RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 CSKP41240 450 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 CCDC14Q49A88 953 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 USP39Q53GS9 565 aaKnown RBP18.23■□□□□ 0.51
PTPN7-209ENST00000477554 ALFQ53S48 1182 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 PMS2CLQ68D20 193 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 CXorf57Q6NSI4 855 aaKnown RBP18.23■□□□□ 0.51
PTPN7-209ENST00000477554 MON1BQ7L1V2 547 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 FAM131BQ86XD5 332 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 ATP6V0D2Q8N8Y2 350 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 MRGPRX3Q96LB0 322 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 ATXN2Q99700 1313 aaKnown RBP18.22■□□□□ 0.51
PTPN7-209ENST00000477554 TCRBV5S1A1TA0A578 114 aa18.22■□□□□ 0.51
PTPN7-209ENST00000477554 TMCO5BA8MYB1 307 aa18.22■□□□□ 0.51
PTPN7-209ENST00000477554 PATE3B3GLJ2 98 aa18.22■□□□□ 0.51
PTPN7-209ENST00000477554 F5H5T6 163 aa18.22■□□□□ 0.51
PTPN7-209ENST00000477554 ATMINO43313 823 aaPredicted RBP18.22■□□□□ 0.51
PTPN7-209ENST00000477554 NRDCO43847 1150 aa18.22■□□□□ 0.51
PTPN7-209ENST00000477554 ALDH1A2O94788 518 aa18.22■□□□□ 0.51
PTPN7-209ENST00000477554 EPN2O95208 641 aa18.22■□□□□ 0.51
PTPN7-209ENST00000477554 EPHX1P07099 455 aa18.22■□□□□ 0.51
PTPN7-209ENST00000477554 SKILP12757 684 aa18.22■□□□□ 0.51
PTPN7-209ENST00000477554 FERP16591 822 aa18.22■□□□□ 0.51
PTPN7-209ENST00000477554 ABCB4P21439 1286 aa18.22■□□□□ 0.51
PTPN7-209ENST00000477554 HNRNPH3P31942 346 aaKnown RBP18.22■□□□□ 0.51
PTPN7-209ENST00000477554 STK19P49842 368 aaPredicted RBP18.22■□□□□ 0.51
PTPN7-209ENST00000477554 DEUP1Q05D60 604 aa18.22■□□□□ 0.51
PTPN7-209ENST00000477554 CDO1Q16878 200 aa18.22■□□□□ 0.51
PTPN7-209ENST00000477554 SLC25A52Q3SY17 297 aa18.22■□□□□ 0.51
PTPN7-209ENST00000477554 FNDC3BQ53EP0 1204 aaKnown RBP18.22■□□□□ 0.51
PTPN7-209ENST00000477554 PITRM1Q5JRX3 1037 aa18.22■□□□□ 0.51
PTPN7-209ENST00000477554 KIAA1324Q6UXG2 1013 aaKnown RBP18.22■□□□□ 0.51
PTPN7-209ENST00000477554 AHI1Q8N157 1196 aa18.22■□□□□ 0.51
PTPN7-209ENST00000477554 CCAR2Q8N163 923 aaKnown RBP18.22■□□□□ 0.51
PTPN7-209ENST00000477554 RXFP2Q8WXD0 754 aa18.22■□□□□ 0.51
PTPN7-209ENST00000477554 GON4LQ3T8J9 2241 aa18.21■□□□□ 0.51
PTPN7-209ENST00000477554 NUMA1Q14980 2115 aa18.21■□□□□ 0.51
PTPN7-209ENST00000477554 IGHV1OR15-9A0A0B4J2B8 117 aa18.21■□□□□ 0.51
PTPN7-209ENST00000477554 C2CD4BA6NLJ0 364 aa18.21■□□□□ 0.51
PTPN7-209ENST00000477554 H0Y626 953 aa18.21■□□□□ 0.51
PTPN7-209ENST00000477554 PDGFRAP16234 1089 aa18.21■□□□□ 0.51
PTPN7-209ENST00000477554 RFC1P35251 1148 aaPredicted RBP18.21■□□□□ 0.51
PTPN7-209ENST00000477554 SCNN1AP37088 669 aa18.21■□□□□ 0.51
PTPN7-209ENST00000477554 CDH18Q13634 790 aa18.21■□□□□ 0.51
PTPN7-209ENST00000477554 EIF4HQ15056 248 aaKnown RBP18.21■□□□□ 0.51
PTPN7-209ENST00000477554 ASIC2Q16515 512 aa18.21■□□□□ 0.51
PTPN7-209ENST00000477554 PLA2G2CQ5R387 149 aa18.21■□□□□ 0.51
PTPN7-209ENST00000477554 SDE2Q6IQ49 451 aa18.21■□□□□ 0.51
PTPN7-209ENST00000477554 SERPINA13PQ6UXR4 307 aa18.21■□□□□ 0.51
PTPN7-209ENST00000477554 ZNF571Q7Z3V5 609 aaPredicted RBP18.21■□□□□ 0.51
PTPN7-209ENST00000477554 PHF13Q86YI8 300 aaPredicted RBP18.21■□□□□ 0.51
PTPN7-209ENST00000477554 PGAP3Q96FM1 320 aaPredicted RBP18.21■□□□□ 0.51
PTPN7-209ENST00000477554 RPL10LQ96L21 214 aaKnown RBP18.21■□□□□ 0.51
PTPN7-209ENST00000477554 RPRD1AQ96P16 312 aaPredicted RBP18.21■□□□□ 0.51
PTPN7-209ENST00000477554 WDCPQ9H6R7 721 aa18.21■□□□□ 0.51
PTPN7-209ENST00000477554 TMEM74BQ9NUR3 256 aa18.21■□□□□ 0.51
PTPN7-209ENST00000477554 MPP6Q9NZW5 540 aa18.21■□□□□ 0.51
PTPN7-209ENST00000477554 ADAM22Q9P0K1 906 aa18.21■□□□□ 0.51
PTPN7-209ENST00000477554 SLCO3A1Q9UIG8 710 aa18.21■□□□□ 0.51
PTPN7-209ENST00000477554 BZW2Q9Y6E2 419 aaKnown RBP18.21■□□□□ 0.51
PTPN7-209ENST00000477554 NYNRINQ9P2P1 1898 aaKnown RBP18.2■□□□□ 0.5
PTPN7-209ENST00000477554 DLDP09622 509 aaKnown RBP18.2■□□□□ 0.5
PTPN7-209ENST00000477554 VAV1P15498 845 aa18.2■□□□□ 0.5
PTPN7-209ENST00000477554 NSFP46459 744 aaKnown RBP18.2■□□□□ 0.5
PTPN7-209ENST00000477554 SNX16P57768 344 aa18.2■□□□□ 0.5
PTPN7-209ENST00000477554 RPL7AP62424 266 aaKnown RBP18.2■□□□□ 0.5
PTPN7-209ENST00000477554 OGDHQ02218 1023 aa18.2■□□□□ 0.5
PTPN7-209ENST00000477554 CREB5Q02930 508 aa18.2■□□□□ 0.5
PTPN7-209ENST00000477554 LRRC8AQ8IWT6 810 aa18.2■□□□□ 0.5
PTPN7-209ENST00000477554 WFIKKN2Q8TEU8 576 aa18.2■□□□□ 0.5
PTPN7-209ENST00000477554 UCMAQ8WVF2 138 aa18.2■□□□□ 0.5
PTPN7-209ENST00000477554 TTC17Q96AE7 1141 aa18.2■□□□□ 0.5
PTPN7-209ENST00000477554 ALG14Q96F25 216 aa18.2■□□□□ 0.5
PTPN7-209ENST00000477554 DDX50Q9BQ39 737 aaKnown RBP18.2■□□□□ 0.5
PTPN7-209ENST00000477554 HAUS4Q9H6D7 363 aa18.2■□□□□ 0.5
PTPN7-209ENST00000477554 FSCN3Q9NQT6 498 aa18.2■□□□□ 0.5
PTPN7-209ENST00000477554 TTC34A8MYJ7 566 aa18.19■□□□□ 0.5
PTPN7-209ENST00000477554 MPLP40238 635 aa18.19■□□□□ 0.5
PTPN7-209ENST00000477554 DHPSP49366 369 aaPredicted RBP18.19■□□□□ 0.5
PTPN7-209ENST00000477554 RSPO4Q2I0M5 234 aaPredicted RBP18.19■□□□□ 0.5
PTPN7-209ENST00000477554 PLEKHG6Q3KR16 790 aa18.19■□□□□ 0.5
PTPN7-209ENST00000477554 TRIM72Q6ZMU5 477 aa18.19■□□□□ 0.5
PTPN7-209ENST00000477554 PRR23CQ6ZRP0 262 aa18.19■□□□□ 0.5
PTPN7-209ENST00000477554 TMPRSS6Q8IU80 811 aa18.19■□□□□ 0.5
PTPN7-209ENST00000477554 SLC41A1Q8IVJ1 513 aa18.19■□□□□ 0.5
PTPN7-209ENST00000477554 CCDC185Q8N715 623 aa18.19■□□□□ 0.5
PTPN7-209ENST00000477554 CCDC112Q8NEF3 446 aa18.19■□□□□ 0.5
PTPN7-209ENST00000477554 PRSS16Q9NQE7 514 aa18.19■□□□□ 0.5
PTPN7-209ENST00000477554 STAP1Q9ULZ2 295 aa18.19■□□□□ 0.5
PTPN7-209ENST00000477554 DOCK4Q8N1I0 1966 aa18.19■□□□□ 0.5
PTPN7-209ENST00000477554 BCLAF3A2AJT9 711 aaKnown RBP18.18■□□□□ 0.5
PTPN7-209ENST00000477554 FAM72CH0Y354 149 aa18.18■□□□□ 0.5
PTPN7-209ENST00000477554 DDX3XO00571 662 aaKnown RBP eCLIP18.18■□□□□ 0.51e-6■□□□□ 8.9
PTPN7-209ENST00000477554 SERPING1P05155 500 aa18.18■□□□□ 0.5
PTPN7-209ENST00000477554 PLEKP08567 350 aaPredicted RBP18.18■□□□□ 0.5
PTPN7-209ENST00000477554 SLC2A3P11169 496 aa18.18■□□□□ 0.5
PTPN7-209ENST00000477554 POLR2EP19388 210 aaKnown RBP18.18■□□□□ 0.5
PTPN7-209ENST00000477554 RRM1P23921 792 aa18.18■□□□□ 0.5
PTPN7-209ENST00000477554 PRKCIP41743 596 aa18.18■□□□□ 0.5
PTPN7-209ENST00000477554 HDAC4P56524 1084 aa18.18■□□□□ 0.5
PTPN7-209ENST00000477554 KLHL30Q0D2K2 578 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms