RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 DSG1Q02413 1049 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 GRIK4Q16099 956 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 ABCA11PQ4W5N1 156 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 XKR4Q5GH76 650 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 CNSTQ6PJW8 725 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 C12orf56Q8IXR9 622 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 ACTRT2Q8TDY3 377 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 DCAF5Q96JK2 942 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 TEKT5Q96M29 485 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 SENP7Q9BQF6 1050 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 MND1Q9BWT6 205 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 C12orf65Q9H3J6 166 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 RNF24Q9Y225 148 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 ADAM18Q9Y3Q7 739 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 RBM8AQ9Y5S9 174 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 SNX13Q9Y5W8 968 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 TEX51A0A1B0GUA7 166 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 XKRYO14609 159 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 SLC19A2O60779 497 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 CSPG5O95196 566 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 MYL3P08590 195 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 PPIBP23284 216 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 DNAJB2P25686 324 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 CPT1AP50416 773 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 PTSQ03393 145 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 ZNF844Q08AG5 666 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 RAB31Q13636 194 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 SPIDRQ14159 915 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 ATF7IP2Q5U623 682 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 TYW3Q6IPR3 259 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 ASB18Q6ZVZ8 466 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 BLIDQ8IZY5 108 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 FTMTQ8N4E7 242 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 AMER2Q8N7J2 671 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 OR6B3Q8NGW1 331 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 PANX3Q96QZ0 392 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 MGME1Q9BQP7 344 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 ELOVL2Q9NXB9 296 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 ACTR3BQ9P1U1 418 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 PPIEQ9UNP9 301 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 SORCS3Q9UPU3 1222 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 PCDHB12Q9Y5F1 795 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 KIAA1107Q9UPP5 1409 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 CDC42BPBQ9Y5S2 1711 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 TRIM49BA6NDI0 452 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 TRIM49D1C9J1S8 452 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 CLDN3O15551 220 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 ATP6V1G1O75348 118 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 USP19O94966 1318 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 ZNF202O95125 648 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 ATE1O95260 518 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 VNN2O95498 520 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 CYP2C8P10632 490 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 RARBP10826 455 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 PDE1AP54750 535 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 MYL6P60660 151 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 ACTN3Q08043 901 aaPredicted RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 MGAT5Q09328 741 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 CDC16Q13042 620 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 TKFCQ3LXA3 575 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 METTL21CQ5VZV1 264 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 MIER2Q8N344 545 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 BORCS5Q969J3 196 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 TEFMQ96QE5 360 aaKnown RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 HAPLN3Q96S86 360 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 PRMT1Q99873 361 aaKnown RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 CYP4F12Q9HCS2 524 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 H0YGN5 161 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 H3BM21 787 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 UBXN7O94888 489 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 CYP1A1P04798 512 aaPredicted RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 RAG1P15918 1043 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 GPTP24298 496 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 RPL10P27635 214 aaKnown RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 GNALP38405 381 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 RPL10AP62906 217 aaKnown RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 GUCY2DQ02846 1103 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 LARS2Q15031 903 aaKnown RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 NDUFA9Q16795 377 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 ZSWIM7Q19AV6 140 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 NIPAL1Q6NVV3 410 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 CMTR2Q8IYT2 770 aaKnown RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 PGAM4Q8N0Y7 254 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 CYP4X1Q8N118 509 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 GPD1LQ8N335 351 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 BEND7Q8N7W2 519 aaPredicted RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 PIH1D2Q8WWB5 315 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 ZNF354BQ96LW1 612 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 FAM118BQ9BPY3 351 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 COLEC11Q9BWP8 271 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 WDR12Q9GZL7 423 aaKnown RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.52□□□□□ -1.53
USF3-202ENST00000478658 C1orf115Q9H7X2 142 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 KANSL2Q9H9L4 492 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 IFT46Q9NQC8 304 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 KCNN3Q9UGI6 736 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 TOP2BQ02880 1626 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 FANCD2Q9BXW9 1451 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 TMEM120BA0PK00 339 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 FCHO1O14526 889 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms