RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 NGEFQ8N5V2 710 aa3.97□□□□□ -1.77
NF1-209ENST00000479536 RP9Q8TA86 221 aaKnown RBP3.97□□□□□ -1.77
NF1-209ENST00000479536 ASB10Q8WXI3 467 aa3.97□□□□□ -1.77
NF1-209ENST00000479536 RSRC1Q96IZ7 334 aaKnown RBP3.97□□□□□ -1.77
NF1-209ENST00000479536 PBKQ96KB5 322 aa3.97□□□□□ -1.77
NF1-209ENST00000479536 TIGD1Q96MW7 591 aa3.97□□□□□ -1.77
NF1-209ENST00000479536 AIFM2Q9BRQ8 373 aa3.97□□□□□ -1.77
NF1-209ENST00000479536 WDR11Q9BZH6 1224 aa3.97□□□□□ -1.77
NF1-209ENST00000479536 USP44Q9H0E7 712 aa3.97□□□□□ -1.77
NF1-209ENST00000479536 INTS2Q9H0H0 1204 aaKnown RBP3.97□□□□□ -1.77
NF1-209ENST00000479536 PDCL3Q9H2J4 239 aa3.97□□□□□ -1.77
NF1-209ENST00000479536 MROH8Q9H579 483 aa3.97□□□□□ -1.77
NF1-209ENST00000479536 SNX15Q9NRS6 342 aa3.97□□□□□ -1.77
NF1-209ENST00000479536 VPS4AQ9UN37 437 aa3.97□□□□□ -1.77
NF1-209ENST00000479536 GPR34Q9UPC5 381 aa3.97□□□□□ -1.77
NF1-209ENST00000479536 NAALADL1Q9UQQ1 740 aa3.97□□□□□ -1.77
NF1-209ENST00000479536 ENTPD2Q9Y5L3 495 aa3.97□□□□□ -1.77
NF1-209ENST00000479536 COPG1Q9Y678 874 aaKnown RBP3.97□□□□□ -1.77
NF1-209ENST00000479536 FAM90A7PA6NKC0 464 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 SH2D7A6NKC9 451 aaPredicted RBP3.96□□□□□ -1.78
NF1-209ENST00000479536 FAM90A22PA8MWA6 464 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 FAM90A12PA8MX19 464 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 FAM90A23PA8MXZ1 464 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 ZNF213O14771 459 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 TCERG1O14776 1098 aaKnown RBP3.96□□□□□ -1.78
NF1-209ENST00000479536 PEX1O43933 1283 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 TIPRLO75663 272 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 MBPP02686 304 aaPredicted RBP3.96□□□□□ -1.78
NF1-209ENST00000479536 EGR2P11161 476 aaPredicted RBP3.96□□□□□ -1.78
NF1-209ENST00000479536 LYL1P12980 280 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 RPS6KB1P23443 525 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 ITPKBP27987 946 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 PCSK6P29122 969 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 GALNSP34059 522 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 STAT1P42224 750 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 GPD2P43304 727 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 JAK3P52333 1124 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 ARF3P61204 181 aaPredicted RBP3.96□□□□□ -1.78
NF1-209ENST00000479536 GPC5P78333 572 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 ARF1P84077 181 aaKnown RBP3.96□□□□□ -1.78
NF1-209ENST00000479536 PSG6Q00889 435 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 SETQ01105 290 aaPredicted RBP3.96□□□□□ -1.78
NF1-209ENST00000479536 NUCB1Q02818 461 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 GOLGA8FQ08AF8 430 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 RUNDC3AQ59EK9 446 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 LCE1AQ5T7P2 110 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 INO80CQ6PI98 192 aaPredicted RBP3.96□□□□□ -1.78
NF1-209ENST00000479536 ATF7IPQ6VMQ6 1270 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 CPLX4Q7Z7G2 160 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 DIS3L2Q8IYB7 885 aaKnown RBP3.96□□□□□ -1.78
NF1-209ENST00000479536 NFKBIDQ8NI38 313 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 ZCCHC10Q8TBK6 192 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 KCNG4Q8TDN1 519 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 NELL1Q92832 810 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 ELP4Q96EB1 424 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 RNFT2Q96EX2 444 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 Q96MF0 132 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 SERINC2Q96SA4 455 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 NUDT16L1Q9BRJ7 211 aaKnown RBP3.96□□□□□ -1.78
NF1-209ENST00000479536 SLC25A18Q9H1K4 315 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 USP29Q9HBJ7 922 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 ARHGEF3Q9NR81 526 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 THAP1Q9NVV9 213 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 ALKBH4Q9NXW9 302 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 NSMCE4AQ9NXX6 385 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 TBC1D14Q9P2M4 693 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 RNF7Q9UBF6 113 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 SLC25A10Q9UBX3 287 aaPredicted RBP3.96□□□□□ -1.78
NF1-209ENST00000479536 CD207Q9UJ71 328 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 FRMD4BQ9Y2L6 1034 aa3.96□□□□□ -1.78
NF1-209ENST00000479536 ARHGEF17Q96PE2 2063 aaPredicted RBP3.96□□□□□ -1.78
NF1-209ENST00000479536 NPIPB13A6NJU9 1138 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 NPIPB5A8MRT5 1133 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 NPIPB4C9JG80 1138 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 MPPED1O15442 326 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 PTP4A3O75365 173 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 KAT7O95251 611 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 SCGB1D1O95968 90 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 C1RP00736 705 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 CLEC3BP05452 202 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 HSPA1AP0DMV8 641 aaKnown RBP3.95□□□□□ -1.78
NF1-209ENST00000479536 HSPA1BP0DMV9 641 aaKnown RBP3.95□□□□□ -1.78
NF1-209ENST00000479536 MYCLP12524 364 aaPredicted RBP3.95□□□□□ -1.78
NF1-209ENST00000479536 ENGP17813 658 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 IGFBP2P18065 325 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 DUSP1P28562 367 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 EPHA8P29322 1005 aaPredicted RBP3.95□□□□□ -1.78
NF1-209ENST00000479536 CYP2C18P33260 490 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 FOLR3P41439 243 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 CDH15P55291 814 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 LMAN2Q12907 356 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 PTP4A2Q12974 167 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 EIF4A2Q14240 407 aaKnown RBP3.95□□□□□ -1.78
NF1-209ENST00000479536 NAA25Q14CX7 972 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 TBCEQ15813 527 aaPredicted RBP3.95□□□□□ -1.78
NF1-209ENST00000479536 CCNG2Q16589 344 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 ERCC6LQ2NKX8 1250 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 TBC1D25Q3MII6 688 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 PLAC9Q5JTB6 97 aa3.95□□□□□ -1.78
NF1-209ENST00000479536 SNX30Q5VWJ9 437 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms