RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.26□□□□□ -0.45
PKP4-213ENST00000486254 A0A1W2PQH9 124 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 MTMR11A4FU01 709 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 SNX3O60493 162 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 IL1BP01584 269 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 IGLV3-27P01718 113 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 GALTP07902 379 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 SNRPAP09012 282 aaKnown RBP12.26□□□□□ -0.45
PKP4-213ENST00000486254 ZDHHC11BP0C7U3 371 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 DHRS4L1P0CG22 281 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 KRT4P19013 534 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 CA4P22748 312 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 KPNA1P52294 538 aaPredicted RBP12.26□□□□□ -0.45
PKP4-213ENST00000486254 MLLT6P55198 1093 aaPredicted RBP12.26□□□□□ -0.45
PKP4-213ENST00000486254 EFTUD2Q15029 972 aaKnown RBP eCLIP12.26□□□□□ -0.45
PKP4-213ENST00000486254 TRIP4Q15650 581 aaPredicted RBP12.26□□□□□ -0.45
PKP4-213ENST00000486254 DBN1Q16643 649 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 TIGD7Q6NT04 549 aaPredicted RBP12.26□□□□□ -0.45
PKP4-213ENST00000486254 CAPN12Q6ZSI9 719 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 CTU1Q7Z7A3 348 aaKnown RBP12.26□□□□□ -0.45
PKP4-213ENST00000486254 CHSY1Q86X52 802 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 SCN4BQ8IWT1 228 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 PDCD7Q8N8D1 485 aaKnown RBP12.26□□□□□ -0.45
PKP4-213ENST00000486254 RTL3Q8N8U3 475 aaKnown RBP12.26□□□□□ -0.45
PKP4-213ENST00000486254 ANKRD42Q8N9B4 389 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 ACMSDQ8TDX5 336 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 OVCA2Q8WZ82 227 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 CDKL2Q92772 493 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 APOPT1Q96IL0 206 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 CABS1Q96KC9 395 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 TGS1Q96RS0 853 aaKnown RBP12.26□□□□□ -0.45
PKP4-213ENST00000486254 GPR62Q9BZJ7 368 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 CRISPLD2Q9H0B8 497 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 VPS11Q9H270 941 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 LRRC40Q9H9A6 602 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 NMUR1Q9HB89 426 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 CASS4Q9NQ75 786 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 TLR8Q9NR97 1041 aaKnown RBP12.26□□□□□ -0.45
PKP4-213ENST00000486254 BACE2Q9Y5Z0 518 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 SCN5AQ14524 2016 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 MAGEB16A2A368 324 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 MT-ND3P03897 115 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 VIMP08670 466 aaKnown RBP12.26□□□□□ -0.45
PKP4-213ENST00000486254 OR4Q2P0C623 313 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 HAPLN1P10915 354 aaPredicted RBP12.26□□□□□ -0.45
PKP4-213ENST00000486254 TAC1P20366 129 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 YWHAQP27348 245 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 NEK3P51956 506 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 NDST2P52849 883 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 TNK2Q07912 1038 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 NIPAL4Q0D2K0 466 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 MTFR1Q15390 333 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 SPANXN3Q5MJ09 141 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 NAPEPLDQ6IQ20 393 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 SLC8B1Q6J4K2 584 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 PID1Q7Z2X4 250 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 LINC00523Q86TU6 105 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 ARHGAP12Q8IWW6 846 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 ZNF683Q8IZ20 524 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 UMODL1-AS1Q8N2C9 162 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 ARNTL2Q8WYA1 636 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 CFAP36Q96G28 342 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 FCRL2Q96LA5 508 aaPredicted RBP12.26□□□□□ -0.45
PKP4-213ENST00000486254 IL12RB2Q99665 862 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 GORASP1Q9BQQ3 440 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 TTPALQ9BTX7 342 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 HIPK3Q9H422 1215 aa12.26□□□□□ -0.45
PKP4-213ENST00000486254 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.26□□□□□ -0.45
PKP4-213ENST00000486254 TCP11X1B4DZS4 312 aa12.25□□□□□ -0.45
PKP4-213ENST00000486254 RHOQP17081 205 aa12.25□□□□□ -0.45
PKP4-213ENST00000486254 IBSPP21815 317 aaPredicted RBP12.25□□□□□ -0.45
PKP4-213ENST00000486254 NPY2RP49146 381 aa12.25□□□□□ -0.45
PKP4-213ENST00000486254 PRPSAP1Q14558 356 aa12.25□□□□□ -0.45
PKP4-213ENST00000486254 LACTB2Q53H82 288 aaPredicted RBP12.25□□□□□ -0.45
PKP4-213ENST00000486254 STXBP5Q5T5C0 1151 aa12.25□□□□□ -0.45
PKP4-213ENST00000486254 SNX30Q5VWJ9 437 aa12.25□□□□□ -0.45
PKP4-213ENST00000486254 TMEM135Q86UB9 458 aa12.25□□□□□ -0.45
PKP4-213ENST00000486254 GPR65Q8IYL9 337 aa12.25□□□□□ -0.45
PKP4-213ENST00000486254 ATPAF2Q8N5M1 289 aa12.25□□□□□ -0.45
PKP4-213ENST00000486254 GBP7Q8N8V2 638 aaPredicted RBP12.25□□□□□ -0.45
PKP4-213ENST00000486254 SP7Q8TDD2 431 aaPredicted RBP12.25□□□□□ -0.45
PKP4-213ENST00000486254 SH3TC2Q8TF17 1288 aa12.25□□□□□ -0.45
PKP4-213ENST00000486254 BTN2A3PQ96KV6 586 aa12.25□□□□□ -0.45
PKP4-213ENST00000486254 DEFB118Q96PH6 123 aa12.25□□□□□ -0.45
PKP4-213ENST00000486254 KDM4CQ9H3R0 1056 aa12.25□□□□□ -0.45
PKP4-213ENST00000486254 RABEP2Q9H5N1 569 aa12.25□□□□□ -0.45
PKP4-213ENST00000486254 ACTR5Q9H9F9 607 aaPredicted RBP12.25□□□□□ -0.45
PKP4-213ENST00000486254 PRDM5Q9NQX1 630 aaPredicted RBP12.25□□□□□ -0.45
PKP4-213ENST00000486254 OSER1Q9NX31 292 aa12.25□□□□□ -0.45
PKP4-213ENST00000486254 BFARQ9NZS9 450 aa12.25□□□□□ -0.45
PKP4-213ENST00000486254 MTRRQ9UBK8 725 aa12.25□□□□□ -0.45
PKP4-213ENST00000486254 AAR2Q9Y312 384 aaKnown RBP12.25□□□□□ -0.45
PKP4-213ENST00000486254 STARD13Q9Y3M8 1113 aa12.25□□□□□ -0.45
PKP4-213ENST00000486254 USP15Q9Y4E8 981 aaPredicted RBP12.25□□□□□ -0.45
PKP4-213ENST00000486254 MAD1L1Q9Y6D9 718 aa12.25□□□□□ -0.45
PKP4-213ENST00000486254 SHROOM3Q8TF72 1996 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 COL4A6Q14031 1691 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 FAM237BA0A1B0GVD1 139 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 A0A1W2PPM1 405 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 E9PAM4 449 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms