RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 PTPRQQ9UMZ3 2332 aa16.68■□□□□ 0.26
DDX56-210ENST00000479440 YJEFN3A6XGL0 299 aa16.68■□□□□ 0.26
DDX56-210ENST00000479440 E7ENQ6 273 aa16.68■□□□□ 0.26
DDX56-210ENST00000479440 LATO43561 262 aa16.68■□□□□ 0.26
DDX56-210ENST00000479440 ACSL4O60488 711 aa16.68■□□□□ 0.26
DDX56-210ENST00000479440 IGLV3-27P01718 113 aa16.68■□□□□ 0.26
DDX56-210ENST00000479440 GTF2H1P32780 548 aa16.68■□□□□ 0.26
DDX56-210ENST00000479440 PPP2CBP62714 309 aa16.68■□□□□ 0.26
DDX56-210ENST00000479440 PPP2CAP67775 309 aa16.68■□□□□ 0.26
DDX56-210ENST00000479440 ELAVL3Q14576 367 aaKnown RBP16.68■□□□□ 0.26
DDX56-210ENST00000479440 NFIL3Q16649 462 aa16.68■□□□□ 0.26
DDX56-210ENST00000479440 FAM133BQ5BKY9 247 aaKnown RBP16.68■□□□□ 0.26
DDX56-210ENST00000479440 PITRM1Q5JRX3 1037 aa16.68■□□□□ 0.26
DDX56-210ENST00000479440 CARNMT1Q8N4J0 409 aa16.68■□□□□ 0.26
DDX56-210ENST00000479440 KCNE4Q8WWG9 221 aa16.68■□□□□ 0.26
DDX56-210ENST00000479440 TATDN2Q93075 761 aa16.68■□□□□ 0.26
DDX56-210ENST00000479440 LMLNQ96KR4 655 aa16.68■□□□□ 0.26
DDX56-210ENST00000479440 DEPDC7Q96QD5 511 aa16.68■□□□□ 0.26
DDX56-210ENST00000479440 KDM4CQ9H3R0 1056 aa16.68■□□□□ 0.26
DDX56-210ENST00000479440 CNGB3Q9NQW8 809 aa16.68■□□□□ 0.26
DDX56-210ENST00000479440 ERVW-1Q9UQF0 538 aa16.68■□□□□ 0.26
DDX56-210ENST00000479440 DMTF1Q9Y222 760 aa16.68■□□□□ 0.26
DDX56-210ENST00000479440 ZNF462Q96JM2 2506 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 TBC1D3DA0A087WVF3 549 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 TBC1D3IA0A087WXS9 549 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 TBC1D3EA0A087X179 549 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 TBC1D3KA0A087X1G2 549 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 TBC1D3FA6NER0 549 aaPredicted RBP16.67■□□□□ 0.26
DDX56-210ENST00000479440 B8ZZF3 427 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 TBC1D3LB9A6J9 549 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 TULP2O00295 520 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 SLC7A4O43246 635 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 TBC1D3HP0C7X1 549 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 SETSIPP0DME0 302 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 MZF1P28698 734 aaPredicted RBP16.67■□□□□ 0.26
DDX56-210ENST00000479440 SLC6A4P31645 630 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 MXI1P50539 228 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 GABREP78334 506 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 ZNF211Q13398 564 aaPredicted RBP16.67■□□□□ 0.26
DDX56-210ENST00000479440 SGO2Q562F6 1265 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 ARHGAP40Q5TG30 622 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 TBC1D3GQ6DHY5 549 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 TBC1D3CQ6IPX1 549 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 SPATS2Q86XZ4 545 aaKnown RBP16.67■□□□□ 0.26
DDX56-210ENST00000479440 TBC1D3Q8IZP1 549 aaPredicted RBP16.67■□□□□ 0.26
DDX56-210ENST00000479440 SCML4Q8N228 414 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 FAM181AQ8N9Y4 354 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 HIC2Q96JB3 615 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 CPNE5Q9HCH3 593 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 INTS6Q9UL03 887 aaKnown RBP16.67■□□□□ 0.26
DDX56-210ENST00000479440 PCDHB1Q9Y5F3 818 aa16.67■□□□□ 0.26
DDX56-210ENST00000479440 NYNRINQ9P2P1 1898 aaKnown RBP16.67■□□□□ 0.26
DDX56-210ENST00000479440 MYLKQ15746 1914 aa16.66■□□□□ 0.26
DDX56-210ENST00000479440 GOLGA6L7A0A1B0GV03 622 aa16.66■□□□□ 0.26
DDX56-210ENST00000479440 TTC34A8MYJ7 566 aa16.66■□□□□ 0.26
DDX56-210ENST00000479440 SIGLEC6O43699 453 aa16.66■□□□□ 0.26
DDX56-210ENST00000479440 SDC3O75056 442 aa16.66■□□□□ 0.26
DDX56-210ENST00000479440 DXOO77932 396 aaKnown RBP16.66■□□□□ 0.26
DDX56-210ENST00000479440 IL1BP01584 269 aa16.66■□□□□ 0.26
DDX56-210ENST00000479440 C6P13671 934 aa16.66■□□□□ 0.26
DDX56-210ENST00000479440 RPL13P26373 211 aaKnown RBP16.66■□□□□ 0.26
DDX56-210ENST00000479440 PSMC2P35998 433 aaKnown RBP16.66■□□□□ 0.26
DDX56-210ENST00000479440 NNMTP40261 264 aa16.66■□□□□ 0.26
DDX56-210ENST00000479440 TBX4P57082 545 aa16.66■□□□□ 0.26
DDX56-210ENST00000479440 DAOAP59103 153 aa16.66■□□□□ 0.26
DDX56-210ENST00000479440 ERVPABLB-1P60509 514 aa16.66■□□□□ 0.26
DDX56-210ENST00000479440 STAT4Q14765 748 aa16.66■□□□□ 0.26
DDX56-210ENST00000479440 RESP18Q5W5W9 173 aa16.66■□□□□ 0.26
DDX56-210ENST00000479440 FBXL13Q8NEE6 735 aa16.66■□□□□ 0.26
DDX56-210ENST00000479440 KCTD13Q8WZ19 329 aa16.66■□□□□ 0.26
DDX56-210ENST00000479440 AZIN2Q96A70 460 aa16.66■□□□□ 0.26
DDX56-210ENST00000479440 THSD1Q9NS62 852 aa16.66■□□□□ 0.26
DDX56-210ENST00000479440 EVA1BQ9NVM1 165 aa16.66■□□□□ 0.26
DDX56-210ENST00000479440 SERTAD1Q9UHV2 236 aa16.66■□□□□ 0.26
DDX56-210ENST00000479440 CYTH4Q9UIA0 394 aa16.66■□□□□ 0.26
DDX56-210ENST00000479440 STX10O60499 249 aa16.65■□□□□ 0.26
DDX56-210ENST00000479440 MPOP05164 745 aa16.65■□□□□ 0.26
DDX56-210ENST00000479440 MYL1P05976 194 aa16.65■□□□□ 0.26
DDX56-210ENST00000479440 ME1P48163 572 aa16.65■□□□□ 0.26
DDX56-210ENST00000479440 YWHAEP62258 255 aaKnown RBP16.65■□□□□ 0.26
DDX56-210ENST00000479440 ECT2LQ008S8 904 aa16.65■□□□□ 0.26
DDX56-210ENST00000479440 KCNC4Q03721 635 aa16.65■□□□□ 0.26
DDX56-210ENST00000479440 DSG4Q86SJ6 1040 aa16.65■□□□□ 0.26
DDX56-210ENST00000479440 TRIM69Q86WT6 500 aa16.65■□□□□ 0.26
DDX56-210ENST00000479440 STK40Q8N2I9 435 aa16.65■□□□□ 0.26
DDX56-210ENST00000479440 OR4C6Q8NH72 309 aa16.65■□□□□ 0.26
DDX56-210ENST00000479440 IRGQQ8WZA9 623 aa16.65■□□□□ 0.26
DDX56-210ENST00000479440 SPAG5Q96R06 1193 aa16.65■□□□□ 0.26
DDX56-210ENST00000479440 FAM129BQ96TA1 746 aa16.65■□□□□ 0.26
DDX56-210ENST00000479440 DPH1Q9BZG8 443 aa16.65■□□□□ 0.26
DDX56-210ENST00000479440 RAB20Q9NX57 234 aa16.65■□□□□ 0.26
DDX56-210ENST00000479440 PRAMEF26H0Y7S4 382 aa16.64■□□□□ 0.25
DDX56-210ENST00000479440 TRIM38O00635 465 aa16.64■□□□□ 0.25
DDX56-210ENST00000479440 ARHGAP6O43182 974 aa16.64■□□□□ 0.25
DDX56-210ENST00000479440 KLK10O43240 276 aa16.64■□□□□ 0.25
DDX56-210ENST00000479440 PLRG1O43660 514 aaKnown RBP16.64■□□□□ 0.25
DDX56-210ENST00000479440 LUC7L3O95232 432 aaKnown RBP16.64■□□□□ 0.25
DDX56-210ENST00000479440 ALPPL2P10696 532 aa16.64■□□□□ 0.25
DDX56-210ENST00000479440 LCP1P13796 627 aa16.64■□□□□ 0.25
DDX56-210ENST00000479440 CD19P15391 556 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms