RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 C1QAP02745 245 aa20.36■□□□□ 0.85
CHKB-209ENST00000481673 SNRPAP09012 282 aaKnown RBP20.36■□□□□ 0.85
CHKB-209ENST00000481673 HAPLN1P10915 354 aaPredicted RBP20.36■□□□□ 0.85
CHKB-209ENST00000481673 PGAM1P18669 254 aa20.36■□□□□ 0.85
CHKB-209ENST00000481673 RFC2P35250 354 aa20.36■□□□□ 0.85
CHKB-209ENST00000481673 PPARDQ03181 441 aa20.36■□□□□ 0.85
CHKB-209ENST00000481673 FAAP100Q0VG06 881 aa20.36■□□□□ 0.85
CHKB-209ENST00000481673 SEPT7Q16181 437 aaKnown RBP20.36■□□□□ 0.85
CHKB-209ENST00000481673 TIGD7Q6NT04 549 aaPredicted RBP20.36■□□□□ 0.85
CHKB-209ENST00000481673 RGS9BPQ6ZS82 235 aa20.36■□□□□ 0.85
CHKB-209ENST00000481673 ATP6V0D2Q8N8Y2 350 aa20.36■□□□□ 0.85
CHKB-209ENST00000481673 CCDC197Q8NCU1 140 aa20.36■□□□□ 0.85
CHKB-209ENST00000481673 CDKL2Q92772 493 aa20.36■□□□□ 0.85
CHKB-209ENST00000481673 FBXO32Q969P5 355 aa20.36■□□□□ 0.85
CHKB-209ENST00000481673 PLCD4Q9BRC7 762 aa20.36■□□□□ 0.85
CHKB-209ENST00000481673 TTC3P53804 2025 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 TBX4P57082 545 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 ITIH4Q14624 930 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 EFTUD2Q15029 972 aaKnown RBP eCLIP20.35■□□□□ 0.857e-7■■■■□ 22.4
CHKB-209ENST00000481673 USP41Q3LFD5 358 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 CTAGE3PQ8IX95 158 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 ZNF276Q8N554 614 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 SCLYQ96I15 445 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 PGLYRP2Q96PD5 576 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 PPARGC1AQ9UBK2 798 aaKnown RBP20.35■□□□□ 0.85
CHKB-209ENST00000481673 NEU3Q9UQ49 428 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 RRP15Q9Y3B9 282 aaKnown RBP20.35■□□□□ 0.85
CHKB-209ENST00000481673 BACE2Q9Y5Z0 518 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 A0A1W2PPM1 405 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 FOXO6A8MYZ6 492 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 POLBP06746 335 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 TUFMP49411 452 aaKnown RBP20.35■□□□□ 0.85
CHKB-209ENST00000481673 TUBP50607 506 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 CCL23P55773 120 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 DNAJC3Q13217 504 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 FRG1Q14331 258 aaKnown RBP20.35■□□□□ 0.85
CHKB-209ENST00000481673 QPCTQ16769 361 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 MGAT5BQ3V5L5 792 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 CNKSR3Q6P9H4 555 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 C6orf89Q6UWU4 347 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 LINC00523Q86TU6 105 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 ATPAF2Q8N5M1 289 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 PPM1NQ8N819 430 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 RTL3Q8N8U3 475 aaKnown RBP20.35■□□□□ 0.85
CHKB-209ENST00000481673 BANPQ8N9N5 519 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 ZNF784Q8NCA9 323 aaPredicted RBP20.35■□□□□ 0.85
CHKB-209ENST00000481673 DPF3Q92784 378 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 CRISPLD2Q9H0B8 497 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 OSER1Q9NX31 292 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 BFARQ9NZS9 450 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 HSFX1Q9UBD0 423 aa20.35■□□□□ 0.85
CHKB-209ENST00000481673 AAR2Q9Y312 384 aaKnown RBP20.35■□□□□ 0.85
CHKB-209ENST00000481673 TCP11X1B4DZS4 312 aa20.34■□□□□ 0.85
CHKB-209ENST00000481673 E9PAM4 449 aa20.34■□□□□ 0.85
CHKB-209ENST00000481673 NPY2RP49146 381 aa20.34■□□□□ 0.85
CHKB-209ENST00000481673 GATMP50440 423 aa20.34■□□□□ 0.85
CHKB-209ENST00000481673 ARPP19P56211 112 aa20.34■□□□□ 0.85
CHKB-209ENST00000481673 SLC18A2Q05940 514 aa20.34■□□□□ 0.85
CHKB-209ENST00000481673 RING1Q06587 406 aa20.34■□□□□ 0.85
CHKB-209ENST00000481673 TRIP4Q15650 581 aaPredicted RBP20.34■□□□□ 0.85
CHKB-209ENST00000481673 RTP2Q5QGT7 225 aa20.34■□□□□ 0.85
CHKB-209ENST00000481673 HHATQ5VTY9 493 aa20.34■□□□□ 0.85
CHKB-209ENST00000481673 SLC8B1Q6J4K2 584 aa20.34■□□□□ 0.85
CHKB-209ENST00000481673 CASC4Q6P4E1 433 aa20.34■□□□□ 0.85
CHKB-209ENST00000481673 TP53INP2Q8IXH6 220 aa20.34■□□□□ 0.85
CHKB-209ENST00000481673 KLHDC8BQ8IXV7 354 aa20.34■□□□□ 0.85
CHKB-209ENST00000481673 C4orf33Q8N1A6 199 aa20.34■□□□□ 0.85
CHKB-209ENST00000481673 FATE1Q969F0 183 aa20.34■□□□□ 0.85
CHKB-209ENST00000481673 BTN2A3PQ96KV6 586 aa20.34■□□□□ 0.85
CHKB-209ENST00000481673 TGS1Q96RS0 853 aaKnown RBP20.34■□□□□ 0.85
CHKB-209ENST00000481673 LRRC40Q9H9A6 602 aa20.34■□□□□ 0.85
CHKB-209ENST00000481673 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.34■□□□□ 0.85
CHKB-209ENST00000481673 GMIPQ9P107 970 aa20.34■□□□□ 0.85
CHKB-209ENST00000481673 SNX10Q9Y5X0 201 aa20.34■□□□□ 0.85
CHKB-209ENST00000481673 NR2E3Q9Y5X4 410 aa20.34■□□□□ 0.85
CHKB-209ENST00000481673 HS3ST4Q9Y661 456 aa20.34■□□□□ 0.85
CHKB-209ENST00000481673 ARHGAP42A6NI28 874 aa20.33■□□□□ 0.85
CHKB-209ENST00000481673 MATN3O15232 486 aa20.33■□□□□ 0.85
CHKB-209ENST00000481673 ZBTB24O43167 697 aaPredicted RBP20.33■□□□□ 0.85
CHKB-209ENST00000481673 MSI1O43347 362 aaKnown RBP20.33■□□□□ 0.85
CHKB-209ENST00000481673 CACNG3O60359 315 aa20.33■□□□□ 0.85
CHKB-209ENST00000481673 SPAG7O75391 227 aa20.33■□□□□ 0.85
CHKB-209ENST00000481673 RPA3P35244 121 aaPredicted RBP20.33■□□□□ 0.85
CHKB-209ENST00000481673 GRIA1P42261 906 aa20.33■□□□□ 0.85
CHKB-209ENST00000481673 PGFP49763 221 aa20.33■□□□□ 0.85
CHKB-209ENST00000481673 WDR4P57081 412 aaKnown RBP20.33■□□□□ 0.85
CHKB-209ENST00000481673 TLE2Q04725 743 aa20.33■□□□□ 0.85
CHKB-209ENST00000481673 KCTD11Q693B1 232 aa20.33■□□□□ 0.85
CHKB-209ENST00000481673 PRPF39Q86UA1 669 aaKnown RBP20.33■□□□□ 0.85
CHKB-209ENST00000481673 RETREG1Q9H6L5 497 aa20.33■□□□□ 0.85
CHKB-209ENST00000481673 PLAC1Q9HBJ0 212 aa20.33■□□□□ 0.85
CHKB-209ENST00000481673 EFEMP2O95967 443 aa20.33■□□□□ 0.84
CHKB-209ENST00000481673 GPR15P49685 360 aa20.33■□□□□ 0.84
CHKB-209ENST00000481673 NDST2P52849 883 aa20.33■□□□□ 0.84
CHKB-209ENST00000481673 ATN1P54259 1190 aaPredicted RBP20.33■□□□□ 0.84
CHKB-209ENST00000481673 USP46P62068 366 aa20.33■□□□□ 0.84
CHKB-209ENST00000481673 PDK4Q16654 411 aa20.33■□□□□ 0.84
CHKB-209ENST00000481673 TCTN1Q2MV58 587 aa20.33■□□□□ 0.84
CHKB-209ENST00000481673 ANO4Q32M45 955 aa20.33■□□□□ 0.84
CHKB-209ENST00000481673 SDHAF4Q5VUM1 108 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms