RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424	ZNF606	Q8WXB4	792 aa		13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	FCRL2	Q96LA5	508 aa	Predicted RBP	13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	KREMEN1	Q96MU8	473 aa		13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	NOX5	Q96PH1	765 aa		13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	CRACR2A	Q9BSW2	395 aa		13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	C6orf106	Q9H6K1	298 aa	Predicted RBP	13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	PRSS16	Q9NQE7	514 aa		13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	TOR4A	Q9NXH8	423 aa		13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	SCML1	Q9UN30	329 aa		13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	HELZ2	Q9BYK8	2649 aa	Known RBP	13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	PTPRQ	Q9UMZ3	2332 aa		13.72	□□□□□ -0.21
UBA3-210	ENST00000485424		A0A1B0GVT2	93 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	FAM47DP	A6NHR8	397 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424		E5RJQ4	531 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424		F5H5T6	163 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	FLRT2	O43155	660 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	FSBP	O95073	299 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	LUC7L3	O95232	432 aa	Known RBP	13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	ABCB4	P21439	1286 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	ACSL1	P33121	698 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	CSK	P41240	450 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	RPS14	P62263	151 aa	Known RBP	13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	RPS24	P62847	133 aa	Known RBP	13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	YWHAZ	P63104	245 aa	Known RBP	13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	SUZ12	Q15022	739 aa	Known RBP	13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	CAMK4	Q16566	473 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	MEA1	Q16626	185 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	PTPRN	Q16849	979 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	MS4A13	Q5J8X5	152 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	RAP1GAP2	Q684P5	730 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	NADSYN1	Q6IA69	706 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	TRIM65	Q6PJ69	517 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	CFAP52	Q8N1V2	620 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	MDM1	Q8TC05	714 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	BTN2A3P	Q96KV6	586 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	OMD	Q99983	421 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	NUCKS1	Q9H1E3	243 aa	Known RBP	13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	THAP9	Q9H5L6	903 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	FAM204A	Q9H8W3	233 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	SGK2	Q9HBY8	427 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	RWDD2A	Q9UIY3	292 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	CNTN6	Q9UQ52	1028 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	BTBD3	Q9Y2F9	522 aa		13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.71	□□□□□ -0.21
UBA3-210	ENST00000485424	ASXL3	Q9C0F0	2248 aa		13.71	□□□□□ -0.22
UBA3-210	ENST00000485424	TRPM6	Q9BX84	2022 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	DKK1	O94907	266 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	TRUB2	O95900	331 aa	Known RBP	13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	SRPRA	P08240	638 aa	Known RBP	13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	SLC2A3	P11169	496 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	TACR2	P21452	398 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	CSNK1E	P49674	416 aa	Known RBP	13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	UBE2H	P62256	183 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	CDK17	Q00537	523 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	PTK2	Q05397	1052 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	ACAP1	Q15027	740 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	EXOC3L4	Q17RC7	722 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	DCAF6	Q58WW2	860 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	PITRM1	Q5JRX3	1037 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	SYPL2	Q5VXT5	272 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	DBX2	Q6ZNG2	339 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	BEND5	Q7L4P6	421 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	FAM114A1	Q8IWE2	563 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	DHX40	Q8IX18	779 aa	Known RBP	13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	SKA1	Q96BD8	255 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	PPP1R9B	Q96SB3	815 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	PDCL3	Q9H2J4	239 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	CCDC86	Q9H6F5	360 aa	Known RBP	13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	SYNC	Q9H7C4	482 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	COX16	Q9P0S2	106 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	KIAA1468	Q9P260	1216 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	APEX2	Q9UBZ4	518 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	ERVW-1	Q9UQF0	538 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	PCDHGB2	Q9Y5G2	931 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	SETX	Q7Z333	2677 aa	Known RBP	13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	ATM	Q13315	3056 aa		13.7	□□□□□ -0.22
UBA3-210	ENST00000485424	EDDM13	A0A1B0GTR0	161 aa		13.69	□□□□□ -0.22
UBA3-210	ENST00000485424	PAPSS1	O43252	624 aa	Predicted RBP	13.69	□□□□□ -0.22
UBA3-210	ENST00000485424	FYN	P06241	537 aa		13.69	□□□□□ -0.22
UBA3-210	ENST00000485424	ATXN1L	P0C7T5	689 aa	Known RBP	13.69	□□□□□ -0.22
UBA3-210	ENST00000485424	SLC9A1	P19634	815 aa		13.69	□□□□□ -0.22
UBA3-210	ENST00000485424	KRT9	P35527	623 aa		13.69	□□□□□ -0.22
UBA3-210	ENST00000485424	GRIA4	P48058	902 aa		13.69	□□□□□ -0.22
UBA3-210	ENST00000485424	RPL34	P49207	117 aa	Known RBP	13.69	□□□□□ -0.22
UBA3-210	ENST00000485424	C21orf59	P57076	290 aa		13.69	□□□□□ -0.22
UBA3-210	ENST00000485424	ECT2L	Q008S8	904 aa		13.69	□□□□□ -0.22
UBA3-210	ENST00000485424	PDCL	Q13371	301 aa		13.69	□□□□□ -0.22
UBA3-210	ENST00000485424	SLC12A1	Q13621	1099 aa		13.69	□□□□□ -0.22
UBA3-210	ENST00000485424	KIF19	Q2TAC6	998 aa		13.69	□□□□□ -0.22
UBA3-210	ENST00000485424	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.69	□□□□□ -0.22
UBA3-210	ENST00000485424	EFHC1	Q5JVL4	640 aa		13.69	□□□□□ -0.22
UBA3-210	ENST00000485424	RABGAP1L	Q5R372	815 aa		13.69	□□□□□ -0.22
UBA3-210	ENST00000485424	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.69	□□□□□ -0.22
UBA3-210	ENST00000485424	GJB7	Q6PEY0	223 aa		13.69	□□□□□ -0.22
UBA3-210	ENST00000485424	C19orf48	Q6RUI8	117 aa		13.69	□□□□□ -0.22

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