RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 ACOT1Q86TX2 421 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 CBWD2Q8IUF1 395 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 AHI1Q8N157 1196 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 TMEM145Q8NBT3 493 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 SLC2A14Q8TDB8 520 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 JPH3Q8WXH2 748 aaPredicted RBP12.74□□□□□ -0.37
HDAC8-217ENST00000478743 KLK6Q92876 244 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 KLHDC7BQ96G42 594 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 CALN1Q9BXU9 219 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 FOXP3Q9BZS1 431 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 FBXO44Q9H4M3 255 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 FAM49BQ9NUQ9 324 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 KLHL11Q9NVR0 708 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 TBC1D7Q9P0N9 293 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 NAGPAQ9UK23 515 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 INTS6Q9UL03 887 aaKnown RBP12.74□□□□□ -0.37
HDAC8-217ENST00000478743 PDZD2O15018 2839 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 UBE4BO95155 1302 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 VPS37CA5D8V6 355 aaPredicted RBP12.73□□□□□ -0.37
HDAC8-217ENST00000478743 WIPF3A6NGB9 483 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 MUSKO15146 869 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 ALPPL2P10696 532 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 VAV1P15498 845 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 GOT1P17174 413 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 NR1D1P20393 614 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 PRPHP41219 470 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 NUMBP49757 651 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 OXCT1P55809 520 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 TNNC1P63316 161 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 STAT4Q14765 748 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 DEFB133Q30KQ1 61 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 KRTAP21-3Q3LHN1 58 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 CAPRIN2Q6IMN6 1127 aaKnown RBP12.73□□□□□ -0.37
HDAC8-217ENST00000478743 BORAQ6PGQ7 559 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.73□□□□□ -0.37
HDAC8-217ENST00000478743 SND1Q7KZF4 910 aaKnown RBP eCLIP12.73□□□□□ -0.37
HDAC8-217ENST00000478743 STK40Q8N2I9 435 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 FBXO39Q8N4B4 442 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 GRAMD1AQ96CP6 724 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 LMLNQ96KR4 655 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 PISDQ9UG56 409 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 SUN2Q9UH99 717 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 ZNF510Q9Y2H8 683 aa12.73□□□□□ -0.37
HDAC8-217ENST00000478743 EME2A4GXA9 379 aaPredicted RBP12.72□□□□□ -0.37
HDAC8-217ENST00000478743 TCEA3O75764 348 aa12.72□□□□□ -0.37
HDAC8-217ENST00000478743 PRPF6O94906 941 aaKnown RBP12.72□□□□□ -0.37
HDAC8-217ENST00000478743 KRT18P05783 430 aaKnown RBP12.72□□□□□ -0.37
HDAC8-217ENST00000478743 ADORA2BP29275 332 aa12.72□□□□□ -0.37
HDAC8-217ENST00000478743 CLDN2P57739 230 aa12.72□□□□□ -0.37
HDAC8-217ENST00000478743 MYL6P60660 151 aa12.72□□□□□ -0.37
HDAC8-217ENST00000478743 PDE4CQ08493 712 aa12.72□□□□□ -0.37
HDAC8-217ENST00000478743 SFSWAPQ12872 951 aaKnown RBP12.72□□□□□ -0.37
HDAC8-217ENST00000478743 OVGP1Q12889 678 aa12.72□□□□□ -0.37
HDAC8-217ENST00000478743 GNL2Q13823 731 aaKnown RBP12.72□□□□□ -0.37
HDAC8-217ENST00000478743 L1TD1Q5T7N2 865 aaKnown RBP12.72□□□□□ -0.37
HDAC8-217ENST00000478743 RAB11FIP2Q7L804 512 aa12.72□□□□□ -0.37
HDAC8-217ENST00000478743 PRPF39Q86UA1 669 aaKnown RBP12.72□□□□□ -0.37
HDAC8-217ENST00000478743 DTX1Q86Y01 620 aa12.72□□□□□ -0.37
HDAC8-217ENST00000478743 C12orf29Q8N999 325 aa12.72□□□□□ -0.37
HDAC8-217ENST00000478743 ZNF548Q8NEK5 533 aaPredicted RBP12.72□□□□□ -0.37
HDAC8-217ENST00000478743 CDK5RAP3Q96JB5 506 aa12.72□□□□□ -0.37
HDAC8-217ENST00000478743 C8orf76Q96K31 380 aa12.72□□□□□ -0.37
HDAC8-217ENST00000478743 PPP1R13BQ96KQ4 1090 aa12.72□□□□□ -0.37
HDAC8-217ENST00000478743 XYLT2Q9H1B5 865 aa12.72□□□□□ -0.37
HDAC8-217ENST00000478743 USP29Q9HBJ7 922 aa12.72□□□□□ -0.37
HDAC8-217ENST00000478743 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.72□□□□□ -0.37
HDAC8-217ENST00000478743 KLF15Q9UIH9 416 aa12.72□□□□□ -0.37
HDAC8-217ENST00000478743 RABGEF1Q9UJ41 708 aa12.72□□□□□ -0.37
HDAC8-217ENST00000478743 DAAM1Q9Y4D1 1078 aa12.72□□□□□ -0.37
HDAC8-217ENST00000478743 SLC12A8A0AV02 714 aa12.71□□□□□ -0.37
HDAC8-217ENST00000478743 NTN3O00634 580 aaPredicted RBP12.71□□□□□ -0.37
HDAC8-217ENST00000478743 RNASEH1O60930 286 aaKnown RBP12.71□□□□□ -0.37
HDAC8-217ENST00000478743 PRKCGP05129 697 aa12.71□□□□□ -0.37
HDAC8-217ENST00000478743 GARTP22102 1010 aa12.71□□□□□ -0.37
HDAC8-217ENST00000478743 MZF1P28698 734 aaPredicted RBP12.71□□□□□ -0.37
HDAC8-217ENST00000478743 HARS2P49590 506 aaKnown RBP12.71□□□□□ -0.37
HDAC8-217ENST00000478743 DUOXA2Q1HG44 320 aa12.71□□□□□ -0.37
HDAC8-217ENST00000478743 FHL5Q5TD97 284 aa12.71□□□□□ -0.37
HDAC8-217ENST00000478743 OR6B2Q6IFH4 312 aa12.71□□□□□ -0.37
HDAC8-217ENST00000478743 ZCCHC8Q6NZY4 707 aaKnown RBP12.71□□□□□ -0.37
HDAC8-217ENST00000478743 GCNT7Q6ZNI0 430 aa12.71□□□□□ -0.37
HDAC8-217ENST00000478743 CLEC20AQ6ZU45 233 aa12.71□□□□□ -0.37
HDAC8-217ENST00000478743 ATCAYQ86WG3 371 aa12.71□□□□□ -0.37
HDAC8-217ENST00000478743 C9orf43Q8TAL5 461 aaPredicted RBP12.71□□□□□ -0.37
HDAC8-217ENST00000478743 FAM131CQ96AQ9 280 aa12.71□□□□□ -0.37
HDAC8-217ENST00000478743 HVCN1Q96D96 273 aa12.71□□□□□ -0.37
HDAC8-217ENST00000478743 MYEOVQ96EZ4 313 aa12.71□□□□□ -0.37
HDAC8-217ENST00000478743 CCDC3Q9BQI4 270 aa12.71□□□□□ -0.37
HDAC8-217ENST00000478743 DCLK3Q9C098 648 aa12.71□□□□□ -0.37
HDAC8-217ENST00000478743 PREBQ9HCU5 417 aa12.71□□□□□ -0.37
HDAC8-217ENST00000478743 DNAJC28Q9NX36 388 aa12.71□□□□□ -0.37
HDAC8-217ENST00000478743 NOL7Q9UMY1 257 aaKnown RBP12.71□□□□□ -0.37
HDAC8-217ENST00000478743 R3HCC1Q9Y3T6 440 aaKnown RBP12.71□□□□□ -0.37
HDAC8-217ENST00000478743 KIF3AQ9Y496 699 aa12.71□□□□□ -0.37
HDAC8-217ENST00000478743 C9orf172C9J069 976 aa12.7□□□□□ -0.38
HDAC8-217ENST00000478743 PRAMEF26H0Y7S4 382 aa12.7□□□□□ -0.38
HDAC8-217ENST00000478743 K7EM74 188 aa12.7□□□□□ -0.38
HDAC8-217ENST00000478743 SLC31A1O15431 190 aa12.7□□□□□ -0.38
HDAC8-217ENST00000478743 PLRG1O43660 514 aaKnown RBP12.7□□□□□ -0.38
HDAC8-217ENST00000478743 MAGEC1O60732 1142 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms