RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 CLIC5Q9NZA1 410 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 ANKRD6Q9Y2G4 727 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 SLC27A6Q9Y2P4 619 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.93□□□□□ -1.3
VCP-205ENST00000479300 PLXNA2O75051 1894 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 KNTC1P50748 2209 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 COL5A1P20908 1838 aaPredicted RBP6.92□□□□□ -1.3
VCP-205ENST00000479300 C10orf142B7Z368 130 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 PCDHGA12O60330 932 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 HMBSP08397 361 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 SETSIPP0DME0 302 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 VDRP11473 427 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 HLA-EP13747 358 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 CTSKP43235 329 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 HARS2P49590 506 aaKnown RBP6.92□□□□□ -1.3
VCP-205ENST00000479300 AFF3P51826 1226 aaKnown RBP6.92□□□□□ -1.3
VCP-205ENST00000479300 TKTL1P51854 596 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 KIF11P52732 1056 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 BCAT1P54687 386 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 RAD23BP54727 409 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 YWHAGP61981 247 aaKnown RBP eCLIP6.92□□□□□ -1.3
VCP-205ENST00000479300 BST2Q10589 180 aaKnown RBP6.92□□□□□ -1.3
VCP-205ENST00000479300 EFEMP1Q12805 493 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 DNAJC3Q13217 504 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 CUL2Q13617 745 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 STARD3Q14849 445 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 STILQ15468 1287 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 ZSCAN26Q16670 478 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 TTC31Q49AM3 519 aaPredicted RBP6.92□□□□□ -1.3
VCP-205ENST00000479300 PRAMEF14Q5SWL7 426 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 C6orf132Q5T0Z8 1188 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 SWT1Q5T5J6 900 aaKnown RBP6.92□□□□□ -1.3
VCP-205ENST00000479300 ARHGAP17Q68EM7 881 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 SARM1Q6SZW1 724 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 IL27RAQ6UWB1 636 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 CCDC91Q7Z6B0 441 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 GATAD2AQ86YP4 633 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 CCDC117Q8IWD4 279 aaPredicted RBP6.92□□□□□ -1.3
VCP-205ENST00000479300 ZC3H3Q8IXZ2 948 aaKnown RBP6.92□□□□□ -1.3
VCP-205ENST00000479300 ELOA2Q8IYF1 753 aaPredicted RBP6.92□□□□□ -1.3
VCP-205ENST00000479300 PPM1KQ8N3J5 372 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 ZNF276Q8N554 614 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 ZNF366Q8N895 744 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 ZNF454Q8N9F8 522 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 TTC13Q8NBP0 860 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 SLC4A11Q8NBS3 891 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 MNS1Q8NEH6 495 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 ENGASEQ8NFI3 743 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 NELFBQ8WX92 580 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 SEMA4DQ92854 862 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 TATDN2Q93075 761 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 BIRC7Q96CA5 298 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 NUP58Q9BVL2 599 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 SRRTQ9BXP5 876 aaKnown RBP6.92□□□□□ -1.3
VCP-205ENST00000479300 EBF2Q9HAK2 575 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.92□□□□□ -1.3
VCP-205ENST00000479300 ELOVL2Q9NXB9 296 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 CTNND2Q9UQB3 1225 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 CEP83Q9Y592 693 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 PCDHB4Q9Y5E5 795 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 ADGRG1Q9Y653 693 aa6.92□□□□□ -1.3
VCP-205ENST00000479300 MYLKQ15746 1914 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 SLC12A8A0AV02 714 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 TRIM49BA6NDI0 452 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 PYCARD-AS1I3L0S3 204 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 BIN1O00499 593 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 WNT9AO14904 365 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 XPO1O14980 1071 aaKnown RBP6.91□□□□□ -1.3
VCP-205ENST00000479300 P4HA2O15460 535 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 PAPSS1O43252 624 aaPredicted RBP6.91□□□□□ -1.3
VCP-205ENST00000479300 TSPAN3O60637 253 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 ZBED1O96006 694 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 CPP00450 1065 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 WNT1P04628 370 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 IGHV4-34P06331 123 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 PAEPP09466 180 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 CCDC172P0C7W6 258 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 OXTRP30559 389 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 CORO1AP31146 461 aaKnown RBP6.91□□□□□ -1.3
VCP-205ENST00000479300 GRK6P43250 576 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 GRIA4P48058 902 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 FMO5P49326 533 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 SEMG2Q02383 582 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 TYRO3Q06418 890 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 PAK1Q13153 545 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 CAMK2GQ13555 558 aaPredicted RBP6.91□□□□□ -1.3
VCP-205ENST00000479300 NAA30Q147X3 362 aaPredicted RBP6.91□□□□□ -1.3
VCP-205ENST00000479300 CBWD6Q4V339 395 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 CBWD3Q5JTY5 395 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 CBWD5Q5RIA9 395 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 TMEM270Q6UE05 265 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 TMCO3Q6UWJ1 677 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 RBM43Q6ZSC3 357 aaKnown RBP6.91□□□□□ -1.3
VCP-205ENST00000479300 PIGZQ86VD9 579 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 TMPRSS12Q86WS5 348 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 DRC7Q8IY82 874 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 SNX19Q92543 992 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 PRCCQ92733 491 aaPredicted RBP6.91□□□□□ -1.3
VCP-205ENST00000479300 ERCC4Q92889 916 aaPredicted RBP6.91□□□□□ -1.3
VCP-205ENST00000479300 IGSF8Q969P0 613 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms