RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 LRRK2Q5S007 2527 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 TTC34A8MYJ7 566 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 IL1BP01584 269 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 SLC8A3P57103 927 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 SKOR1P84550 965 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 RABEP1Q15276 862 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 ISXQ2M1V0 245 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 ZSCAN23Q3MJ62 389 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 CNNM4Q6P4Q7 775 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.5■□□□□ 0.07
HDAC6-224ENST00000481929 UNC13DQ70J99 1090 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 STK40Q8N2I9 435 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 EXD3Q8N9H8 876 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 FIBINQ8TAL6 211 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 MAPK15Q8TD08 544 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 LMLNQ96KR4 655 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 HEXIM2Q96MH2 286 aaKnown RBP15.5■□□□□ 0.07
HDAC6-224ENST00000481929 ULBP1Q9BZM6 244 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 NIF3L1Q9GZT8 377 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 OSBPL2Q9H1P3 480 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 UCKL1Q9NWZ5 548 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 STIM2Q9P246 746 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 TJP2Q9UDY2 1190 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 ERVW-1Q9UQF0 538 aa15.5■□□□□ 0.07
HDAC6-224ENST00000481929 ITIH6Q6UXX5 1313 aa15.49■□□□□ 0.07
HDAC6-224ENST00000481929 FLNCQ14315 2725 aa15.49■□□□□ 0.07
HDAC6-224ENST00000481929 TYW5A2RUC4 315 aaKnown RBP15.49■□□□□ 0.07
HDAC6-224ENST00000481929 IRAK2O43187 625 aa15.49■□□□□ 0.07
HDAC6-224ENST00000481929 MSI1O43347 362 aaKnown RBP15.49■□□□□ 0.07
HDAC6-224ENST00000481929 SRPRAP08240 638 aaKnown RBP15.49■□□□□ 0.07
HDAC6-224ENST00000481929 MZF1P28698 734 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-224ENST00000481929 SLC11A2P49281 568 aa15.49■□□□□ 0.07
HDAC6-224ENST00000481929 DUSP3P51452 185 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-224ENST00000481929 E2F4Q16254 413 aa15.49■□□□□ 0.07
HDAC6-224ENST00000481929 ZNF394Q53GI3 561 aa15.49■□□□□ 0.07
HDAC6-224ENST00000481929 SETMARQ53H47 684 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-224ENST00000481929 RNF219Q5W0B1 726 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-224ENST00000481929 PM20D1Q6GTS8 502 aa15.49■□□□□ 0.07
HDAC6-224ENST00000481929 CCDC117Q8IWD4 279 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-224ENST00000481929 HJURPQ8NCD3 748 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-224ENST00000481929 TMC2Q8TDI7 906 aa15.49■□□□□ 0.07
HDAC6-224ENST00000481929 NDRG1Q92597 394 aaKnown RBP15.49■□□□□ 0.07
HDAC6-224ENST00000481929 EDEM1Q92611 657 aa15.49■□□□□ 0.07
HDAC6-224ENST00000481929 KLHDC7BQ96G42 594 aa15.49■□□□□ 0.07
HDAC6-224ENST00000481929 SLC46A1Q96NT5 459 aa15.49■□□□□ 0.07
HDAC6-224ENST00000481929 BACH2Q9BYV9 841 aa15.49■□□□□ 0.07
HDAC6-224ENST00000481929 KDM4CQ9H3R0 1056 aa15.49■□□□□ 0.07
HDAC6-224ENST00000481929 USP29Q9HBJ7 922 aa15.49■□□□□ 0.07
HDAC6-224ENST00000481929 APOBEC3GQ9HC16 384 aaKnown RBP15.49■□□□□ 0.07
HDAC6-224ENST00000481929 SLC39A2Q9NP94 309 aa15.49■□□□□ 0.07
HDAC6-224ENST00000481929 INTS6Q9UL03 887 aaKnown RBP15.49■□□□□ 0.07
HDAC6-224ENST00000481929 CEP83Q9Y592 693 aa15.49■□□□□ 0.07
HDAC6-224ENST00000481929 GOLGA6L7A0A1B0GV03 622 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 PRAMEF26H0Y7S4 382 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 IKBKBO14920 756 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 SLC7A4O43246 635 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 LZTS3O60299 673 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-224ENST00000481929 DRD3P35462 400 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 CTSOP43234 321 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-224ENST00000481929 CDH18Q13634 790 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 ELAVL3Q14576 367 aaKnown RBP15.48■□□□□ 0.07
HDAC6-224ENST00000481929 ARL13BQ3SXY8 428 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 POM121L1PQ3SYA9 428 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 PITRM1Q5JRX3 1037 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 XKR5Q6UX68 686 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 BHLHA9Q7RTU4 235 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 TRIM69Q86WT6 500 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 CARNMT1Q8N4J0 409 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 DHX58Q96C10 678 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 GRAMD1AQ96CP6 724 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 APOLD1Q96LR9 279 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 IPO9Q96P70 1041 aaKnown RBP15.48■□□□□ 0.07
HDAC6-224ENST00000481929 CCNL2Q96S94 520 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-224ENST00000481929 C7orf25Q9BPX7 421 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 ARHGAP9Q9BRR9 750 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 KLHL11Q9NVR0 708 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 NLGN3Q9NZ94 848 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.48■□□□□ 0.07
HDAC6-224ENST00000481929 ANKMY1Q9P2S6 941 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 PCDHGA8Q9Y5G5 932 aa15.48■□□□□ 0.07
HDAC6-224ENST00000481929 MORC2Q9Y6X9 1032 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-224ENST00000481929 BOD1L1Q8NFC6 3051 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 PLRG1O43660 514 aaKnown RBP15.47■□□□□ 0.07
HDAC6-224ENST00000481929 RTN2O75298 545 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 PIAS2O75928 621 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 MOCS3O95396 460 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 THEGLP0DJG4 465 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 SLC6A4P31645 630 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 NFKB2Q00653 900 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 ECT2LQ008S8 904 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 KCNMA1Q12791 1236 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 CLN3Q13286 438 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 SPTAN1Q13813 2472 aaKnown RBP15.47■□□□□ 0.07
HDAC6-224ENST00000481929 SLC39A14Q15043 492 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 FAM133BQ5BKY9 247 aaKnown RBP15.47■□□□□ 0.07
HDAC6-224ENST00000481929 BSPRYQ5W0U4 402 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 NUGGCQ68CJ6 796 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 FAM173BQ6P4H8 233 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 SLC9A9Q8IVB4 645 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 UNC45BQ8IWX7 931 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms