RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 CCDC186Q7Z3E2 898 aa15.81■□□□□ 0.12
U2AF1-211ENST00000486519 PLEKHO2Q8TD55 490 aa15.81■□□□□ 0.12
U2AF1-211ENST00000486519 CCDC127Q96BQ5 260 aa15.81■□□□□ 0.12
U2AF1-211ENST00000486519 MYEOVQ96EZ4 313 aa15.81■□□□□ 0.12
U2AF1-211ENST00000486519 KLHDC7BQ96G42 594 aa15.81■□□□□ 0.12
U2AF1-211ENST00000486519 TNIP3Q96KP6 325 aa15.81■□□□□ 0.12
U2AF1-211ENST00000486519 KLHL11Q9NVR0 708 aa15.81■□□□□ 0.12
U2AF1-211ENST00000486519 PCDHA5Q9Y5H7 936 aa15.81■□□□□ 0.12
U2AF1-211ENST00000486519 CRYBG3Q68DQ2 2970 aa15.8■□□□□ 0.12
U2AF1-211ENST00000486519 AGRPO00253 132 aa15.8■□□□□ 0.12
U2AF1-211ENST00000486519 STAU1O95793 577 aaKnown RBP15.8■□□□□ 0.12
U2AF1-211ENST00000486519 ATP5BP06576 529 aaKnown RBP15.8■□□□□ 0.12
U2AF1-211ENST00000486519 FAM200BP0CF97 657 aa15.8■□□□□ 0.12
U2AF1-211ENST00000486519 PRLRP16471 622 aa15.8■□□□□ 0.12
U2AF1-211ENST00000486519 CASP4P49662 377 aa15.8■□□□□ 0.12
U2AF1-211ENST00000486519 STAT4Q14765 748 aa15.8■□□□□ 0.12
U2AF1-211ENST00000486519 RFWD3Q6PCD5 774 aa15.8■□□□□ 0.12
U2AF1-211ENST00000486519 MMS22LQ6ZRQ5 1243 aa15.8■□□□□ 0.12
U2AF1-211ENST00000486519 CENPQQ7L2Z9 268 aaPredicted RBP15.8■□□□□ 0.12
U2AF1-211ENST00000486519 PRPF39Q86UA1 669 aaKnown RBP15.8■□□□□ 0.12
U2AF1-211ENST00000486519 JAMLQ86YT9 394 aa15.8■□□□□ 0.12
U2AF1-211ENST00000486519 SLC22A18ASQ8N1D0 253 aa15.8■□□□□ 0.12
U2AF1-211ENST00000486519 ZNF276Q8N554 614 aa15.8■□□□□ 0.12
U2AF1-211ENST00000486519 OR13H1Q8NG92 308 aa15.8■□□□□ 0.12
U2AF1-211ENST00000486519 NDRG1Q92597 394 aaKnown RBP15.8■□□□□ 0.12
U2AF1-211ENST00000486519 USP3Q9Y6I4 520 aa15.8■□□□□ 0.12
U2AF1-211ENST00000486519 MED13Q9UHV7 2174 aa15.8■□□□□ 0.12
U2AF1-211ENST00000486519 CELSR2Q9HCU4 2923 aa15.8■□□□□ 0.12
U2AF1-211ENST00000486519 CCDC187A0A096LP49 1063 aa15.79■□□□□ 0.12
U2AF1-211ENST00000486519 GOLGA6L7A0A1B0GV03 622 aa15.79■□□□□ 0.12
U2AF1-211ENST00000486519 RNASEH1O60930 286 aaKnown RBP15.79■□□□□ 0.12
U2AF1-211ENST00000486519 RALAP11233 206 aa15.79■□□□□ 0.12
U2AF1-211ENST00000486519 COL8A1P27658 744 aa15.79■□□□□ 0.12
U2AF1-211ENST00000486519 CSKP41240 450 aa15.79■□□□□ 0.12
U2AF1-211ENST00000486519 INHBCP55103 352 aa15.79■□□□□ 0.12
U2AF1-211ENST00000486519 OVGP1Q12889 678 aa15.79■□□□□ 0.12
U2AF1-211ENST00000486519 SURF1Q15526 300 aa15.79■□□□□ 0.12
U2AF1-211ENST00000486519 TRIP4Q15650 581 aaPredicted RBP15.79■□□□□ 0.12
U2AF1-211ENST00000486519 ARL6IP4Q66PJ3 421 aaKnown RBP15.79■□□□□ 0.12
U2AF1-211ENST00000486519 C14orf80Q86SX3 495 aa15.79■□□□□ 0.12
U2AF1-211ENST00000486519 TMEM145Q8NBT3 493 aa15.79■□□□□ 0.12
U2AF1-211ENST00000486519 TMA16Q96EY4 203 aaKnown RBP15.79■□□□□ 0.12
U2AF1-211ENST00000486519 CLIC5Q9NZA1 410 aa15.79■□□□□ 0.12
U2AF1-211ENST00000486519 SLCO3A1Q9UIG8 710 aa15.79■□□□□ 0.12
U2AF1-211ENST00000486519 SCAMP1O15126 338 aa15.78■□□□□ 0.12
U2AF1-211ENST00000486519 MZF1P28698 734 aaPredicted RBP15.78■□□□□ 0.12
U2AF1-211ENST00000486519 UGT1A5P35504 534 aa15.78■□□□□ 0.12
U2AF1-211ENST00000486519 UQCRFS1P47985 274 aa15.78■□□□□ 0.12
U2AF1-211ENST00000486519 NEK4P51957 841 aa15.78■□□□□ 0.12
U2AF1-211ENST00000486519 CLDN2P57739 230 aa15.78■□□□□ 0.12
U2AF1-211ENST00000486519 CYP24A1Q07973 514 aa15.78■□□□□ 0.12
U2AF1-211ENST00000486519 TRPC3Q13507 836 aa15.78■□□□□ 0.12
U2AF1-211ENST00000486519 PSMD6Q15008 389 aa15.78■□□□□ 0.12
U2AF1-211ENST00000486519 BMT2Q1RMZ1 405 aa15.78■□□□□ 0.12
U2AF1-211ENST00000486519 ZFAND4Q86XD8 727 aa15.78■□□□□ 0.12
U2AF1-211ENST00000486519 CRYBG2Q8N1P7 616 aa15.78■□□□□ 0.12
U2AF1-211ENST00000486519 PIAS4Q8N2W9 510 aaPredicted RBP15.78■□□□□ 0.12
U2AF1-211ENST00000486519 PTPRN2Q92932 1015 aa15.78■□□□□ 0.12
U2AF1-211ENST00000486519 TTC17Q96AE7 1141 aa15.78■□□□□ 0.12
U2AF1-211ENST00000486519 FAM131CQ96AQ9 280 aa15.78■□□□□ 0.12
U2AF1-211ENST00000486519 AK8Q96MA6 479 aa15.78■□□□□ 0.12
U2AF1-211ENST00000486519 CALN1Q9BXU9 219 aa15.78■□□□□ 0.12
U2AF1-211ENST00000486519 SARDHQ9UL12 918 aa15.78■□□□□ 0.12
U2AF1-211ENST00000486519 PCDHB13Q9Y5F0 798 aa15.78■□□□□ 0.12
U2AF1-211ENST00000486519 UBE4BO95155 1302 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 A1L4Q6 167 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 EME2A4GXA9 379 aaPredicted RBP15.77■□□□□ 0.12
U2AF1-211ENST00000486519 SLC31A1O15431 190 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 SLC26A4O43511 780 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 MAGEC1O60732 1142 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 TBL1XO60907 577 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 VNN1O95497 513 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 IL1BP01584 269 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 C5AR1P21730 350 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 SLC6A4P31645 630 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 MLLT3P42568 568 aaPredicted RBP15.77■□□□□ 0.12
U2AF1-211ENST00000486519 HARS2P49590 506 aaKnown RBP15.77■□□□□ 0.12
U2AF1-211ENST00000486519 SNRNP35Q16560 246 aaKnown RBP15.77■□□□□ 0.12
U2AF1-211ENST00000486519 ZNF699Q32M78 642 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 FSCBQ5H9T9 825 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 BHLHA9Q7RTU4 235 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 RASSF8Q8NHQ8 419 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 SYAP1Q96A49 352 aaPredicted RBP15.77■□□□□ 0.12
U2AF1-211ENST00000486519 MIB2Q96AX9 1013 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 PLD4Q96BZ4 506 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 EPSTI1Q96J88 318 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 VRTNQ9H8Y1 702 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 OLFML3Q9NRN5 406 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 SFMBT1Q9UHJ3 866 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 KLF15Q9UIH9 416 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 ERVW-1Q9UQF0 538 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 DMTF1Q9Y222 760 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 PCDHGA7Q9Y5G6 932 aa15.77■□□□□ 0.12
U2AF1-211ENST00000486519 SDK2Q58EX2 2172 aa15.77■□□□□ 0.11
U2AF1-211ENST00000486519 CENPEQ02224 2701 aa15.76■□□□□ 0.11
U2AF1-211ENST00000486519 PRAMEF26H0Y7S4 382 aa15.76■□□□□ 0.11
U2AF1-211ENST00000486519 PLD2O14939 933 aa15.76■□□□□ 0.11
U2AF1-211ENST00000486519 MUSKO15146 869 aa15.76■□□□□ 0.11
U2AF1-211ENST00000486519 MTSS1O43312 755 aa15.76■□□□□ 0.11
U2AF1-211ENST00000486519 MSI1O43347 362 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms