RNA–Protein interactions for RNA: ENST00000485962.5

SGSM3-213, Transcript of small G protein signaling modulator 3, humanhuman

TSL 5

Gene SGSM3, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-213ENST00000485962 PDE1BQ01064 536 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 DPYSL2Q16555 572 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 Q3C1V9 767 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 ARCQ7LC44 396 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 NET1Q7Z628 596 aaPredicted RBP12.65□□□□□ -0.38
SGSM3-213ENST00000485962 PIWIL2Q8TC59 973 aaKnown RBP12.65□□□□□ -0.38
SGSM3-213ENST00000485962 SLC35F5Q8WV83 523 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 HTR3CQ8WXA8 447 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 CSPG4P5Q96PW8 444 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 LGMNQ99538 433 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 TXNDC16Q9P2K2 825 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 PPP2R3BQ9Y5P8 575 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 SYNJ2BP-COX16A0A087WUM0 186 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 F8W8V4 182 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 HCRTO43612 131 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 SLC25A27O95847 323 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 GOT1P17174 413 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 SLC1A6P48664 564 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 NR2C2P49116 596 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 POLE2P56282 527 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 TBCCQ15814 346 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 ZNF484Q5JVG2 852 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 KYAT3Q6YP21 454 aaKnown RBP12.65□□□□□ -0.38
SGSM3-213ENST00000485962 PYROXD2Q8N2H3 581 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 CCDC185Q8N715 623 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 TFB1MQ8WVM0 346 aaKnown RBP12.65□□□□□ -0.38
SGSM3-213ENST00000485962 USP6NLQ92738 828 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 KCTD15Q96SI1 283 aaPredicted RBP12.65□□□□□ -0.38
SGSM3-213ENST00000485962 CXCL16Q9H2A7 254 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 KRT82Q9NSB4 513 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 NDE1Q9NXR1 346 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 DTLQ9NZJ0 730 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 IL1RAPL1Q9NZN1 696 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 COX16Q9P0S2 106 aa12.65□□□□□ -0.38
SGSM3-213ENST00000485962 KDM1AO60341 852 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 CNMDO75829 334 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 C6orf222P0C671 652 aaPredicted RBP12.64□□□□□ -0.39
SGSM3-213ENST00000485962 ZNF286BP0CG31 522 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 ANPEPP15144 967 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 CNTFP26441 200 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 MGAT1P26572 445 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 SEMA5AQ13591 1074 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 KYAT1Q16773 422 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 GLRA4Q5JXX5 417 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 KBTBD2Q8IY47 623 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 POU5F2Q8N7G0 328 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 PPP4R1Q8TF05 950 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 ABHD8Q96I13 439 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 QKIQ96PU8 341 aaKnown RBP eCLIP12.64□□□□□ -0.39
SGSM3-213ENST00000485962 DPEP3Q9H4B8 488 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 QPCTLQ9NXS2 382 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 GPRC5DQ9NZD1 345 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 MAFFQ9ULX9 164 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 PLA2G4CQ9UP65 541 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 APOBEC2Q9Y235 224 aaKnown RBP12.64□□□□□ -0.39
SGSM3-213ENST00000485962 SDR42E2A6NKP2 422 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 TEX28O15482 410 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 TSPAN1O60635 241 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 GLRA3O75311 464 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 GABBR2O75899 941 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 LGALS2P05162 132 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 CCDC130P13994 396 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 VAV1P15498 845 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 YY1P25490 414 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 ARL4AP40617 200 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 SLC25A3Q00325 362 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 CBLBQ13191 982 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 RSPH3Q86UC2 560 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 FAM131BQ86XD5 332 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 KIAA1958Q8N8K9 716 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 COLGALT1Q8NBJ5 622 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 SHCBP1LQ9BZQ2 653 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 XPNPEP3Q9NQH7 507 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 MOCS1Q9NZB8 636 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 SOX13Q9UN79 622 aa12.64□□□□□ -0.39
SGSM3-213ENST00000485962 USP1O94782 785 aa12.63□□□□□ -0.39
SGSM3-213ENST00000485962 ALDOAP04075 364 aaKnown RBP12.63□□□□□ -0.39
SGSM3-213ENST00000485962 ACTR3P61158 418 aa12.63□□□□□ -0.39
SGSM3-213ENST00000485962 PDE1CQ14123 709 aaPredicted RBP12.63□□□□□ -0.39
SGSM3-213ENST00000485962 HIC1Q14526 733 aa12.63□□□□□ -0.39
SGSM3-213ENST00000485962 SOWAHAQ2M3V2 549 aa12.63□□□□□ -0.39
SGSM3-213ENST00000485962 PKDCCQ504Y2 493 aa12.63□□□□□ -0.39
SGSM3-213ENST00000485962 RNF220Q5VTB9 566 aa12.63□□□□□ -0.39
SGSM3-213ENST00000485962 NCBP2-AS2Q69YL0 99 aa12.63□□□□□ -0.39
SGSM3-213ENST00000485962 IZUMO2Q6UXV1 221 aa12.63□□□□□ -0.39
SGSM3-213ENST00000485962 ESX1Q8N693 406 aa12.63□□□□□ -0.39
SGSM3-213ENST00000485962 CCNYQ8ND76 341 aa12.63□□□□□ -0.39
SGSM3-213ENST00000485962 C1orf74Q96LT6 269 aa12.63□□□□□ -0.39
SGSM3-213ENST00000485962 ZNF638Q14966 1978 aaKnown RBP12.63□□□□□ -0.39
SGSM3-213ENST00000485962 A0A0A0MRY4 1105 aa12.63□□□□□ -0.39
SGSM3-213ENST00000485962 NPTXRO95502 500 aa12.63□□□□□ -0.39
SGSM3-213ENST00000485962 UBTFL6P0CB48 400 aaPredicted RBP12.63□□□□□ -0.39
SGSM3-213ENST00000485962 PCNAP12004 261 aa12.63□□□□□ -0.39
SGSM3-213ENST00000485962 GLULP15104 373 aa12.63□□□□□ -0.39
SGSM3-213ENST00000485962 EPHB1P54762 984 aa12.63□□□□□ -0.39
SGSM3-213ENST00000485962 CTAG1AP78358 180 aa12.63□□□□□ -0.39
SGSM3-213ENST00000485962 MBLAC2Q68D91 279 aa12.63□□□□□ -0.39
SGSM3-213ENST00000485962 CES3Q6UWW8 571 aa12.63□□□□□ -0.39
SGSM3-213ENST00000485962 TIFABQ6ZNK6 161 aa12.63□□□□□ -0.39
SGSM3-213ENST00000485962 ZDHHC17Q8IUH5 632 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms