RNA–Protein interactions for RNA: ENST00000486927.1

ATL2-215, Transcript of atlastin GTPase 2, human

TSL 4

Gene ATL2, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL2-215	ENST00000486927	GDF3	Q9NR23	364 aa		13.24	□□□□□ -0.29
ATL2-215	ENST00000486927	STIM2	Q9P246	746 aa		13.24	□□□□□ -0.29
ATL2-215	ENST00000486927	AK5	Q9Y6K8	562 aa		13.24	□□□□□ -0.29
ATL2-215	ENST00000486927	CABIN1	Q9Y6J0	2220 aa		13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	TTC34	A8MYJ7	566 aa		13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	CETN3	O15182	167 aa		13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	RRP8	O43159	456 aa	Known RBP	13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	CKMT2	P17540	419 aa		13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	C5AR1	P21730	350 aa		13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	EPHA8	P29322	1005 aa	Predicted RBP	13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	CTSO	P43234	321 aa	Predicted RBP	13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	SYK	P43405	635 aa		13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	NDUFA8	P51970	172 aa		13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	TBX4	P57082	545 aa		13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	RPS24	P62847	133 aa	Known RBP	13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	MS4A13	Q5J8X5	152 aa		13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	PITRM1	Q5JRX3	1037 aa		13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	LRRC69	Q6ZNQ3	347 aa		13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	MMS22L	Q6ZRQ5	1243 aa		13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	SPATS2	Q86XZ4	545 aa	Known RBP	13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	HJURP	Q8NCD3	748 aa	Predicted RBP	13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	SNIP1	Q8TAD8	396 aa	Known RBP	13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	PTPRN2	Q92932	1015 aa		13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	CCDC47	Q96A33	483 aa	Known RBP	13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	FCRL2	Q96LA5	508 aa	Predicted RBP	13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	DDX50	Q9BQ39	737 aa	Known RBP	13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	AASDHPPT	Q9NRN7	309 aa		13.23	□□□□□ -0.29
ATL2-215	ENST00000486927	ITIH6	Q6UXX5	1313 aa		13.22	□□□□□ -0.29
ATL2-215	ENST00000486927	EDDM13	A0A1B0GTR0	161 aa		13.22	□□□□□ -0.29
ATL2-215	ENST00000486927	RNF225	M0QZC1	329 aa	Predicted RBP	13.22	□□□□□ -0.29
ATL2-215	ENST00000486927	PAEP	P09466	180 aa		13.22	□□□□□ -0.29
ATL2-215	ENST00000486927	CD19	P15391	556 aa		13.22	□□□□□ -0.29
ATL2-215	ENST00000486927	RPL34	P49207	117 aa	Known RBP	13.22	□□□□□ -0.29
ATL2-215	ENST00000486927	ECT2L	Q008S8	904 aa		13.22	□□□□□ -0.29
ATL2-215	ENST00000486927	HES3	Q5TGS1	186 aa		13.22	□□□□□ -0.29
ATL2-215	ENST00000486927	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
ATL2-215	ENST00000486927	IQCH	Q86VS3	1027 aa		13.22	□□□□□ -0.29
ATL2-215	ENST00000486927	DCBLD1	Q8N8Z6	715 aa		13.22	□□□□□ -0.29
ATL2-215	ENST00000486927	OR14C36	Q8NHC7	312 aa		13.22	□□□□□ -0.29
ATL2-215	ENST00000486927	SERAC1	Q96JX3	654 aa		13.22	□□□□□ -0.29
ATL2-215	ENST00000486927	HSFY1	Q96LI6	401 aa		13.22	□□□□□ -0.29
ATL2-215	ENST00000486927	KDM4C	Q9H3R0	1056 aa		13.22	□□□□□ -0.29
ATL2-215	ENST00000486927	TLR6	Q9Y2C9	796 aa		13.22	□□□□□ -0.29
ATL2-215	ENST00000486927	KNTC1	P50748	2209 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	TBC1D3D	A0A087WVF3	549 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	TBC1D3I	A0A087WXS9	549 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	TBC1D3E	A0A087X179	549 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	TBC1D3K	A0A087X1G2	549 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	TBC1D3L	B9A6J9	549 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	PMM2	O15305	246 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	FBXO21	O94952	628 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	ADH1B	P00325	375 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	LTF	P02788	710 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	TBC1D3H	P0C7X1	549 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	EPB41	P11171	864 aa	Known RBP	13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	ACP1	P24666	158 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	RGS7	P49802	495 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	PLK1	P53350	603 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	ADPRH	P54922	357 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	YWHAE	P62258	255 aa	Known RBP	13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	NNT	Q13423	1086 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	DCAF6	Q58WW2	860 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	SLC45A4	Q5BKX6	768 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	TBC1D3G	Q6DHY5	549 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	TBC1D3C	Q6IPX1	549 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	PCSK4	Q6UW60	755 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	KRBA2	Q6ZNG9	492 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	BEND5	Q7L4P6	421 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	APCDD1	Q8J025	514 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	CFAP52	Q8N1V2	620 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	STK40	Q8N2I9	435 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	SLC25A45	Q8N413	288 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	CARNMT1	Q8N4J0	409 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	CLEC4C	Q8WTT0	213 aa		13.21	□□□□□ -0.29
ATL2-215	ENST00000486927	KALRN	O60229	2985 aa		13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	PTPRB	P23467	1997 aa		13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	TEX51	A0A1B0GUA7	166 aa		13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	LUC7L3	O95232	432 aa	Known RBP	13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	TBXAS1	P24557	533 aa	Predicted RBP	13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	DRD3	P35462	400 aa		13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	NUDT1	P36639	197 aa		13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	VASP	P50552	380 aa	Predicted RBP	13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	E2F1	Q01094	437 aa		13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	INSM1	Q01101	510 aa	Predicted RBP	13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	TLE3	Q04726	772 aa		13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	OVGP1	Q12889	678 aa		13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	ZNF211	Q13398	564 aa	Predicted RBP	13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	PROX2	Q3B8N5	592 aa		13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	NAPEPLD	Q6IQ20	393 aa		13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	GPR155	Q7Z3F1	870 aa		13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	ZNF843	Q8N446	348 aa		13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	OXR1	Q8N573	874 aa		13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	DQX1	Q8TE96	717 aa	Known RBP	13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	FRS2	Q8WU20	508 aa		13.2	□□□□□ -0.3
ATL2-215	ENST00000486927	BAP1	Q92560	729 aa		13.2	□□□□□ -0.3

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