RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 SEMG2Q02383 582 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 PAK1Q13153 545 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 SUZ12Q15022 739 aaKnown RBP10.98□□□□□ -0.65
HMGN1-215ENST00000485550 STILQ15468 1287 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 SMAD1Q15797 465 aaKnown RBP10.98□□□□□ -0.65
HMGN1-215ENST00000485550 CAMK4Q16566 473 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 PTPRNQ16849 979 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 FAM133BQ5BKY9 247 aaKnown RBP10.98□□□□□ -0.65
HMGN1-215ENST00000485550 PIK3R6Q5UE93 754 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 MBLAC2Q68D91 279 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 MSANTD2Q6P1R3 559 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 DENND1BQ6P3S1 775 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 ADIPOR2Q86V24 386 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 UNC45BQ8IWX7 931 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 IRGQQ8WZA9 623 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 FAM149B1Q96BN6 582 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 MYEOVQ96EZ4 313 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 HSFY1Q96LI6 401 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 CRACR2AQ9BSW2 395 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 ACP6Q9NPH0 428 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 STOML2Q9UJZ1 356 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 NAALADL1Q9UQQ1 740 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 NFE2L3Q9Y4A8 694 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 PCDHGB2Q9Y5G2 931 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.98□□□□□ -0.65
HMGN1-215ENST00000485550 SPTA1P02549 2419 aa10.98□□□□□ -0.65
HMGN1-215ENST00000485550 COL5A1P20908 1838 aaPredicted RBP10.98□□□□□ -0.65
HMGN1-215ENST00000485550 ATMQ13315 3056 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 LETM1O95202 739 aaPredicted RBP10.97□□□□□ -0.65
HMGN1-215ENST00000485550 LATS1O95835 1130 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 GNA14O95837 355 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 POLR2EP19388 210 aaKnown RBP10.97□□□□□ -0.65
HMGN1-215ENST00000485550 OXTRP30559 389 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 GPD2P43304 727 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 NUMBP49757 651 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 ZNF445P59923 1031 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 IL9RQ01113 521 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 APBA1Q02410 837 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 GCNT1Q02742 428 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 KIF19Q2TAC6 998 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 SYPL2Q5VXT5 272 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 NUGGCQ68CJ6 796 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 NADSYN1Q6IA69 706 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 GJB7Q6PEY0 223 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 LAYNQ6UX15 382 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 MMS22LQ6ZRQ5 1243 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 MFN1Q8IWA4 741 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 CARNMT1Q8N4J0 409 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 CADM4Q8NFZ8 388 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 OR2T3Q8NH03 318 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 C1orf216Q8TAB5 229 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 DQX1Q8TE96 717 aaKnown RBP10.97□□□□□ -0.65
HMGN1-215ENST00000485550 WFIKKN2Q8TEU8 576 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 NUP58Q9BVL2 599 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 LHX5Q9H2C1 402 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 C6orf106Q9H6K1 298 aaPredicted RBP10.97□□□□□ -0.65
HMGN1-215ENST00000485550 PRSS16Q9NQE7 514 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 SNX11Q9Y5W9 270 aa10.97□□□□□ -0.65
HMGN1-215ENST00000485550 PYCARD-AS1I3L0S3 204 aa10.96□□□□□ -0.65
HMGN1-215ENST00000485550 CAPN9O14815 690 aa10.96□□□□□ -0.65
HMGN1-215ENST00000485550 THAP12O43422 761 aa10.96□□□□□ -0.65
HMGN1-215ENST00000485550 FBXO21O94952 628 aa10.96□□□□□ -0.65
HMGN1-215ENST00000485550 IGLV3-27P01718 113 aa10.96□□□□□ -0.65
HMGN1-215ENST00000485550 ATP5BP06576 529 aaKnown RBP10.96□□□□□ -0.65
HMGN1-215ENST00000485550 DLDP09622 509 aaKnown RBP10.96□□□□□ -0.65
HMGN1-215ENST00000485550 ACSL1P33121 698 aa10.96□□□□□ -0.65
HMGN1-215ENST00000485550 USP8P40818 1118 aa10.96□□□□□ -0.65
HMGN1-215ENST00000485550 GRK6P43250 576 aa10.96□□□□□ -0.65
HMGN1-215ENST00000485550 RPS24P62847 133 aaKnown RBP10.96□□□□□ -0.65
HMGN1-215ENST00000485550 CFHR1Q03591 330 aa10.96□□□□□ -0.65
HMGN1-215ENST00000485550 CAMK2GQ13555 558 aaPredicted RBP10.96□□□□□ -0.65
HMGN1-215ENST00000485550 E2F5Q15329 346 aa10.96□□□□□ -0.65
HMGN1-215ENST00000485550 ARHGAP44Q17R89 818 aa10.96□□□□□ -0.65
HMGN1-215ENST00000485550 PCSK4Q6UW60 755 aa10.96□□□□□ -0.65
HMGN1-215ENST00000485550 KIAA0907Q7Z7F0 614 aaPredicted RBP10.96□□□□□ -0.65
HMGN1-215ENST00000485550 AHI1Q8N157 1196 aa10.96□□□□□ -0.65
HMGN1-215ENST00000485550 CFAP52Q8N1V2 620 aa10.96□□□□□ -0.65
HMGN1-215ENST00000485550 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.96□□□□□ -0.65
HMGN1-215ENST00000485550 NXPE2Q96DL1 559 aa10.96□□□□□ -0.65
HMGN1-215ENST00000485550 FCRL2Q96LA5 508 aaPredicted RBP10.96□□□□□ -0.65
HMGN1-215ENST00000485550 PRICKLE1Q96MT3 831 aaPredicted RBP10.96□□□□□ -0.65
HMGN1-215ENST00000485550 NUCKS1Q9H1E3 243 aaKnown RBP10.96□□□□□ -0.65
HMGN1-215ENST00000485550 TMEM245Q9H330 911 aa10.96□□□□□ -0.65
HMGN1-215ENST00000485550 TJP2Q9UDY2 1190 aa10.96□□□□□ -0.65
HMGN1-215ENST00000485550 CYTH4Q9UIA0 394 aa10.96□□□□□ -0.65
HMGN1-215ENST00000485550 XPO7Q9UIA9 1087 aaKnown RBP10.96□□□□□ -0.65
HMGN1-215ENST00000485550 AK5Q9Y6K8 562 aa10.96□□□□□ -0.65
HMGN1-215ENST00000485550 E5RJQ4 531 aa10.95□□□□□ -0.66
HMGN1-215ENST00000485550 E9PAM4 449 aa10.95□□□□□ -0.66
HMGN1-215ENST00000485550 CBX4O00257 560 aa10.95□□□□□ -0.66
HMGN1-215ENST00000485550 PAPSS1O43252 624 aaPredicted RBP10.95□□□□□ -0.66
HMGN1-215ENST00000485550 DNTTP04053 509 aa10.95□□□□□ -0.66
HMGN1-215ENST00000485550 JUPP14923 745 aa10.95□□□□□ -0.66
HMGN1-215ENST00000485550 SLC9A1P19634 815 aa10.95□□□□□ -0.66
HMGN1-215ENST00000485550 GNA15P30679 374 aa10.95□□□□□ -0.66
HMGN1-215ENST00000485550 CCT8P50990 548 aa10.95□□□□□ -0.66
HMGN1-215ENST00000485550 AFF3P51826 1226 aaKnown RBP10.95□□□□□ -0.66
HMGN1-215ENST00000485550 MARSP56192 900 aaKnown RBP10.95□□□□□ -0.66
HMGN1-215ENST00000485550 RPS14P62263 151 aaKnown RBP10.95□□□□□ -0.66
HMGN1-215ENST00000485550 PITX1P78337 314 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms