RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 VPS45Q9NRW7 570 aa5.51□□□□□ -1.53
R3HDM1-218ENST00000487294 RXFP3Q9NSD7 469 aa5.51□□□□□ -1.53
R3HDM1-218ENST00000487294 RBM12Q9NTZ6 932 aaKnown RBP5.51□□□□□ -1.53
R3HDM1-218ENST00000487294 C2orf42Q9NWW7 574 aa5.51□□□□□ -1.53
R3HDM1-218ENST00000487294 GTSE1Q9NYZ3 720 aa5.51□□□□□ -1.53
R3HDM1-218ENST00000487294 NTMQ9P121 344 aa5.51□□□□□ -1.53
R3HDM1-218ENST00000487294 NUB1Q9Y5A7 615 aa5.51□□□□□ -1.53
R3HDM1-218ENST00000487294 TMEM8BA6NDV4 472 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 FAM47E-STBD1D6RA91 191 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 AQP7O14520 342 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 FAM189A1O60320 539 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 RPP40O75818 363 aaKnown RBP5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 OR52Z1P0C646 297 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 GJA1P17302 382 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 CSRP1P21291 193 aaKnown RBP5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 RPL13P26373 211 aaKnown RBP5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 MARCKSP29966 332 aaPredicted RBP5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 MCM7P33993 719 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 ALDH1A3P47895 512 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 MCM2P49736 904 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 KPNA1P52294 538 aaPredicted RBP5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 ARPP19P56211 112 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 POU5F1Q01860 360 aaKnown RBP5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 MCL1Q07820 350 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 SMARCB1Q12824 385 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 MAPK7Q13164 816 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 DMP1Q13316 513 aaPredicted RBP5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 RTP5Q14D33 572 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 SF3A2Q15428 464 aaKnown RBP5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 KYAT1Q16773 422 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 ME3Q16798 604 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 ITPRIPL2Q3MIP1 535 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 PLK5Q496M5 336 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 FBXO43Q4G163 708 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 AASDHQ4L235 1098 aaPredicted RBP5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 C1orf186Q6ZWK4 172 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 ITIH5Q86UX2 942 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 KBTBD6Q86V97 674 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 ZNF761Q86XN6 746 aaPredicted RBP5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 BPIFB1Q8TDL5 484 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 ADAMTS17Q8TE56 1095 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 C2orf15Q8WU43 125 aaKnown RBP5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 C18orf25Q96B23 403 aaPredicted RBP5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 DRC1Q96MC2 740 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 YTHDC1Q96MU7 727 aaKnown RBP5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 TARS2Q9BW92 718 aaKnown RBP5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 ARRDC1-AS1Q9H2J1 176 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 FOXP1Q9H334 677 aaPredicted RBP5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 HSPBP1Q9NZL4 362 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 KCND2Q9NZV8 630 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 UBQLN1Q9UMX0 589 aaKnown RBP5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 DMXL2Q8TDJ6 3036 aa5.5□□□□□ -1.53
R3HDM1-218ENST00000487294 DSPP15924 2871 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 EML5Q05BV3 1969 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 WDFY3Q8IZQ1 3526 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 BCLAF3A2AJT9 711 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 MTMR11A4FU01 709 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 CCDC169A6NNP5 214 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 LAD1O00515 517 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 CLDN3O15551 220 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 XPOTO43592 962 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 EXTL3O43909 919 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 NOBOXO60393 691 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 LARGE1O95461 756 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 PRAMEF12O95522 483 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 PIGRP01833 764 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 CLTAP09496 248 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 CEACAM1P13688 526 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 DRD1P21728 446 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 DDX6P26196 483 aaKnown RBP eCLIP5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 GABRR2P28476 465 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 CDC25AP30304 524 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 CDC25CP30307 473 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 MPLP40238 635 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 TUFMP49411 452 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 PEX3P56589 373 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 LILRA4P59901 499 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 GABREP78334 506 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 GRSF1Q12849 480 aaKnown RBP eCLIP5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 PAK1Q13153 545 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 ZNF268Q14587 947 aaPredicted RBP5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 NOLC1Q14978 699 aaKnown RBP eCLIP5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 KARSQ15046 597 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 PON2Q15165 354 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 ARHGAP15Q53QZ3 475 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 HYIQ5T013 277 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 STXBP5Q5T5C0 1151 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 FSTL4Q6MZW2 842 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 RINT1Q6NUQ1 792 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 PKN3Q6P5Z2 889 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 UNQ6494/PRO21346Q6UXR6 183 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 SYT13Q7L8C5 426 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 USP37Q86T82 979 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 MTDHQ86UE4 582 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 C11orf74Q86VG3 221 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 PROSER1Q86XN7 944 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 CD302Q8IX05 232 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 CMTM8Q8IZV2 173 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 LILRB2Q8N423 598 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 KIAA1958Q8N8K9 716 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms