RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 NUSAP1Q9BXS6 441 aaKnown RBP13.3□□□□□ -0.28
CHMP3-208ENST00000486404 SIK2Q9H0K1 926 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 HSD3B7Q9H2F3 369 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 TMEM245Q9H330 911 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 WDCPQ9H6R7 721 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 CD93Q9NPY3 652 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 USP36Q9P275 1121 aaKnown RBP13.3□□□□□ -0.28
CHMP3-208ENST00000486404 SUN2Q9UH99 717 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 HS3ST4Q9Y661 456 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 TP53BP1Q12888 1972 aaPredicted RBP13.3□□□□□ -0.28
CHMP3-208ENST00000486404 LNP1A1A4G5 178 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 SYCE3A1L190 88 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 PATE3B3GLJ2 98 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 RNASEH1O60930 286 aaKnown RBP13.29□□□□□ -0.28
CHMP3-208ENST00000486404 DNTTP04053 509 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 CYP1A1P04798 512 aaPredicted RBP13.29□□□□□ -0.28
CHMP3-208ENST00000486404 MMP8P22894 467 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 ITPKAP23677 461 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 FLT3P36888 993 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 NNMTP40261 264 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 TPMTP51580 245 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 COPAP53621 1224 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 LIMK1P53667 647 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 ECT2LQ008S8 904 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 EIF4EBP2Q13542 120 aaPredicted RBP13.29□□□□□ -0.28
CHMP3-208ENST00000486404 SLC12A1Q13621 1099 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 KLHL40Q2TBA0 621 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 FSCBQ5H9T9 825 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 WDR45BQ5MNZ6 344 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 STPG1Q5TH74 334 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 FBXL22Q6P050 247 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 LRRC31Q6UY01 552 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 METTL3Q86U44 580 aaKnown RBP13.29□□□□□ -0.28
CHMP3-208ENST00000486404 FAM124AQ86V42 546 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 SLC30A5Q8TAD4 765 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 FOXJ1Q92949 421 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 TTC17Q96AE7 1141 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 TOE1Q96GM8 510 aaKnown RBP13.29□□□□□ -0.28
CHMP3-208ENST00000486404 CFAP57Q96MR6 1250 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 PPP1R9BQ96SB3 815 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 TKTL2Q9H0I9 626 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 SUSD2Q9UGT4 822 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 SLC25A13Q9UJS0 675 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 DCHS1Q96JQ0 3298 aa13.29□□□□□ -0.28
CHMP3-208ENST00000486404 GON4LQ3T8J9 2241 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.28□□□□□ -0.28
CHMP3-208ENST00000486404 DCDC2BA2VCK2 349 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 ANKRD62A6NC57 917 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 CLDN11O75508 207 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 SERPINC1P01008 464 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 CALB1P05937 261 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 SRPRAP08240 638 aaKnown RBP13.28□□□□□ -0.28
CHMP3-208ENST00000486404 FERP16591 822 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 CHRNB2P17787 502 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 TFE3P19532 575 aaPredicted RBP13.28□□□□□ -0.28
CHMP3-208ENST00000486404 SDC4P31431 198 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 CXCR3P49682 368 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 NUMBP49757 651 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 ATXN3P54252 364 aaPredicted RBP13.28□□□□□ -0.28
CHMP3-208ENST00000486404 ATP11AP98196 1134 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 SULT2A1Q06520 285 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 ZNF177Q13360 481 aaPredicted RBP13.28□□□□□ -0.28
CHMP3-208ENST00000486404 CDO1Q16878 200 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 CLEC16AQ2KHT3 1053 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 ACBD5Q5T8D3 534 aaPredicted RBP13.28□□□□□ -0.28
CHMP3-208ENST00000486404 APTXQ7Z2E3 356 aaKnown RBP13.28□□□□□ -0.28
CHMP3-208ENST00000486404 EMC1Q8N766 993 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 CEP76Q8TAP6 659 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 GANCQ8TET4 914 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 SNX19Q92543 992 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 PGAP3Q96FM1 320 aaPredicted RBP13.28□□□□□ -0.28
CHMP3-208ENST00000486404 LMLNQ96KR4 655 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 SELENOOQ9BVL4 669 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 GPR174Q9BXC1 333 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 MUC3BQ9H195 1237 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 TMEM9BQ9NQ34 198 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 PRSS16Q9NQE7 514 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 RXFP3Q9NSD7 469 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 ARHGEF38Q9NXL2 777 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 ADAM22Q9P0K1 906 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 EVLQ9UI08 416 aaPredicted RBP13.28□□□□□ -0.28
CHMP3-208ENST00000486404 VPS28Q9UK41 221 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 INTS6Q9UL03 887 aaKnown RBP13.28□□□□□ -0.28
CHMP3-208ENST00000486404 ERVW-1Q9UQF0 538 aa13.28□□□□□ -0.28
CHMP3-208ENST00000486404 PCDH15Q96QU1 1955 aa13.27□□□□□ -0.28
CHMP3-208ENST00000486404 EDDM13A0A1B0GTR0 161 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 LRRC10BA6NIK2 292 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 SIN3BO75182 1162 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 ADCY5O95622 1261 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 RHOCP08134 193 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 GNSP15586 552 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 DESP17661 470 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 CTSOP43234 321 aaPredicted RBP13.27□□□□□ -0.29
CHMP3-208ENST00000486404 MAPK8P45983 427 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 IRAK1P51617 712 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 CDH4P55283 916 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 ZBTB16Q05516 673 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 GFPT1Q06210 699 aaPredicted RBP13.27□□□□□ -0.29
CHMP3-208ENST00000486404 SFSWAPQ12872 951 aaKnown RBP13.27□□□□□ -0.29
CHMP3-208ENST00000486404 DUOXA1Q1HG43 343 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms