RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.37□□□□□ -1.55
VPS50-214ENST00000477935 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.37□□□□□ -1.55
VPS50-214ENST00000477935 CGB1A6NKQ9 187 aa5.37□□□□□ -1.55
VPS50-214ENST00000477935 AGPSO00116 658 aa5.37□□□□□ -1.55
VPS50-214ENST00000477935 CXCL11O14625 94 aa5.37□□□□□ -1.55
VPS50-214ENST00000477935 APAF1O14727 1248 aa5.37□□□□□ -1.55
VPS50-214ENST00000477935 EXOC3O60645 756 aa5.37□□□□□ -1.55
VPS50-214ENST00000477935 PARP1P09874 1014 aaKnown RBP5.37□□□□□ -1.55
VPS50-214ENST00000477935 MYCLP12524 364 aaPredicted RBP5.37□□□□□ -1.55
VPS50-214ENST00000477935 PRKAR2BP31323 418 aa5.37□□□□□ -1.55
VPS50-214ENST00000477935 GATMP50440 423 aa5.37□□□□□ -1.55
VPS50-214ENST00000477935 CCT4P50991 539 aaKnown RBP5.37□□□□□ -1.55
VPS50-214ENST00000477935 CASP5P51878 434 aa5.37□□□□□ -1.55
VPS50-214ENST00000477935 HLTFQ14527 1009 aaKnown RBP eCLIP5.37□□□□□ -1.55
VPS50-214ENST00000477935 LRRC26Q2I0M4 334 aa5.37□□□□□ -1.55
VPS50-214ENST00000477935 PRAMEF17Q5VTA0 474 aa5.37□□□□□ -1.55
VPS50-214ENST00000477935 LIX1LQ8IVB5 337 aa5.37□□□□□ -1.55
VPS50-214ENST00000477935 TERB1Q8NA31 727 aa5.37□□□□□ -1.55
VPS50-214ENST00000477935 CTHRC1Q96CG8 243 aa5.37□□□□□ -1.55
VPS50-214ENST00000477935 IQCDQ96DY2 449 aa5.37□□□□□ -1.55
VPS50-214ENST00000477935 DAZAP1Q96EP5 407 aaKnown RBP5.37□□□□□ -1.55
VPS50-214ENST00000477935 ZNF668Q96K58 619 aaPredicted RBP5.37□□□□□ -1.55
VPS50-214ENST00000477935 ISCA1Q9BUE6 129 aa5.37□□□□□ -1.55
VPS50-214ENST00000477935 GEMIN8Q9NWZ8 242 aaKnown RBP5.37□□□□□ -1.55
VPS50-214ENST00000477935 PFASO15067 1338 aa5.37□□□□□ -1.55
VPS50-214ENST00000477935 ZDBF2Q9HCK1 2354 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 POM121BA6NF01 834 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 PI4K2BG5E9Z4 385 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 H7C1Q1 480 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 M0R3H8 397 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 CES2O00748 559 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 PMM2O15305 246 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 THAP12O43422 761 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 FGAP02671 866 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 TSHRP16473 764 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 EIF2S2P20042 333 aaKnown RBP5.36□□□□□ -1.55
VPS50-214ENST00000477935 PRIM2P49643 509 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 RENBPP51606 427 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 RBM5P52756 815 aaKnown RBP eCLIP5.36□□□□□ -1.55
VPS50-214ENST00000477935 PSG6Q00889 435 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 ZNF543Q08ER8 600 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 AIMP1Q12904 312 aaKnown RBP5.36□□□□□ -1.55
VPS50-214ENST00000477935 SLC10A2Q12908 348 aaPredicted RBP5.36□□□□□ -1.55
VPS50-214ENST00000477935 FOXF2Q12947 444 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 MANEALQ5VSG8 457 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 RRAGBQ5VZM2 374 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 MZT2AQ6P582 158 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 PTCHD4Q6ZW05 846 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 SFTPA1Q8IWL2 248 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 SRRM1Q8IYB3 904 aaKnown RBP5.36□□□□□ -1.55
VPS50-214ENST00000477935 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.36□□□□□ -1.55
VPS50-214ENST00000477935 ATP11CQ8NB49 1132 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 PJA1Q8NG27 643 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 PPM1EQ8WY54 764 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 DDB2Q92466 427 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 ZKSCAN4Q969J2 545 aaPredicted RBP5.36□□□□□ -1.55
VPS50-214ENST00000477935 CCDC136Q96JN2 1154 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 SNX18Q96RF0 628 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 THUMPD2Q9BTF0 503 aaKnown RBP5.36□□□□□ -1.55
VPS50-214ENST00000477935 CIPCQ9C0C6 399 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 ANKRD2Q9GZV1 360 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 TRIM36Q9NQ86 728 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 DNAJB11Q9UBS4 358 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 LPAR3Q9UBY5 353 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 ZNF70Q9UC06 446 aaPredicted RBP5.36□□□□□ -1.55
VPS50-214ENST00000477935 VPS51Q9UID3 782 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 RIMKLBQ9ULI2 386 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 NUDCQ9Y266 331 aa5.36□□□□□ -1.55
VPS50-214ENST00000477935 CHD8Q9HCK8 2581 aa5.35□□□□□ -1.55
VPS50-214ENST00000477935 COL3A1P02461 1466 aaPredicted RBP5.35□□□□□ -1.55
VPS50-214ENST00000477935 TISP43B9A030 160 aa5.35□□□□□ -1.55
VPS50-214ENST00000477935 SPRY2O43597 315 aa5.35□□□□□ -1.55
VPS50-214ENST00000477935 NTSR1P30989 418 aa5.35□□□□□ -1.55
VPS50-214ENST00000477935 TUBA4AP68366 448 aa5.35□□□□□ -1.55
VPS50-214ENST00000477935 DCTN1Q14203 1278 aa5.35□□□□□ -1.55
VPS50-214ENST00000477935 C9orf50Q5SZB4 431 aa5.35□□□□□ -1.55
VPS50-214ENST00000477935 MAP3K21Q5TCX8 1036 aa5.35□□□□□ -1.55
VPS50-214ENST00000477935 KLHDC7AQ5VTJ3 777 aa5.35□□□□□ -1.55
VPS50-214ENST00000477935 USP49Q70CQ1 688 aa5.35□□□□□ -1.55
VPS50-214ENST00000477935 VGLL2Q8N8G2 317 aa5.35□□□□□ -1.55
VPS50-214ENST00000477935 WDYHV1Q96HA8 205 aa5.35□□□□□ -1.55
VPS50-214ENST00000477935 HIST1H2AAQ96QV6 131 aa5.35□□□□□ -1.55
VPS50-214ENST00000477935 MMS19Q96T76 1030 aa5.35□□□□□ -1.55
VPS50-214ENST00000477935 NAA15Q9BXJ9 866 aaKnown RBP5.35□□□□□ -1.55
VPS50-214ENST00000477935 AS3MTQ9HBK9 375 aa5.35□□□□□ -1.55
VPS50-214ENST00000477935 CD209Q9NNX6 404 aa5.35□□□□□ -1.55
VPS50-214ENST00000477935 BABAM1Q9NWV8 329 aa5.35□□□□□ -1.55
VPS50-214ENST00000477935 FLRT1Q9NZU1 646 aa5.35□□□□□ -1.55
VPS50-214ENST00000477935 NKX1-2Q9UD57 310 aaPredicted RBP5.35□□□□□ -1.55
VPS50-214ENST00000477935 HPSEQ9Y251 543 aa5.35□□□□□ -1.55
VPS50-214ENST00000477935 PKD1L2Q7Z442 2459 aa5.34□□□□□ -1.55
VPS50-214ENST00000477935 A0A087WZ62 844 aa5.34□□□□□ -1.55
VPS50-214ENST00000477935 LATS1O95835 1130 aa5.34□□□□□ -1.55
VPS50-214ENST00000477935 CREB1P16220 341 aa5.34□□□□□ -1.55
VPS50-214ENST00000477935 STT3AP46977 705 aa5.34□□□□□ -1.55
VPS50-214ENST00000477935 DIO1P49895 249 aa5.34□□□□□ -1.55
VPS50-214ENST00000477935 ALDH5A1P51649 535 aaPredicted RBP5.34□□□□□ -1.55
VPS50-214ENST00000477935 SRSF4Q08170 494 aaKnown RBP5.34□□□□□ -1.55
VPS50-214ENST00000477935 LMAN2Q12907 356 aa5.34□□□□□ -1.55
VPS50-214ENST00000477935 IFIT5Q13325 482 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms