RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 ZKSCAN5Q9Y2L8 839 aa15.79■□□□□ 0.12
SEC13-215ENST00000477547 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.79■□□□□ 0.12
SEC13-215ENST00000477547 CCDC66A2RUB6 948 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 MIF4GDA9UHW6 222 aaKnown RBP15.78■□□□□ 0.12
SEC13-215ENST00000477547 SPECC1L-ADORA2AF8WAN1 911 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 KIF5CO60282 957 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 LUC7L3O95232 432 aaKnown RBP15.78■□□□□ 0.12
SEC13-215ENST00000477547 GOT1P17174 413 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 CTNNA2P26232 953 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 EPHB2P29323 1055 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 HOXC13P31276 330 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 CTHP32929 405 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 HTR7P34969 479 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 DNA2P51530 1060 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 ZNF135P52742 658 aaPredicted RBP15.78■□□□□ 0.12
SEC13-215ENST00000477547 NUBP1P53384 320 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 KDSRQ06136 332 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 MLF2Q15773 248 aaPredicted RBP15.78■□□□□ 0.12
SEC13-215ENST00000477547 C5orf22Q49AR2 442 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 ALFQ53S48 1182 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 ODF2Q5BJF6 829 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 MPP7Q5T2T1 576 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 TPRG1Q6ZUI0 275 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 RFX8Q6ZV50 586 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 CHST9Q7L1S5 443 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 TFAP2DQ7Z6R9 452 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 C12orf40Q86WS4 652 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 MFN1Q8IWA4 741 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 CCDC117Q8IWD4 279 aaPredicted RBP15.78■□□□□ 0.12
SEC13-215ENST00000477547 CARNMT1Q8N4J0 409 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 XPO6Q96QU8 1125 aaKnown RBP15.78■□□□□ 0.12
SEC13-215ENST00000477547 ARHGEF3Q9NR81 526 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 DNAJC17Q9NVM6 304 aaKnown RBP15.78■□□□□ 0.12
SEC13-215ENST00000477547 MPP6Q9NZW5 540 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 PPARGC1AQ9UBK2 798 aaKnown RBP15.78■□□□□ 0.12
SEC13-215ENST00000477547 CA14Q9ULX7 337 aa15.78■□□□□ 0.12
SEC13-215ENST00000477547 FGF10O15520 208 aaPredicted RBP15.77■□□□□ 0.12
SEC13-215ENST00000477547 CNTN5O94779 1100 aa15.77■□□□□ 0.12
SEC13-215ENST00000477547 CD48P09326 243 aa15.77■□□□□ 0.12
SEC13-215ENST00000477547 AMPD2Q01433 879 aa15.77■□□□□ 0.12
SEC13-215ENST00000477547 DPYSL3Q14195 570 aa15.77■□□□□ 0.12
SEC13-215ENST00000477547 PDK2Q15119 407 aa15.77■□□□□ 0.12
SEC13-215ENST00000477547 ARTNQ5T4W7 220 aa15.77■□□□□ 0.12
SEC13-215ENST00000477547 RNF43Q68DV7 783 aa15.77■□□□□ 0.12
SEC13-215ENST00000477547 RALGPS2Q86X27 583 aaPredicted RBP15.77■□□□□ 0.12
SEC13-215ENST00000477547 ETFBKMTQ8IXQ9 262 aa15.77■□□□□ 0.12
SEC13-215ENST00000477547 KATNAL2Q8IYT4 538 aa15.77■□□□□ 0.12
SEC13-215ENST00000477547 UBL4BQ8N7F7 174 aa15.77■□□□□ 0.12
SEC13-215ENST00000477547 NAT16Q8N8M0 369 aa15.77■□□□□ 0.12
SEC13-215ENST00000477547 KCTD6Q8NC69 237 aa15.77■□□□□ 0.12
SEC13-215ENST00000477547 WFDC5Q8TCV5 224 aa15.77■□□□□ 0.12
SEC13-215ENST00000477547 CHFRQ96EP1 664 aa15.77■□□□□ 0.12
SEC13-215ENST00000477547 MSANTD3Q96H12 275 aa15.77■□□□□ 0.12
SEC13-215ENST00000477547 ZNF670Q9BS34 389 aa15.77■□□□□ 0.12
SEC13-215ENST00000477547 C8orf33Q9H7E9 229 aaPredicted RBP15.77■□□□□ 0.12
SEC13-215ENST00000477547 CATSPERBQ9H7T0 1116 aa15.77■□□□□ 0.12
SEC13-215ENST00000477547 CWC15Q9P013 229 aaKnown RBP15.77■□□□□ 0.12
SEC13-215ENST00000477547 RCOR3Q9P2K3 495 aaPredicted RBP15.77■□□□□ 0.12
SEC13-215ENST00000477547 ATG2BQ96BY7 2078 aa15.77■□□□□ 0.11
SEC13-215ENST00000477547 DRGXA6NNA5 263 aa15.76■□□□□ 0.11
SEC13-215ENST00000477547 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.76■□□□□ 0.11
SEC13-215ENST00000477547 H0Y626 953 aa15.76■□□□□ 0.11
SEC13-215ENST00000477547 DAPK3O43293 454 aa15.76■□□□□ 0.11
SEC13-215ENST00000477547 TULP3O75386 442 aa15.76■□□□□ 0.11
SEC13-215ENST00000477547 CLDN11O75508 207 aa15.76■□□□□ 0.11
SEC13-215ENST00000477547 RHOQP17081 205 aa15.76■□□□□ 0.11
SEC13-215ENST00000477547 MSNP26038 577 aaKnown RBP15.76■□□□□ 0.11
SEC13-215ENST00000477547 OPRD1P41143 372 aa15.76■□□□□ 0.11
SEC13-215ENST00000477547 ARSEP51690 589 aa15.76■□□□□ 0.11
SEC13-215ENST00000477547 CDH4P55283 916 aa15.76■□□□□ 0.11
SEC13-215ENST00000477547 DPYSQ14117 519 aa15.76■□□□□ 0.11
SEC13-215ENST00000477547 ZNF569Q5MCW4 686 aa15.76■□□□□ 0.11
SEC13-215ENST00000477547 NAIF1Q69YI7 327 aaPredicted RBP15.76■□□□□ 0.11
SEC13-215ENST00000477547 GRAMD4Q6IC98 578 aa15.76■□□□□ 0.11
SEC13-215ENST00000477547 CCDC50Q8IVM0 306 aa15.76■□□□□ 0.11
SEC13-215ENST00000477547 MAP7D3Q8IWC1 876 aa15.76■□□□□ 0.11
SEC13-215ENST00000477547 ZNF557Q8N988 423 aaPredicted RBP15.76■□□□□ 0.11
SEC13-215ENST00000477547 FAM71BQ8TC56 605 aa15.76■□□□□ 0.11
SEC13-215ENST00000477547 RAPGEF5Q92565 580 aa15.76■□□□□ 0.11
SEC13-215ENST00000477547 TSC1Q92574 1164 aa15.76■□□□□ 0.11
SEC13-215ENST00000477547 NKD2Q969F2 451 aaPredicted RBP15.76■□□□□ 0.11
SEC13-215ENST00000477547 RBM41Q96IZ5 413 aaKnown RBP15.76■□□□□ 0.11
SEC13-215ENST00000477547 CSPG4P5Q96PW8 444 aa15.76■□□□□ 0.11
SEC13-215ENST00000477547 KCND1Q9NSA2 647 aa15.76■□□□□ 0.11
SEC13-215ENST00000477547 PCDHA3Q9Y5H8 950 aa15.76■□□□□ 0.11
SEC13-215ENST00000477547 KDELR1P24390 212 aa15.75■□□□□ 0.11
SEC13-215ENST00000477547 EIF2DP41214 584 aaKnown RBP15.75■□□□□ 0.11
SEC13-215ENST00000477547 DGKGP49619 791 aa15.75■□□□□ 0.11
SEC13-215ENST00000477547 RWDD2BP57060 319 aa15.75■□□□□ 0.11
SEC13-215ENST00000477547 MMRN1Q13201 1228 aa15.75■□□□□ 0.11
SEC13-215ENST00000477547 SLC44A4Q53GD3 710 aa15.75■□□□□ 0.11
SEC13-215ENST00000477547 TXNDC11Q6PKC3 985 aa15.75■□□□□ 0.11
SEC13-215ENST00000477547 NLRP14Q86W24 1093 aa15.75■□□□□ 0.11
SEC13-215ENST00000477547 SLC35F6Q8N357 371 aa15.75■□□□□ 0.11
SEC13-215ENST00000477547 RTL3Q8N8U3 475 aaKnown RBP15.75■□□□□ 0.11
SEC13-215ENST00000477547 ALG3Q92685 438 aa15.75■□□□□ 0.11
SEC13-215ENST00000477547 RNF25Q96BH1 459 aaPredicted RBP15.75■□□□□ 0.11
SEC13-215ENST00000477547 HES6Q96HZ4 224 aa15.75■□□□□ 0.11
SEC13-215ENST00000477547 SLC2A11Q9BYW1 496 aa15.75■□□□□ 0.11
SEC13-215ENST00000477547 ARHGEF4Q9NR80 690 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms