RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 TJAP1Q5JTD0 557 aa9.48□□□□□ -0.89
USP16-206ENST00000485067 RNASEH2BQ5TBB1 312 aaKnown RBP9.48□□□□□ -0.89
USP16-206ENST00000485067 BBS12Q6ZW61 710 aa9.48□□□□□ -0.89
USP16-206ENST00000485067 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.48□□□□□ -0.89
USP16-206ENST00000485067 C1orf127Q8N9H9 656 aa9.48□□□□□ -0.89
USP16-206ENST00000485067 HLA-CQ95604 372 aa9.48□□□□□ -0.89
USP16-206ENST00000485067 C9orf72Q96LT7 481 aa9.48□□□□□ -0.89
USP16-206ENST00000485067 SAYSD1Q9NPB0 183 aa9.48□□□□□ -0.89
USP16-206ENST00000485067 DNAJC17Q9NVM6 304 aaKnown RBP9.48□□□□□ -0.89
USP16-206ENST00000485067 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.48□□□□□ -0.89
USP16-206ENST00000485067 MALT1Q9UDY8 824 aa9.48□□□□□ -0.89
USP16-206ENST00000485067 FETUBQ9UGM5 382 aa9.48□□□□□ -0.89
USP16-206ENST00000485067 SIX4Q9UIU6 781 aa9.48□□□□□ -0.89
USP16-206ENST00000485067 VANGL2Q9ULK5 521 aa9.48□□□□□ -0.89
USP16-206ENST00000485067 POLIQ9UNA4 740 aa9.48□□□□□ -0.89
USP16-206ENST00000485067 GTF2A1LQ9UNN4 478 aa9.48□□□□□ -0.89
USP16-206ENST00000485067 CHMP2BQ9UQN3 213 aa9.48□□□□□ -0.89
USP16-206ENST00000485067 CEP350Q5VT06 3117 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 EXOC1LA0A1B0GW35 172 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 BTBD19C9JJ37 291 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 STMND1H3BQB6 276 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 SGK1O00141 431 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 ADCY6O43306 1168 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 HNRNPRO43390 633 aaKnown RBP9.47□□□□□ -0.89
USP16-206ENST00000485067 SNX3O60493 162 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 CILPO75339 1184 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 LRCH4O75427 683 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 POP4O95707 220 aaKnown RBP9.47□□□□□ -0.89
USP16-206ENST00000485067 STAU1O95793 577 aaKnown RBP9.47□□□□□ -0.89
USP16-206ENST00000485067 ITGBL1O95965 494 aaPredicted RBP9.47□□□□□ -0.89
USP16-206ENST00000485067 STAG3L1P0CL83 205 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 TRIM23P36406 574 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 ADCYAP1R1P41586 468 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 SCTRP47872 440 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 IFNAR2P48551 515 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 MAPKAPK2P49137 400 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 OLR1P78380 273 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 PLCB3Q01970 1234 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 PTPN11Q06124 597 aaPredicted RBP9.47□□□□□ -0.89
USP16-206ENST00000485067 ARHGAP1Q07960 439 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 SMAD4Q13485 552 aaKnown RBP9.47□□□□□ -0.89
USP16-206ENST00000485067 WSCD2Q2TBF2 565 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 Q3ZCU0 254 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 TMEM214Q6NUQ4 689 aaKnown RBP9.47□□□□□ -0.89
USP16-206ENST00000485067 TAPT1Q6NXT6 567 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 XYLT1Q86Y38 959 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 SLC4A11Q8NBS3 891 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 GRAMD1AQ96CP6 724 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 THAP11Q96EK4 314 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 SLC10A4Q96EP9 437 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 MCRS1Q96EZ8 462 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 TMEM176AQ96HP8 235 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 MAGEB18Q96M61 343 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 ELAC2Q9BQ52 826 aaKnown RBP9.47□□□□□ -0.89
USP16-206ENST00000485067 HAUS8Q9BT25 410 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 SHCBP1LQ9BZQ2 653 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 VPS37BQ9H9H4 285 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 THAP1Q9NVV9 213 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 NOP53Q9NZM5 478 aaKnown RBP9.47□□□□□ -0.89
USP16-206ENST00000485067 HACD3Q9P035 362 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 SLC24A2Q9UI40 661 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 USP15Q9Y4E8 981 aaPredicted RBP9.47□□□□□ -0.89
USP16-206ENST00000485067 PCDHGB7Q9Y5F8 929 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 SNX9Q9Y5X1 595 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 DOCK3Q8IZD9 2030 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 GLTPD2A6NH11 291 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 SNTNA6NMZ2 147 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 FAM47E-STBD1D6RA91 191 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 GOLGA8SH3BPF8 625 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 GPR25O00155 361 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 PDHXO00330 501 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 DNM1LO00429 736 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 SUN1O94901 812 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 OAS1P00973 400 aaKnown RBP9.47□□□□□ -0.89
USP16-206ENST00000485067 C6orf222P0C671 652 aaPredicted RBP9.47□□□□□ -0.89
USP16-206ENST00000485067 PTPN2P17706 415 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 KDELR1P24390 212 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 ADORA2AP29274 412 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 STX2P32856 288 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 PCK1P35558 622 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 IL9RQ01113 521 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 RALGDSQ12967 914 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 ORC1Q13415 861 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 MRPL10Q7Z7H8 261 aaKnown RBP9.47□□□□□ -0.89
USP16-206ENST00000485067 PPIL6Q8IXY8 311 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 OR7G1Q8NGA0 311 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 ATL1Q8WXF7 558 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 BRI3BPQ8WY22 251 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 STAMBPL1Q96FJ0 436 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 PWWP2AQ96N64 755 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 VPS11Q9H270 941 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 CXCL16Q9H2A7 254 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 TRPC7Q9HCX4 862 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 ASNSD1Q9NWL6 643 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 ARHGEF38Q9NXL2 777 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 NDUFA13Q9P0J0 144 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 GMIPQ9P107 970 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 CTNNAL1Q9UBT7 734 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 ITGA11Q9UKX5 1188 aa9.47□□□□□ -0.89
USP16-206ENST00000485067 CITO14578 2027 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms