RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 STK26Q9P289 416 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 PARP4Q9UKK3 1724 aaKnown RBP5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 ATP10DQ9P241 1426 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 SBNO1A3KN83 1393 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 NUP155O75694 1391 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 PAPPAQ13219 1627 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 CCDC187A0A096LP49 1063 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 PRYO14603 147 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 CAND2O75155 1236 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 NBPF7P0C2Y1 421 aaPredicted RBP5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 RPS6KB1P23443 525 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 EEF1GP26641 437 aaKnown RBP5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 NDUFS1P28331 727 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 HOXD12P35452 270 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 IDUAP35475 653 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 CPA2P48052 419 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 GAB1Q13480 694 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 TWIST1Q15672 202 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 ZNF260Q3ZCT1 412 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 EARS2Q5JPH6 523 aaKnown RBP5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 ACSM6Q6P461 480 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 FBXO38Q6PIJ6 1188 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 RBM44Q6ZP01 1051 aaKnown RBP5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 PIK3AP1Q6ZUJ8 805 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 WIPF2Q8TF74 440 aaPredicted RBP5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 PIGKQ92643 395 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 EIF3CQ99613 913 aaKnown RBP5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 CDCP1Q9H5V8 836 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 HEY2Q9UBP5 337 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 LMO7Q8WWI1 1683 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 TUBGCP6Q96RT7 1819 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 WNK3Q9BYP7 1800 aa5.3□□□□□ -1.56
SMARCC1-207ENST00000485833 KIAA0232Q92628 1395 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 ADGRF5Q8IZF2 1346 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 PODXLO00592 558 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 HOXA7P31268 230 aaPredicted RBP5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 SLC12A2P55011 1212 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 MAPK7Q13164 816 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 MTA1Q13330 715 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 ELF2Q15723 593 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 P3H1Q32P28 736 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 IZUMO3Q5VZ72 239 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 ZNF793Q6ZN11 406 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 IRF2BP2Q7Z5L9 587 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 UEVLDQ8IX04 471 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 ARFGAP1Q8N6T3 406 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 BCAS4Q8TDM0 211 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 GLMPQ8WWB7 406 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 ZNF566Q969W8 418 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 TRMT61AQ96FX7 289 aaKnown RBP5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 ZFYVE19Q96K21 471 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 TRMOQ9BU70 441 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 GATA5Q9BWX5 397 aaPredicted RBP5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 FOXP1Q9H334 677 aaPredicted RBP5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 NECTIN3Q9NQS3 549 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 CA14Q9ULX7 337 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 SSH2Q76I76 1423 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 ARHGEF10O15013 1369 aa5.29□□□□□ -1.56
SMARCC1-207ENST00000485833 SLC22A23A1A5C7 686 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 CTIFO43310 598 aaKnown RBP5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 DHHO43323 396 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 KRT18P05783 430 aaKnown RBP5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 SRGAP2BP0DMP2 458 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 ALADP13716 330 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 ST6GAL1P15907 406 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 ITGB6P18564 788 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 SLC8A1P32418 973 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 AK2P54819 239 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 KYAT3Q6YP21 454 aaKnown RBP5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 FAM57BQ71RH2 274 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 SKAP1Q86WV1 359 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 RFX6Q8HWS3 928 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 RASGRP3Q8IV61 690 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 PARD3BQ8TEW8 1205 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 ASB12Q8WXK4 309 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 PMM1Q92871 262 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 CELF1Q92879 486 aaKnown RBP5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 GJA10Q969M2 543 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 ZNF845Q96IR2 970 aaPredicted RBP5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 VCPIP1Q96JH7 1222 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 SCNM1Q9BWG6 230 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 CERS4Q9HA82 394 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 PHTF1Q9UMS5 762 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 DTNAQ9Y4J8 743 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 CEP83Q9Y592 693 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 CACNA1IQ9P0X4 2223 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 COL24A1Q17RW2 1714 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 TOPAZ1Q8N9V7 1692 aa5.28□□□□□ -1.56
SMARCC1-207ENST00000485833 GXYLT2A0PJZ3 443 aa5.27□□□□□ -1.57
SMARCC1-207ENST00000485833 MYMKA6NI61 221 aa5.27□□□□□ -1.57
SMARCC1-207ENST00000485833 J3KTA2 159 aa5.27□□□□□ -1.57
SMARCC1-207ENST00000485833 M0QZQ0 153 aa5.27□□□□□ -1.57
SMARCC1-207ENST00000485833 HNRNPDLO14979 420 aaKnown RBP5.27□□□□□ -1.57
SMARCC1-207ENST00000485833 KCNAB3O43448 404 aa5.27□□□□□ -1.57
SMARCC1-207ENST00000485833 NTN1O95631 604 aa5.27□□□□□ -1.57
SMARCC1-207ENST00000485833 MYL1P05976 194 aa5.27□□□□□ -1.57
SMARCC1-207ENST00000485833 ZNF84P51523 738 aa5.27□□□□□ -1.57
SMARCC1-207ENST00000485833 POLGP54098 1239 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms