ5JR12 505 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 BRMS1LQ5PSV4 323 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 CXorf57Q6NSI4 855 aaKnown RBP11.81□□□□□ -0.52
SPEN-205ENST00000487496 TRNP1Q6NT89 227 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 TRIM72Q6ZMU5 477 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 SND1Q7KZF4 910 aaKnown RBP eCLIP11.81□□□□□ -0.52
SPEN-205ENST00000487496 DHX40Q8IX18 779 aaKnown RBP11.81□□□□□ -0.52
SPEN-205ENST00000487496 CADM4Q8NFZ8 388 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 SLC30A5Q8TAD4 765 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 CEP76Q8TAP6 659 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 PCDHB18PQ96TA0 734 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 NUP58Q9BVL2 599 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 NUSAP1Q9BXS6 441 aaKnown RBP11.81□□□□□ -0.52
SPEN-205ENST00000487496 SIK2Q9H0K1 926 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 TMEM9BQ9NQ34 198 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 SLCO3A1Q9UIG8 710 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 SLC6A14Q9UN76 642 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 PAXBP1Q9Y5B6 917 aa11.81□□□□□ -0.52
SPEN-205ENST00000487496 MUC22E2RYF6 1773 aaPredicted RBP11.81□□□□□ -0.52
SPEN-205ENST00000487496 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.8□□□□□ -0.52
SPEN-205ENST00000487496 SMTNL1A8MU46 457 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 METTL12A8MUP2 240 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 TTC34A8MYJ7 566 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 SIN3BO75182 1162 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 DNTTP04053 509 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 CFIP05156 583 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 SERPINF2P08697 491 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 UNGP13051 313 aaPredicted RBP11.8□□□□□ -0.52
SPEN-205ENST00000487496 ENGP17813 658 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 MAOBP27338 520 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 MZF1P28698 734 aaPredicted RBP11.8□□□□□ -0.52
SPEN-205ENST00000487496 NUMBP49757 651 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 OXCT1P55809 520 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 ECT2LQ008S8 904 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 ZNF177Q13360 481 aaPredicted RBP11.8□□□□□ -0.52
SPEN-205ENST00000487496 WDR45BQ5MNZ6 344 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 SYCP2LQ5T4T6 812 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 ARCQ7LC44 396 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 BNIPLQ7Z465 357 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 PHLDB2Q86SQ0 1253 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 FAM124AQ86V42 546 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 RGL4Q8IZJ4 473 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 EMC1Q8N766 993 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 OR52K2Q8NGK3 314 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 DNASE2BQ8WZ79 361 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 ALG14Q96F25 216 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 C11orf70Q9BRQ4 267 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 RSPH9Q9H1X1 276 aaPredicted RBP11.8□□□□□ -0.52
SPEN-205ENST00000487496 CAPN10Q9HC96 672 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 TMEM51Q9NW97 253 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 TNRC6BQ9UPQ9 1833 aaKnown RBP11.8□□□□□ -0.52
SPEN-205ENST00000487496 SPTBN2O15020 2390 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 NCOR2Q9Y618 2525 aa11.8□□□□□ -0.52
SPEN-205ENST00000487496 TARSL2A2RTX5 802 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms