RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 TTC31Q49AM3 519 aaPredicted RBP19.17■□□□□ 0.66
CLK1-211ENST00000481641 PTPN20Q4JDL3 420 aa19.17■□□□□ 0.66
CLK1-211ENST00000481641 VWA3BQ502W6 1294 aa19.17■□□□□ 0.66
CLK1-211ENST00000481641 EFHC1Q5JVL4 640 aa19.17■□□□□ 0.66
CLK1-211ENST00000481641 OLFML1Q6UWY5 402 aa19.17■□□□□ 0.66
CLK1-211ENST00000481641 LAYNQ6UX15 382 aa19.17■□□□□ 0.66
CLK1-211ENST00000481641 UNQ6494/PRO21346Q6UXR6 183 aa19.17■□□□□ 0.66
CLK1-211ENST00000481641 C11orf57Q6ZUT1 292 aaPredicted RBP19.17■□□□□ 0.66
CLK1-211ENST00000481641 NAXDQ8IW45 347 aa19.17■□□□□ 0.66
CLK1-211ENST00000481641 TUBGCP2Q9BSJ2 902 aa19.17■□□□□ 0.66
CLK1-211ENST00000481641 ZDHHC5Q9C0B5 715 aa19.17■□□□□ 0.66
CLK1-211ENST00000481641 PCED1AQ9H1Q7 454 aa19.17■□□□□ 0.66
CLK1-211ENST00000481641 PABPC3Q9H361 631 aaKnown RBP19.17■□□□□ 0.66
CLK1-211ENST00000481641 ASNSD1Q9NWL6 643 aa19.17■□□□□ 0.66
CLK1-211ENST00000481641 SLC12A6Q9UHW9 1150 aa19.17■□□□□ 0.66
CLK1-211ENST00000481641 KLK13Q9UKR3 277 aa19.17■□□□□ 0.66
CLK1-211ENST00000481641 FNDC3AQ9Y2H6 1198 aaKnown RBP19.17■□□□□ 0.66
CLK1-211ENST00000481641 FAM47DPA6NHR8 397 aa19.16■□□□□ 0.66
CLK1-211ENST00000481641 MID1O15344 667 aa19.16■□□□□ 0.66
CLK1-211ENST00000481641 HSF2BPO75031 334 aa19.16■□□□□ 0.66
CLK1-211ENST00000481641 MOCS3O95396 460 aa19.16■□□□□ 0.66
CLK1-211ENST00000481641 PROS1P07225 676 aa19.16■□□□□ 0.66
CLK1-211ENST00000481641 GLI1P08151 1106 aa19.16■□□□□ 0.66
CLK1-211ENST00000481641 SRPRAP08240 638 aaKnown RBP19.16■□□□□ 0.66
CLK1-211ENST00000481641 ABCB4P21439 1286 aa19.16■□□□□ 0.66
CLK1-211ENST00000481641 CENPCQ03188 943 aa19.16■□□□□ 0.66
CLK1-211ENST00000481641 KCNMA1Q12791 1236 aa19.16■□□□□ 0.66
CLK1-211ENST00000481641 NME3Q13232 169 aa19.16■□□□□ 0.66
CLK1-211ENST00000481641 SLC14A1Q13336 389 aa19.16■□□□□ 0.66
CLK1-211ENST00000481641 TRIP6Q15654 476 aaKnown RBP19.16■□□□□ 0.66
CLK1-211ENST00000481641 FBXL22Q6P050 247 aa19.16■□□□□ 0.66
CLK1-211ENST00000481641 MMAAQ8IVH4 418 aaKnown RBP19.16■□□□□ 0.66
CLK1-211ENST00000481641 CCAR2Q8N163 923 aaKnown RBP19.16■□□□□ 0.66
CLK1-211ENST00000481641 CHCHD4Q8N4Q1 142 aa19.16■□□□□ 0.66
CLK1-211ENST00000481641 IGSF8Q969P0 613 aa19.16■□□□□ 0.66
CLK1-211ENST00000481641 TMEM121BQ9BXQ6 578 aaPredicted RBP19.16■□□□□ 0.66
CLK1-211ENST00000481641 SGK2Q9HBY8 427 aa19.16■□□□□ 0.66
CLK1-211ENST00000481641 TM9SF3Q9HD45 589 aa19.16■□□□□ 0.66
CLK1-211ENST00000481641 FBXL12Q9NXK8 326 aa19.16■□□□□ 0.66
CLK1-211ENST00000481641 FHOD1Q9Y613 1164 aa19.16■□□□□ 0.66
CLK1-211ENST00000481641 IGF2RP11717 2491 aa19.16■□□□□ 0.66
CLK1-211ENST00000481641 SPEGQ15772 3267 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 A0A1W2PP55 124 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 PES1O00541 588 aaKnown RBP19.15■□□□□ 0.66
CLK1-211ENST00000481641 KCNK3O14649 394 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 VAV1P15498 845 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 CCR1P32246 355 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 MATKP42679 507 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 SLC6A3Q01959 620 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 RAPGEF1Q13905 1077 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 DRAP1Q14919 205 aaPredicted RBP19.15■□□□□ 0.66
CLK1-211ENST00000481641 CST6Q15828 149 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 KIF19Q2TAC6 998 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 C14orf80Q86SX3 495 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 FAM114A1Q8IWE2 563 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 FAM71AQ8IYT1 594 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 STK40Q8N2I9 435 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 NOX5Q96PH1 765 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 FAM129BQ96TA1 746 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 NUP62CLQ9H1M0 184 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 NEUROG2Q9H2A3 272 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 SYNCQ9H7C4 482 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 SAMSN1Q9NSI8 373 aaKnown RBP19.15■□□□□ 0.66
CLK1-211ENST00000481641 NCKAP1Q9Y2A7 1128 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 PCDHB9Q9Y5E1 797 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 SNX11Q9Y5W9 270 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 CABIN1Q9Y6J0 2220 aa19.15■□□□□ 0.66
CLK1-211ENST00000481641 TMEM131Q92545 1883 aa19.14■□□□□ 0.65
CLK1-211ENST00000481641 ASPMQ8IZT6 3477 aa19.14■□□□□ 0.65
CLK1-211ENST00000481641 EDDM13A0A1B0GTR0 161 aa19.14■□□□□ 0.65
CLK1-211ENST00000481641 RNASEH1O60930 286 aaKnown RBP19.14■□□□□ 0.65
CLK1-211ENST00000481641 DAB1O75553 588 aa19.14■□□□□ 0.65
CLK1-211ENST00000481641 SLC2A3P11169 496 aa19.14■□□□□ 0.65
CLK1-211ENST00000481641 TFE3P19532 575 aaPredicted RBP19.14■□□□□ 0.65
CLK1-211ENST00000481641 ERCC5P28715 1186 aaPredicted RBP19.14■□□□□ 0.65
CLK1-211ENST00000481641 PSMD8P48556 350 aa19.14■□□□□ 0.65
CLK1-211ENST00000481641 AFF3P51826 1226 aaKnown RBP19.14■□□□□ 0.65
CLK1-211ENST00000481641 RNASE9P60153 205 aaKnown RBP19.14■□□□□ 0.65
CLK1-211ENST00000481641 AUHQ13825 339 aaKnown RBP19.14■□□□□ 0.65
CLK1-211ENST00000481641 ARID5BQ14865 1188 aa19.14■□□□□ 0.65
CLK1-211ENST00000481641 KCNT1Q5JUK3 1230 aa19.14■□□□□ 0.65
CLK1-211ENST00000481641 OTUD1Q5VV17 481 aaPredicted RBP19.14■□□□□ 0.65
CLK1-211ENST00000481641 RNF219Q5W0B1 726 aaPredicted RBP19.14■□□□□ 0.65
CLK1-211ENST00000481641 CXorf57Q6NSI4 855 aaKnown RBP19.14■□□□□ 0.65
CLK1-211ENST00000481641 PNPLA1Q8N8W4 532 aa19.14■□□□□ 0.65
CLK1-211ENST00000481641 KDM1BQ8NB78 822 aa19.14■□□□□ 0.65
CLK1-211ENST00000481641 OR52K2Q8NGK3 314 aa19.14■□□□□ 0.65
CLK1-211ENST00000481641 SETD7Q8WTS6 366 aaKnown RBP19.14■□□□□ 0.65
CLK1-211ENST00000481641 GATA6Q92908 595 aa19.14■□□□□ 0.65
CLK1-211ENST00000481641 PTPRN2Q92932 1015 aa19.14■□□□□ 0.65
CLK1-211ENST00000481641 RPRD1AQ96P16 312 aaPredicted RBP19.14■□□□□ 0.65
CLK1-211ENST00000481641 ORAI3Q9BRQ5 295 aa19.14■□□□□ 0.65
CLK1-211ENST00000481641 TM7SF3Q9NS93 570 aa19.14■□□□□ 0.65
CLK1-211ENST00000481641 VANGL2Q9ULK5 521 aa19.14■□□□□ 0.65
CLK1-211ENST00000481641 SNX10Q9Y5X0 201 aa19.14■□□□□ 0.65
CLK1-211ENST00000481641 HS3ST4Q9Y661 456 aa19.14■□□□□ 0.65
CLK1-211ENST00000481641 ITIH6Q6UXX5 1313 aa19.14■□□□□ 0.65
CLK1-211ENST00000481641 TARSL2A2RTX5 802 aaKnown RBP19.13■□□□□ 0.65
CLK1-211ENST00000481641 M0QYT0 321 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 RNASEH2AO75792 299 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms