RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 OR1E1P30953 314 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 CD70P32970 193 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 GRIA2P42262 883 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 SEC13P55735 322 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 SEMA3BQ13214 749 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 LRRC32Q14392 662 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 DPYSL2Q16555 572 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 GEN1Q17RS7 908 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 C5orf22Q49AR2 442 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 ATP13A4Q4VNC1 1196 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 FSCBQ5H9T9 825 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 TMEM196Q5HYL7 178 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 CWF19L1Q69YN2 538 aaKnown RBP13.13□□□□□ -0.31
PRDM2-208ENST00000487453 ASTLQ6HA08 431 aaPredicted RBP13.13□□□□□ -0.31
PRDM2-208ENST00000487453 FSTL4Q6MZW2 842 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 RFX8Q6ZV50 586 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 POLNQ7Z5Q5 900 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 SFTPA1Q8IWL2 248 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 SYCE1Q8N0S2 351 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 AHI1Q8N157 1196 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 PHTF2Q8N3S3 785 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 KCTD6Q8NC69 237 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 ALS2CR12Q96Q35 445 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 CIPCQ9C0C6 399 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 CATSPERBQ9H7T0 1116 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 PCDH18Q9HCL0 1135 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 RBM12Q9NTZ6 932 aaKnown RBP13.13□□□□□ -0.31
PRDM2-208ENST00000487453 DNAI1Q9UI46 699 aa13.13□□□□□ -0.31
PRDM2-208ENST00000487453 MTF2Q9Y483 593 aaPredicted RBP13.13□□□□□ -0.31
PRDM2-208ENST00000487453 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.13□□□□□ -0.31
PRDM2-208ENST00000487453 MYOFQ9NZM1 2061 aa13.12□□□□□ -0.31
PRDM2-208ENST00000487453 LRRD1A4D1F6 860 aa13.12□□□□□ -0.31
PRDM2-208ENST00000487453 PSTPIP1O43586 416 aa13.12□□□□□ -0.31
PRDM2-208ENST00000487453 FTCDO95954 541 aa13.12□□□□□ -0.31
PRDM2-208ENST00000487453 HTR7P34969 479 aa13.12□□□□□ -0.31
PRDM2-208ENST00000487453 CSKP41240 450 aa13.12□□□□□ -0.31
PRDM2-208ENST00000487453 LMAN2Q12907 356 aa13.12□□□□□ -0.31
PRDM2-208ENST00000487453 FUT11Q495W5 492 aa13.12□□□□□ -0.31
PRDM2-208ENST00000487453 C6orf118Q5T5N4 469 aa13.12□□□□□ -0.31
PRDM2-208ENST00000487453 RNF43Q68DV7 783 aa13.12□□□□□ -0.31
PRDM2-208ENST00000487453 CXorf57Q6NSI4 855 aaKnown RBP13.12□□□□□ -0.31
PRDM2-208ENST00000487453 PEX26Q7Z412 305 aa13.12□□□□□ -0.31
PRDM2-208ENST00000487453 CCDC105Q8IYK2 499 aa13.12□□□□□ -0.31
PRDM2-208ENST00000487453 RNF10Q8N5U6 811 aaKnown RBP13.12□□□□□ -0.31
PRDM2-208ENST00000487453 FIBINQ8TAL6 211 aa13.12□□□□□ -0.31
PRDM2-208ENST00000487453 PBXIP1Q96AQ6 731 aa13.12□□□□□ -0.31
PRDM2-208ENST00000487453 NELL2Q99435 816 aa13.12□□□□□ -0.31
PRDM2-208ENST00000487453 MUC3BQ9H195 1237 aa13.12□□□□□ -0.31
PRDM2-208ENST00000487453 TMEM248Q9NWD8 314 aa13.12□□□□□ -0.31
PRDM2-208ENST00000487453 TRMT1Q9NXH9 659 aaKnown RBP13.12□□□□□ -0.31
PRDM2-208ENST00000487453 DDX56Q9NY93 547 aaKnown RBP13.12□□□□□ -0.31
PRDM2-208ENST00000487453 CWC15Q9P013 229 aaKnown RBP13.12□□□□□ -0.31
PRDM2-208ENST00000487453 KIAA1522Q9P206 1035 aaPredicted RBP13.12□□□□□ -0.31
PRDM2-208ENST00000487453 FBXO10Q9UK96 956 aa13.12□□□□□ -0.31
PRDM2-208ENST00000487453 PYCARDQ9ULZ3 195 aa13.12□□□□□ -0.31
PRDM2-208ENST00000487453 SLC27A6Q9Y2P4 619 aa13.12□□□□□ -0.31
PRDM2-208ENST00000487453 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.12□□□□□ -0.31
PRDM2-208ENST00000487453 SIT1Q9Y3P8 196 aa13.12□□□□□ -0.31
PRDM2-208ENST00000487453 PRRT4C9JH25 899 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 NCAM2O15394 837 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 RNF40O75150 1001 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 DCNP07585 359 aaKnown RBP13.11□□□□□ -0.31
PRDM2-208ENST00000487453 CD48P09326 243 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 CISD3P0C7P0 127 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 HOXC13P31276 330 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 MARCKSL1P49006 195 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 MAPKAPK2P49137 400 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 ZNF135P52742 658 aaPredicted RBP13.11□□□□□ -0.31
PRDM2-208ENST00000487453 OXCT1P55809 520 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 MMRN1Q13201 1228 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 CCINQ13939 588 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 PDK2Q15119 407 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 PITRM1Q5JRX3 1037 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 LRRC38Q5VT99 294 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 RNF219Q5W0B1 726 aaPredicted RBP13.11□□□□□ -0.31
PRDM2-208ENST00000487453 ZNF662Q6ZS27 426 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 SETD3Q86TU7 594 aaPredicted RBP13.11□□□□□ -0.31
PRDM2-208ENST00000487453 ZNF354CQ86Y25 554 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 CCDC50Q8IVM0 306 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 MAP7D3Q8IWC1 876 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 RTL3Q8N8U3 475 aaKnown RBP13.11□□□□□ -0.31
PRDM2-208ENST00000487453 LRRC57Q8N9N7 239 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 OR52K2Q8NGK3 314 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 WFIKKN2Q8TEU8 576 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 EZH1Q92800 747 aaPredicted RBP13.11□□□□□ -0.31
PRDM2-208ENST00000487453 CSPG4P5Q96PW8 444 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 LMAN1LQ9HAT1 526 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 VPS28Q9UK41 221 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 AMFRQ9UKV5 643 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 PACSIN2Q9UNF0 486 aaPredicted RBP13.11□□□□□ -0.31
PRDM2-208ENST00000487453 MUC22E2RYF6 1773 aaPredicted RBP13.11□□□□□ -0.31
PRDM2-208ENST00000487453 DOCK4Q8N1I0 1966 aa13.11□□□□□ -0.31
PRDM2-208ENST00000487453 CCDC66A2RUB6 948 aa13.1□□□□□ -0.31
PRDM2-208ENST00000487453 K7EQS6 105 aa13.1□□□□□ -0.31
PRDM2-208ENST00000487453 RAMP2O60895 175 aa13.1□□□□□ -0.31
PRDM2-208ENST00000487453 CHRNB1P11230 501 aa13.1□□□□□ -0.31
PRDM2-208ENST00000487453 ERCC2P18074 760 aa13.1□□□□□ -0.31
PRDM2-208ENST00000487453 POLR2EP19388 210 aaKnown RBP13.1□□□□□ -0.31
PRDM2-208ENST00000487453 MZF1P28698 734 aaPredicted RBP13.1□□□□□ -0.31
PRDM2-208ENST00000487453 CTNNA1P35221 906 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms