RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 GRTP1Q5TC63 336 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 TRIM68Q6AZZ1 485 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 GPRIN1Q7Z2K8 1008 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 ARHGAP24Q8N264 748 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 NTAN1Q96AB6 310 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 KCNK16Q96T55 309 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 SORT1Q99523 831 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 CPNE1Q99829 537 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 SMOQ99835 787 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 FAM167BQ9BTA0 163 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 TMEM30AQ9NV96 361 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 DDX43Q9NXZ2 648 aaKnown RBP12.63□□□□□ -0.39
PTCD2-204ENST00000486995 FLRT1Q9NZU1 646 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 ZNF638Q14966 1978 aaKnown RBP12.63□□□□□ -0.39
PTCD2-204ENST00000486995 MEIS3P2A8K0S8 358 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 CAPN9O14815 690 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 AP2A1O95782 977 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 SERPINE1P05121 402 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 ZNF865P0CJ78 1059 aaPredicted RBP12.63□□□□□ -0.39
PTCD2-204ENST00000486995 AIF1P55008 147 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 SLC34A1Q06495 639 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 SCAPQ12770 1279 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 THOC5Q13769 683 aaKnown RBP12.63□□□□□ -0.39
PTCD2-204ENST00000486995 CCDC6Q16204 474 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 RABGAP1LQ5R372 815 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 SNX30Q5VWJ9 437 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 TWF2Q6IBS0 349 aaKnown RBP12.63□□□□□ -0.39
PTCD2-204ENST00000486995 MAVSQ7Z434 540 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 TMEM135Q86UB9 458 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 NPWQ8N729 165 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 ZMIZ2Q8NF64 920 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 DNAJC9Q8WXX5 260 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 ZNF333Q96JL9 665 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 ZNF358Q9NW07 568 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 NMRK1Q9NWW6 199 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 TXNDC16Q9P2K2 825 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 STX18Q9P2W9 335 aaKnown RBP12.63□□□□□ -0.39
PTCD2-204ENST00000486995 COPG2Q9UBF2 871 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 FBXW11Q9UKB1 542 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 TSC2P49815 1807 aa12.63□□□□□ -0.39
PTCD2-204ENST00000486995 C9IYK1 514 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 LIN7AO14910 233 aaPredicted RBP12.62□□□□□ -0.39
PTCD2-204ENST00000486995 TM7SF2O76062 418 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 FBXO21O94952 628 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 ACADSP16219 412 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 AOC1P19801 751 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 CD68P34810 354 aaPredicted RBP12.62□□□□□ -0.39
PTCD2-204ENST00000486995 VHLP40337 213 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 MAGEA12P43365 314 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 CACNA2D1P54289 1103 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 GJA9P57773 515 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 PPIDQ08752 370 aaKnown RBP12.62□□□□□ -0.39
PTCD2-204ENST00000486995 KCTD11Q693B1 232 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 CTU1Q7Z7A3 348 aaKnown RBP12.62□□□□□ -0.39
PTCD2-204ENST00000486995 CMC1Q7Z7K0 106 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 SCUBE1Q8IWY4 988 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 GSTCDQ8NEC7 633 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 DTX3LQ8TDB6 740 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 ISL2Q96A47 359 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 CLPTM1LQ96KA5 538 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 SENP8Q96LD8 212 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 FAM161BQ96MY7 647 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 PARK7Q99497 189 aaKnown RBP12.62□□□□□ -0.39
PTCD2-204ENST00000486995 TSPYL2Q9H2G4 693 aaPredicted RBP12.62□□□□□ -0.39
PTCD2-204ENST00000486995 LRRC40Q9H9A6 602 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 PNPOQ9NVS9 261 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 SORCS3Q9UPU3 1222 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 ZCWPW2A0A1B0GU75 182 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 E2F8A0AVK6 867 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 MYBPHLA2RUH7 354 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 F8W8V4 182 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 NVLO15381 856 aaKnown RBP12.62□□□□□ -0.39
PTCD2-204ENST00000486995 ZBTB24O43167 697 aaPredicted RBP12.62□□□□□ -0.39
PTCD2-204ENST00000486995 SMNDC1O75940 238 aaKnown RBP eCLIP12.62□□□□□ -0.39
PTCD2-204ENST00000486995 MYL3P08590 195 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 NCAM1P13591 858 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 HCAR3P49019 387 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 AFF1P51825 1210 aaKnown RBP12.62□□□□□ -0.39
PTCD2-204ENST00000486995 TPI1P60174 286 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 BEX3Q00994 111 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 ANO7Q6IWH7 933 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 PDZD4Q76G19 769 aaPredicted RBP12.62□□□□□ -0.39
PTCD2-204ENST00000486995 DCLK2Q8N568 766 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 OR6Y1Q8NGX8 325 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 PCED1BQ96HM7 432 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 RBBP8Q99708 897 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 C1orf21Q9H246 121 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 STN1Q9H668 368 aaKnown RBP12.62□□□□□ -0.39
PTCD2-204ENST00000486995 CASS4Q9NQ75 786 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 SNX15Q9NRS6 342 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 VANGL2Q9ULK5 521 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 RAD54BQ9Y620 910 aa12.62□□□□□ -0.39
PTCD2-204ENST00000486995 TRIP12Q14669 1992 aaPredicted RBP12.61□□□□□ -0.39
PTCD2-204ENST00000486995 ZNF195O14628 629 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 AP1G2O75843 785 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 F7P08709 466 aaPredicted RBP12.61□□□□□ -0.39
PTCD2-204ENST00000486995 USP17L7P0C7H9 530 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 CYP2B6P20813 491 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 GRK2P25098 689 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 CPOXP36551 454 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms