RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 CFAP157Q5JU67 520 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 BNIPLQ7Z465 357 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 ISL2Q96A47 359 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 RBBP8Q99708 897 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 CEP41Q9BYV8 373 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 KLK14Q9P0G3 267 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 MID2Q9UJV3 735 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 VANGL2Q9ULK5 521 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 WASF2Q9Y6W5 498 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 MAGEA13PA6NCF6 341 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 DCLK1O15075 740 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 AP2A1O95782 977 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 SMIM10L2AP0DMW4 78 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 SMIM10L2BP0DMW5 78 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 CPOXP36551 454 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 LIMK2P53671 638 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 XKR4Q5GH76 650 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 ZNF618Q5T7W0 954 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 OTUD1Q5VV17 481 aaPredicted RBP15.73■□□□□ 0.11
C9orf3-218ENST00000482056 PDPK2PQ6A1A2 396 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 ITPRIPL1Q6GPH6 555 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 DNAAF3Q8N9W5 541 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 NTAN1Q96AB6 310 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 ZNF669Q96BR6 464 aaPredicted RBP15.73■□□□□ 0.11
C9orf3-218ENST00000482056 SLC10A4Q96EP9 437 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 CLPTM1LQ96KA5 538 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 CDHR5Q9HBB8 845 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 RNF19AQ9NV58 838 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 TMEM216Q9P0N5 145 aa15.73■□□□□ 0.11
C9orf3-218ENST00000482056 MAGEB16A2A368 324 aa15.72■□□□□ 0.11
C9orf3-218ENST00000482056 TMEM114B3SHH9 223 aa15.72■□□□□ 0.11
C9orf3-218ENST00000482056 AP3B1O00203 1094 aa15.72■□□□□ 0.11
C9orf3-218ENST00000482056 USP1O94782 785 aa15.72■□□□□ 0.11
C9orf3-218ENST00000482056 PTPN1P18031 435 aaKnown RBP15.72■□□□□ 0.11
C9orf3-218ENST00000482056 MAGEA12P43365 314 aa15.72■□□□□ 0.11
C9orf3-218ENST00000482056 TPI1P60174 286 aa15.72■□□□□ 0.11
C9orf3-218ENST00000482056 DSG1Q02413 1049 aa15.72■□□□□ 0.11
C9orf3-218ENST00000482056 STRA8Q7Z7C7 330 aa15.72■□□□□ 0.11
C9orf3-218ENST00000482056 DCLK2Q8N568 766 aa15.72■□□□□ 0.11
C9orf3-218ENST00000482056 OR52K1Q8NGK4 314 aa15.72■□□□□ 0.11
C9orf3-218ENST00000482056 NDRG1Q92597 394 aaKnown RBP15.72■□□□□ 0.11
C9orf3-218ENST00000482056 JADE3Q92613 823 aa15.72■□□□□ 0.11
C9orf3-218ENST00000482056 SORT1Q99523 831 aa15.72■□□□□ 0.11
C9orf3-218ENST00000482056 LBHD1Q9BQE6 289 aaPredicted RBP15.72■□□□□ 0.11
C9orf3-218ENST00000482056 VCX3BQ9H321 246 aa15.72■□□□□ 0.11
C9orf3-218ENST00000482056 PNPOQ9NVS9 261 aa15.72■□□□□ 0.11
C9orf3-218ENST00000482056 GJD2Q9UKL4 321 aa15.72■□□□□ 0.11
C9orf3-218ENST00000482056 TRHDEQ9UKU6 1024 aa15.72■□□□□ 0.11
C9orf3-218ENST00000482056 ZNF236Q9UL36 1845 aa15.72■□□□□ 0.11
C9orf3-218ENST00000482056 SCN4AP35499 1836 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 A0A088AWK7 358 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 MEI4A8MW99 385 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 PDHXO00330 501 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 TIMM44O43615 452 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 HSPA4LO95757 839 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 BAG2O95816 211 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 FAM200BP0CF97 657 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 PTPN3P26045 913 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 PRDX6P30041 224 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 ADRA1BP35368 520 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 HCAR3P49019 387 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 NPY2RP49146 381 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 ZNF135P52742 658 aaPredicted RBP15.71■□□□□ 0.11
C9orf3-218ENST00000482056 LILRA4P59901 499 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 ITGA9Q13797 1035 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 ARL13BQ3SXY8 428 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 PPM1JQ5JR12 505 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 INTS6LQ5JSJ4 861 aaKnown RBP15.71■□□□□ 0.11
C9orf3-218ENST00000482056 DPY19L2Q6NUT2 758 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 ADGRG6Q86SQ4 1221 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 OSTM1Q86WC4 334 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 SLC7A14Q8TBB6 771 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 ZC3H15Q8WU90 426 aaKnown RBP15.71■□□□□ 0.11
C9orf3-218ENST00000482056 NR1H4Q96RI1 486 aaPredicted RBP15.71■□□□□ 0.11
C9orf3-218ENST00000482056 KRT82Q9NSB4 513 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 DLGAP2Q9P1A6 1054 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 SLC45A1Q9Y2W3 748 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 PCDHB12Q9Y5F1 795 aa15.71■□□□□ 0.11
C9orf3-218ENST00000482056 MBLAC1A4D2B0 266 aaPredicted RBP15.71■□□□□ 0.1
C9orf3-218ENST00000482056 UNCXA6NJT0 531 aa15.71■□□□□ 0.1
C9orf3-218ENST00000482056 KCNK1O00180 336 aa15.71■□□□□ 0.1
C9orf3-218ENST00000482056 CCNT2O60583 730 aaKnown RBP15.71■□□□□ 0.1
C9orf3-218ENST00000482056 APOA4P06727 396 aa15.71■□□□□ 0.1
C9orf3-218ENST00000482056 ERCC2P18074 760 aa15.71■□□□□ 0.1
C9orf3-218ENST00000482056 NCF2P19878 526 aaPredicted RBP15.71■□□□□ 0.1
C9orf3-218ENST00000482056 SP100P23497 879 aaPredicted RBP15.71■□□□□ 0.1
C9orf3-218ENST00000482056 GJA5P36382 358 aa15.71■□□□□ 0.1
C9orf3-218ENST00000482056 HADHAP40939 763 aa15.71■□□□□ 0.1
C9orf3-218ENST00000482056 TKTL1P51854 596 aa15.71■□□□□ 0.1
C9orf3-218ENST00000482056 CSE1LP55060 971 aaKnown RBP15.71■□□□□ 0.1
C9orf3-218ENST00000482056 PITX1P78337 314 aaPredicted RBP15.71■□□□□ 0.1
C9orf3-218ENST00000482056 IRX1P78414 480 aaPredicted RBP15.71■□□□□ 0.1
C9orf3-218ENST00000482056 SCAPQ12770 1279 aa15.71■□□□□ 0.1
C9orf3-218ENST00000482056 R3HDM1Q15032 1099 aaKnown RBP15.71■□□□□ 0.1
C9orf3-218ENST00000482056 CES3Q6UWW8 571 aa15.71■□□□□ 0.1
C9orf3-218ENST00000482056 USP50Q70EL3 339 aaPredicted RBP15.71■□□□□ 0.1
C9orf3-218ENST00000482056 MAML3Q96JK9 1138 aa15.71■□□□□ 0.1
C9orf3-218ENST00000482056 VAT1Q99536 393 aa15.71■□□□□ 0.1
C9orf3-218ENST00000482056 TTC1Q99614 292 aa15.71■□□□□ 0.1
C9orf3-218ENST00000482056 TINF2Q9BSI4 451 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms