RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 CTSOP43234 321 aaPredicted RBP16.07■□□□□ 0.16
HMGA1-206ENST00000478214 HDAC4P56524 1084 aa16.07■□□□□ 0.16
HMGA1-206ENST00000478214 RPL7AP62424 266 aaKnown RBP16.07■□□□□ 0.16
HMGA1-206ENST00000478214 MAP7D1Q3KQU3 841 aa16.07■□□□□ 0.16
HMGA1-206ENST00000478214 C5orf22Q49AR2 442 aa16.07■□□□□ 0.16
HMGA1-206ENST00000478214 TDRD12Q587J7 1177 aaKnown RBP16.07■□□□□ 0.16
HMGA1-206ENST00000478214 PPP1R15BQ5SWA1 713 aa16.07■□□□□ 0.16
HMGA1-206ENST00000478214 ARTNQ5T4W7 220 aa16.07■□□□□ 0.16
HMGA1-206ENST00000478214 CXorf57Q6NSI4 855 aaKnown RBP16.07■□□□□ 0.16
HMGA1-206ENST00000478214 PPP1R2P3Q6NXS1 205 aa16.07■□□□□ 0.16
HMGA1-206ENST00000478214 STRADAQ7RTN6 431 aa16.07■□□□□ 0.16
HMGA1-206ENST00000478214 APCDD1Q8J025 514 aa16.07■□□□□ 0.16
HMGA1-206ENST00000478214 FAM172AQ8WUF8 416 aa16.07■□□□□ 0.16
HMGA1-206ENST00000478214 SYN2Q92777 582 aaPredicted RBP16.07■□□□□ 0.16
HMGA1-206ENST00000478214 VCPIP1Q96JH7 1222 aa16.07■□□□□ 0.16
HMGA1-206ENST00000478214 MRGPRX1Q96LB2 322 aa16.07■□□□□ 0.16
HMGA1-206ENST00000478214 C1orf74Q96LT6 269 aa16.07■□□□□ 0.16
HMGA1-206ENST00000478214 HAPLN3Q96S86 360 aa16.07■□□□□ 0.16
HMGA1-206ENST00000478214 DUSP15Q9H1R2 295 aaPredicted RBP16.07■□□□□ 0.16
HMGA1-206ENST00000478214 TMEM245Q9H330 911 aa16.07■□□□□ 0.16
HMGA1-206ENST00000478214 ITIH6Q6UXX5 1313 aa16.07■□□□□ 0.16
HMGA1-206ENST00000478214 CFAP54Q96N23 3096 aa16.07■□□□□ 0.16
HMGA1-206ENST00000478214 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.06■□□□□ 0.16
HMGA1-206ENST00000478214 ANKRD62A6NC57 917 aa16.06■□□□□ 0.16
HMGA1-206ENST00000478214 DRGXA6NNA5 263 aa16.06■□□□□ 0.16
HMGA1-206ENST00000478214 ATMINO43313 823 aaPredicted RBP16.06■□□□□ 0.16
HMGA1-206ENST00000478214 CLDN11O75508 207 aa16.06■□□□□ 0.16
HMGA1-206ENST00000478214 MOCS3O95396 460 aa16.06■□□□□ 0.16
HMGA1-206ENST00000478214 FTLP02792 175 aaPredicted RBP16.06■□□□□ 0.16
HMGA1-206ENST00000478214 RETP07949 1114 aa16.06■□□□□ 0.16
HMGA1-206ENST00000478214 PLEKP08567 350 aaPredicted RBP16.06■□□□□ 0.16
HMGA1-206ENST00000478214 CASP14P31944 242 aa16.06■□□□□ 0.16
HMGA1-206ENST00000478214 ADRA1BP35368 520 aa16.06■□□□□ 0.16
HMGA1-206ENST00000478214 ZNF177Q13360 481 aaPredicted RBP16.06■□□□□ 0.16
HMGA1-206ENST00000478214 PLEKHG6Q3KR16 790 aa16.06■□□□□ 0.16
HMGA1-206ENST00000478214 ALFQ53S48 1182 aa16.06■□□□□ 0.16
HMGA1-206ENST00000478214 DCUN1D2Q6PH85 259 aa16.06■□□□□ 0.16
HMGA1-206ENST00000478214 LRRC31Q6UY01 552 aa16.06■□□□□ 0.16
HMGA1-206ENST00000478214 OR52K2Q8NGK3 314 aa16.06■□□□□ 0.16
HMGA1-206ENST00000478214 ZC3H10Q96K80 434 aaKnown RBP16.06■□□□□ 0.16
HMGA1-206ENST00000478214 MKRN2Q9H000 416 aaKnown RBP16.06■□□□□ 0.16
HMGA1-206ENST00000478214 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.06■□□□□ 0.16
HMGA1-206ENST00000478214 E9PAM4 449 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 CCP110O43303 1012 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 SRGAP2O75044 1071 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 RTN2O75298 545 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 ASLP04424 464 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 SERPING1P05155 500 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 ZNF143P52747 638 aaPredicted RBP16.05■□□□□ 0.16
HMGA1-206ENST00000478214 CDH4P55283 916 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 OGDHQ02218 1023 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 MAMLD1Q13495 774 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 SLC12A1Q13621 1099 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 ELF2Q15723 593 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 ACBD5Q5T8D3 534 aaPredicted RBP16.05■□□□□ 0.16
HMGA1-206ENST00000478214 SPECC1LQ69YQ0 1117 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 PLEKHA7Q6IQ23 1121 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 KIAA1324Q6UXG2 1013 aaKnown RBP16.05■□□□□ 0.16
HMGA1-206ENST00000478214 KIAA2013Q8IYS2 634 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 CCDC185Q8N715 623 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 MYO19Q96H55 970 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 SPACA7Q96KW9 195 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 MRGPRX3Q96LB0 322 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 CNPY3Q9BT09 278 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.05■□□□□ 0.16
HMGA1-206ENST00000478214 MAGEB5Q9BZ81 275 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 MTG2Q9H4K7 406 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 PARD6AQ9NPB6 346 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 CD93Q9NPY3 652 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 PARVAQ9NVD7 372 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 MPP6Q9NZW5 540 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 ADAMTS1Q9UHI8 967 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 MBD1Q9UIS9 605 aaPredicted RBP16.05■□□□□ 0.16
HMGA1-206ENST00000478214 BZW2Q9Y6E2 419 aaKnown RBP16.05■□□□□ 0.16
HMGA1-206ENST00000478214 EML5Q05BV3 1969 aa16.05■□□□□ 0.16
HMGA1-206ENST00000478214 IGLV3-10A0A075B6K4 115 aa16.04■□□□□ 0.16
HMGA1-206ENST00000478214 RHOBTB1O94844 696 aa16.04■□□□□ 0.16
HMGA1-206ENST00000478214 TGM1P22735 817 aa16.04■□□□□ 0.16
HMGA1-206ENST00000478214 PLK1P53350 603 aa16.04■□□□□ 0.16
HMGA1-206ENST00000478214 COPAP53621 1224 aa16.04■□□□□ 0.16
HMGA1-206ENST00000478214 OXCT1P55809 520 aa16.04■□□□□ 0.16
HMGA1-206ENST00000478214 ST8SIA6P61647 398 aa16.04■□□□□ 0.16
HMGA1-206ENST00000478214 ECT2LQ008S8 904 aa16.04■□□□□ 0.16
HMGA1-206ENST00000478214 CAMK2GQ13555 558 aaPredicted RBP16.04■□□□□ 0.16
HMGA1-206ENST00000478214 BYSLQ13895 437 aaKnown RBP16.04■□□□□ 0.16
HMGA1-206ENST00000478214 ARL13BQ3SXY8 428 aa16.04■□□□□ 0.16
HMGA1-206ENST00000478214 TFAP2DQ7Z6R9 452 aa16.04■□□□□ 0.16
HMGA1-206ENST00000478214 C11orf74Q86VG3 221 aa16.04■□□□□ 0.16
HMGA1-206ENST00000478214 TMPRSS6Q8IU80 811 aa16.04■□□□□ 0.16
HMGA1-206ENST00000478214 VSTM4Q8IW00 320 aa16.04■□□□□ 0.16
HMGA1-206ENST00000478214 ZNF653Q96CK0 615 aa16.04■□□□□ 0.16
HMGA1-206ENST00000478214 ALG14Q96F25 216 aa16.04■□□□□ 0.16
HMGA1-206ENST00000478214 LOXL4Q96JB6 756 aa16.04■□□□□ 0.16
HMGA1-206ENST00000478214 FEM1AQ9BSK4 669 aa16.04■□□□□ 0.16
HMGA1-206ENST00000478214 ISCUQ9H1K1 167 aa16.04■□□□□ 0.16
HMGA1-206ENST00000478214 ARRDC1-AS1Q9H2J1 176 aa16.04■□□□□ 0.16
HMGA1-206ENST00000478214 PRDM16Q9HAZ2 1276 aa16.04■□□□□ 0.16
HMGA1-206ENST00000478214 CNOT8Q9UFF9 292 aaKnown RBP16.04■□□□□ 0.16
HMGA1-206ENST00000478214 SLCO3A1Q9UIG8 710 aa16.04■□□□□ 0.16
HMGA1-206ENST00000478214 CYP8B1Q9UNU6 501 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms