RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 SERGEFQ9UGK8 458 aa12.48□□□□□ -0.41
HDLBP-239ENST00000483086 TMEM59LQ9UK28 342 aa12.48□□□□□ -0.41
HDLBP-239ENST00000483086 OR51B4Q9Y5P0 310 aa12.48□□□□□ -0.41
HDLBP-239ENST00000483086 USP24Q9UPU5 2620 aa12.48□□□□□ -0.41
HDLBP-239ENST00000483086 FREM2Q5SZK8 3169 aa12.48□□□□□ -0.41
HDLBP-239ENST00000483086 LAMA5O15230 3695 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 LRRC10BA6NIK2 292 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 LGALS16A8MUM7 142 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 M0QYT0 321 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 SYNCRIPO60506 623 aaKnown RBP12.47□□□□□ -0.41
HDLBP-239ENST00000483086 SIN3BO75182 1162 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 PAGE1O75459 146 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 ADRB1P08588 477 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 POLR2EP19388 210 aaKnown RBP12.47□□□□□ -0.41
HDLBP-239ENST00000483086 SDHBP21912 280 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 METAP1P53582 386 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 BNC1Q01954 994 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 AUHQ13825 339 aaKnown RBP12.47□□□□□ -0.41
HDLBP-239ENST00000483086 BYSLQ13895 437 aaKnown RBP12.47□□□□□ -0.41
HDLBP-239ENST00000483086 ALFQ53S48 1182 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 C9orf64Q5T6V5 341 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 FAM102AQ5T9C2 384 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-239ENST00000483086 SH3PXD2AQ5TCZ1 1133 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 SASS6Q6UVJ0 657 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 DHX40Q8IX18 779 aaKnown RBP12.47□□□□□ -0.41
HDLBP-239ENST00000483086 AOPEPQ8N6M6 819 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 EMC1Q8N766 993 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 ATP6V0D2Q8N8Y2 350 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 TMEM35BQ8NCS4 154 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 C1orf216Q8TAB5 229 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 JOSD2Q8TAC2 188 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 SLC30A5Q8TAD4 765 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 PRCCQ92733 491 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-239ENST00000483086 CFAP57Q96MR6 1250 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 FUCA2Q9BTY2 467 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 C6orf106Q9H6K1 298 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-239ENST00000483086 ARHGEF38Q9NXL2 777 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 VANGL2Q9ULK5 521 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 ERVW-1Q9UQF0 538 aa12.47□□□□□ -0.41
HDLBP-239ENST00000483086 CELSR3Q9NYQ7 3312 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 C10orf142B7Z368 130 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 F5H5T6 163 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 H0Y626 953 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 GOLGA8SH3BPF8 625 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 RNF103O00237 685 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 FOXD2O60548 495 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-239ENST00000483086 KCNK5O95279 499 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 UNGP13051 313 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-239ENST00000483086 PDGFRAP16234 1089 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 CCR1P32246 355 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 SOX5P35711 763 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 MAPK8P45983 427 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 CXCR3P49682 368 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 SULT1E1P49888 294 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 BPIFB4P59827 614 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 CDR2Q01850 454 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 CDH18Q13634 790 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 HNRNPA1L2Q32P51 320 aaKnown RBP12.46□□□□□ -0.41
HDLBP-239ENST00000483086 C5orf22Q49AR2 442 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 ANO6Q4KMQ2 910 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 N4BP2L1Q5TBK1 243 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-239ENST00000483086 ERICH1Q86X53 443 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 DNASE2BQ8WZ79 361 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 PTPRN2Q92932 1015 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 C18orf8Q96DM3 657 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 PGAP3Q96FM1 320 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-239ENST00000483086 FAM129BQ96TA1 746 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 ORAI3Q9BRQ5 295 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 TRIM62Q9BVG3 475 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 TKTL2Q9H0I9 626 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 RSPH9Q9H1X1 276 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-239ENST00000483086 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.46□□□□□ -0.41
HDLBP-239ENST00000483086 ZNF212Q9UDV6 495 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 PLA2G4CQ9UP65 541 aa12.46□□□□□ -0.41
HDLBP-239ENST00000483086 CFAP47Q6ZTR5 3102 aa12.45□□□□□ -0.42
HDLBP-239ENST00000483086 ITIH6Q6UXX5 1313 aa12.45□□□□□ -0.42
HDLBP-239ENST00000483086 GJB3O75712 270 aa12.45□□□□□ -0.42
HDLBP-239ENST00000483086 LSM8O95777 96 aaKnown RBP12.45□□□□□ -0.42
HDLBP-239ENST00000483086 TOP3BO95985 862 aaKnown RBP12.45□□□□□ -0.42
HDLBP-239ENST00000483086 CFIP05156 583 aa12.45□□□□□ -0.42
HDLBP-239ENST00000483086 SERPINF2P08697 491 aa12.45□□□□□ -0.42
HDLBP-239ENST00000483086 ABCB4P21439 1286 aa12.45□□□□□ -0.42
HDLBP-239ENST00000483086 KCNA4P22459 653 aa12.45□□□□□ -0.42
HDLBP-239ENST00000483086 MMP8P22894 467 aa12.45□□□□□ -0.42
HDLBP-239ENST00000483086 ARID5AQ03989 594 aa12.45□□□□□ -0.42
HDLBP-239ENST00000483086 DUOXA1Q1HG43 343 aa12.45□□□□□ -0.42
HDLBP-239ENST00000483086 C15orf59Q2T9L4 293 aaPredicted RBP12.45□□□□□ -0.42
HDLBP-239ENST00000483086 DCAF12L1Q5VU92 463 aa12.45□□□□□ -0.42
HDLBP-239ENST00000483086 E4F1Q66K89 784 aaPredicted RBP12.45□□□□□ -0.42
HDLBP-239ENST00000483086 IL31Q6EBC2 164 aa12.45□□□□□ -0.42
HDLBP-239ENST00000483086 PSAPL1Q6NUJ1 521 aa12.45□□□□□ -0.42
HDLBP-239ENST00000483086 ZDHHC17Q8IUH5 632 aa12.45□□□□□ -0.42
HDLBP-239ENST00000483086 FRS2Q8WU20 508 aa12.45□□□□□ -0.42
HDLBP-239ENST00000483086 RNF34Q969K3 372 aa12.45□□□□□ -0.42
HDLBP-239ENST00000483086 NOX5Q96PH1 765 aa12.45□□□□□ -0.42
HDLBP-239ENST00000483086 ERGIC2Q96RQ1 377 aa12.45□□□□□ -0.42
HDLBP-239ENST00000483086 PSMB7Q99436 277 aa12.45□□□□□ -0.42
HDLBP-239ENST00000483086 DDX50Q9BQ39 737 aaKnown RBP12.45□□□□□ -0.42
HDLBP-239ENST00000483086 C11orf70Q9BRQ4 267 aa12.45□□□□□ -0.42
HDLBP-239ENST00000483086 SIK2Q9H0K1 926 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms