RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 VDRP11473 427 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 GTF2A2P52657 109 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 IRF9Q00978 393 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 DLG2Q15700 870 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 TMEM126BQ8IUX1 230 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 TMEM102Q8N9M5 508 aaPredicted RBP20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 RIN3Q8TB24 985 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 ABTB1Q969K4 478 aaPredicted RBP20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 ZNF512Q96ME7 567 aaPredicted RBP20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 SERPINI1Q99574 410 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 LIN28AQ9H9Z2 209 aaKnown RBP20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 SYBUQ9NX95 663 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 TSPAN16Q9UKR8 245 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 RNF11Q9Y3C5 154 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 HES2Q9Y543 173 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 ARHGAP10A1A4S6 786 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 RNASEH2AO75792 299 aaKnown RBP20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 GJB1P08034 283 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 MPSTP25325 297 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 EPHA3P29320 983 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 ABCG1P45844 678 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 DCTN2Q13561 401 aaKnown RBP20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 LSM12Q3MHD2 195 aaKnown RBP20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 PMF1Q6P1K2 205 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 ZFP1Q6P2D0 407 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 MPZL3Q6UWV2 235 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 OLFML1Q6UWY5 402 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 C16orf89Q6UX73 402 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 SCUBE3Q8IX30 993 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 LGMNQ99538 433 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 CEP41Q9BYV8 373 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 DTLQ9NZJ0 730 aa20.21■□□□□ 0.83
RPUSD3-216ENST00000484134 GABBR2O75899 941 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 PTPN1P18031 435 aaKnown RBP20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 PGAM1P18669 254 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 OLIG2Q13516 323 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 TMEM132BQ14DG7 1078 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 TMEM198Q66K66 360 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 HEATR6Q6AI08 1181 aaKnown RBP20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 LRRC8BQ6P9F7 803 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 ALDH16A1Q8IZ83 802 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 NUP93Q8N1F7 819 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 FAM156AQ8NDB6 213 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 CATSPER1Q8NEC5 780 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 DIS3LQ8TF46 1054 aaKnown RBP20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 DDI1Q8WTU0 396 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 CNDP1Q96KN2 507 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 FCRL3Q96P31 734 aaPredicted RBP20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 DHX35Q9H5Z1 703 aaKnown RBP20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 HESX1Q9UBX0 185 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 C7orf72A4D263 438 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 NOP56O00567 594 aaKnown RBP20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 DPYSL4O14531 572 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 MDM4O15151 490 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 ZNF26P17031 533 aaPredicted RBP20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 NDST1P52848 882 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 PPIDQ08752 370 aaKnown RBP20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 ITGA7Q13683 1181 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 PPP2R5DQ14738 602 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 CCDC153Q494R4 210 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 LZICQ8WZA0 190 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 TBCBQ99426 244 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 GATA5Q9BWX5 397 aaPredicted RBP20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 B3GNT5Q9BYG0 378 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 CAB39LQ9H9S4 337 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 NRBP2Q9NSY0 501 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 MORF4L1Q9UBU8 362 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 VPS28Q9UK41 221 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 PARP14Q460N5 1801 aa20.2■□□□□ 0.82
RPUSD3-216ENST00000484134 MLNP12872 115 aa20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 ENO3P13929 434 aaPredicted RBP20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 SDC4P31431 198 aa20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 TMED1Q13445 227 aa20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 ATF7IP2Q5U623 682 aa20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 COLGALT1Q8NBJ5 622 aa20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 CNKSR2Q8WXI2 1034 aa20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 LACTBL1A8MY62 500 aa20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 MATN2O00339 956 aa20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 WNT10BO00744 389 aa20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 ACOT8O14734 319 aa20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 P4HA1P13674 534 aa20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 CCDC130P13994 396 aa20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 NELFEP18615 380 aaKnown RBP20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 GP5P40197 560 aa20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 MAGEA12P43365 314 aa20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 SERPINB8P50452 374 aa20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 CYTH1Q15438 398 aa20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 KLHL35Q6PF15 583 aa20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 LCLAT1Q6UWP7 414 aa20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 HTR3CQ8WXA8 447 aa20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 HSPBAP1Q96EW2 488 aa20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 SLC4A5Q9BY07 1137 aa20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 INO80BQ9C086 356 aaPredicted RBP20.19■□□□□ 0.82
RPUSD3-216ENST00000484134 A0A0A0MRY4 1105 aa20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 BCAS2O75934 225 aaPredicted RBP20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 STAT5BP51692 787 aa20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 CLCN2P51788 898 aa20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 SULT2A1Q06520 285 aa20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 NRF1Q16656 503 aa20.18■□□□□ 0.82
RPUSD3-216ENST00000484134 JADE1Q6IE81 842 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms