RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 TOP1MTQ969P6 601 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 AZIN2Q96A70 460 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 CHMP6Q96FZ7 201 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 IGSF21Q96ID5 467 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 FCRL2Q96LA5 508 aaPredicted RBP8.15□□□□□ -1.1
VMA21-203ENST00000477649 ZNF558Q96NG5 402 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 XPO6Q96QU8 1125 aaKnown RBP8.15□□□□□ -1.1
VMA21-203ENST00000477649 EBNA1BP2Q99848 306 aaKnown RBP8.15□□□□□ -1.1
VMA21-203ENST00000477649 SELENOSQ9BQE4 189 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 HERC2P3Q9BVR0 1158 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 RHOBTB2Q9BYZ6 727 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 GBA3Q9H227 469 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 C11orf49Q9H6J7 331 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 PRDM10Q9NQV6 1147 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 DNAJC17Q9NVM6 304 aaKnown RBP8.15□□□□□ -1.1
VMA21-203ENST00000477649 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.15□□□□□ -1.1
VMA21-203ENST00000477649 KLHL8Q9P2G9 620 aaPredicted RBP8.15□□□□□ -1.1
VMA21-203ENST00000477649 ZC3H7BQ9UGR2 993 aaKnown RBP8.15□□□□□ -1.1
VMA21-203ENST00000477649 AAR2Q9Y312 384 aaKnown RBP8.15□□□□□ -1.1
VMA21-203ENST00000477649 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.15□□□□□ -1.1
VMA21-203ENST00000477649 PATJQ8NI35 1801 aa8.15□□□□□ -1.11
VMA21-203ENST00000477649 TTC3P53804 2025 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 ATXN2Q99700 1313 aaKnown RBP8.14□□□□□ -1.11
VMA21-203ENST00000477649 FAM47DPA6NHR8 397 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 GOLGA8MH3BSY2 632 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 TM9SF1O15321 606 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 PAGE1O75459 146 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 KRT38O76015 456 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 ZWINTO95229 277 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 METTL18O95568 372 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 AP2A1O95782 977 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 TIMP1P01033 207 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 SOD2P04179 222 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 OR4Q2P0C623 313 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 CSH1P0DML2 217 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 CSH2P0DML3 217 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 VAV1P15498 845 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 CHN1P15882 459 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 PGAM1P18669 254 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 KRT15P19012 456 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 NPY2RP49146 381 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 CCL23P55773 120 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 YBEYP58557 167 aaPredicted RBP8.14□□□□□ -1.11
VMA21-203ENST00000477649 IL9RQ01113 521 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 GUCY1A3Q02108 690 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 DSG1Q02413 1049 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 WASHC5Q12768 1159 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 PLD1Q13393 1074 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 FASTKD3Q14CZ7 662 aaKnown RBP8.14□□□□□ -1.11
VMA21-203ENST00000477649 VEPH1Q14D04 833 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 PSMD5Q16401 504 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 DDR2Q16832 855 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 AFMIDQ63HM1 303 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 STEAP4Q687X5 459 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 NAPEPLDQ6IQ20 393 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 CAND1Q86VP6 1230 aaKnown RBP8.14□□□□□ -1.11
VMA21-203ENST00000477649 NLRP14Q86W24 1093 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 ZNF567Q8N184 647 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 UMODL1-AS1Q8N2C9 162 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 ATPAF2Q8N5M1 289 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 ATAD1Q8NBU5 361 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 ADAM32Q8TC27 787 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 FBF1Q8TES7 1133 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 PTCD2Q8WV60 388 aaKnown RBP8.14□□□□□ -1.11
VMA21-203ENST00000477649 DYDC1Q8WWB3 177 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 SLC44A1Q8WWI5 657 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 ATXN2LQ8WWM7 1075 aaKnown RBP8.14□□□□□ -1.11
VMA21-203ENST00000477649 CASP10Q92851 521 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 TTC17Q96AE7 1141 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 GRAMD1AQ96CP6 724 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 ZNF689Q96CS4 500 aaPredicted RBP8.14□□□□□ -1.11
VMA21-203ENST00000477649 STAMBPL1Q96FJ0 436 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 TRMT2BQ96GJ1 504 aaKnown RBP8.14□□□□□ -1.11
VMA21-203ENST00000477649 TMEM169Q96HH4 297 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 SCLYQ96I15 445 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 MYRFLQ96LU7 910 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 TEKT5Q96M29 485 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 PWWP2AQ96N64 755 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 LGMNQ99538 433 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 DDX50Q9BQ39 737 aaKnown RBP8.14□□□□□ -1.11
VMA21-203ENST00000477649 PLCD4Q9BRC7 762 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 ZYG11BQ9C0D3 744 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 C10orf88Q9H8K7 445 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 LRRC40Q9H9A6 602 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 NMUR1Q9HB89 426 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 BFARQ9NZS9 450 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 MARCH2Q9P0N8 246 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 UXTQ9UBK9 157 aaPredicted RBP8.14□□□□□ -1.11
VMA21-203ENST00000477649 PCDHA11Q9Y5I1 949 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 TANC1Q9C0D5 1861 aa8.14□□□□□ -1.11
VMA21-203ENST00000477649 IGLV3-10A0A075B6K4 115 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 TCRBV7S3A2A0A539 114 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 TCRBV9S1A1TA0A576 114 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 TMEM120BA0PK00 339 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 ARHGAP42A6NI28 874 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 GOLGA8CPA6NN73 597 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 SLC38A8A6NNN8 435 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 E9PAM4 449 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 POC1B-GALNT4F8VUJ3 575 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 F8W810 466 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms