RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 ERCC2P18074 760 aa16.66■□□□□ 0.26
VHL-203ENST00000477538 PTPN7P35236 360 aa16.66■□□□□ 0.26
VHL-203ENST00000477538 CDH4P55283 916 aa16.66■□□□□ 0.26
VHL-203ENST00000477538 GAD2Q05329 585 aa16.66■□□□□ 0.26
VHL-203ENST00000477538 NR1H3Q13133 447 aa16.66■□□□□ 0.26
VHL-203ENST00000477538 PAPD7Q5XG87 772 aaKnown RBP16.66■□□□□ 0.26
VHL-203ENST00000477538 KAZNQ674X7 775 aa16.66■□□□□ 0.26
VHL-203ENST00000477538 TFAP2DQ7Z6R9 452 aa16.66■□□□□ 0.26
VHL-203ENST00000477538 NLRP14Q86W24 1093 aa16.66■□□□□ 0.26
VHL-203ENST00000477538 RFX6Q8HWS3 928 aa16.66■□□□□ 0.26
VHL-203ENST00000477538 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.66■□□□□ 0.26
VHL-203ENST00000477538 CSGALNACT1Q8TDX6 532 aa16.66■□□□□ 0.26
VHL-203ENST00000477538 PBKQ96KB5 322 aa16.66■□□□□ 0.26
VHL-203ENST00000477538 MAK16Q9BXY0 300 aaKnown RBP16.66■□□□□ 0.26
VHL-203ENST00000477538 OSBPL8Q9BZF1 889 aa16.66■□□□□ 0.26
VHL-203ENST00000477538 RETREG1Q9H6L5 497 aa16.66■□□□□ 0.26
VHL-203ENST00000477538 TMEM248Q9NWD8 314 aa16.66■□□□□ 0.26
VHL-203ENST00000477538 F5P12259 2224 aa16.66■□□□□ 0.26
VHL-203ENST00000477538 OTOL1A6NHN0 477 aaPredicted RBP16.65■□□□□ 0.26
VHL-203ENST00000477538 C19orf67A6NJJ6 358 aa16.65■□□□□ 0.26
VHL-203ENST00000477538 WASH4PA8MWX3 477 aa16.65■□□□□ 0.26
VHL-203ENST00000477538 DCLK1O15075 740 aa16.65■□□□□ 0.26
VHL-203ENST00000477538 HOXC11O43248 304 aaPredicted RBP16.65■□□□□ 0.26
VHL-203ENST00000477538 CLDN11O75508 207 aa16.65■□□□□ 0.26
VHL-203ENST00000477538 LUC7L3O95232 432 aaKnown RBP16.65■□□□□ 0.26
VHL-203ENST00000477538 TYRP14679 529 aa16.65■□□□□ 0.26
VHL-203ENST00000477538 TDGQ13569 410 aa16.65■□□□□ 0.26
VHL-203ENST00000477538 ITPRIPL2Q3MIP1 535 aa16.65■□□□□ 0.26
VHL-203ENST00000477538 CARNMT1Q8N4J0 409 aa16.65■□□□□ 0.26
VHL-203ENST00000477538 PQLC3Q8N755 202 aa16.65■□□□□ 0.26
VHL-203ENST00000477538 RTL3Q8N8U3 475 aaKnown RBP16.65■□□□□ 0.26
VHL-203ENST00000477538 ZNF592Q92610 1267 aa16.65■□□□□ 0.26
VHL-203ENST00000477538 HEMGNQ9BXL5 484 aa16.65■□□□□ 0.26
VHL-203ENST00000477538 ETNK2Q9NVF9 386 aa16.65■□□□□ 0.26
VHL-203ENST00000477538 GTSE1Q9NYZ3 720 aa16.65■□□□□ 0.26
VHL-203ENST00000477538 ZNF212Q9UDV6 495 aa16.65■□□□□ 0.26
VHL-203ENST00000477538 EFR3BQ9Y2G0 817 aa16.65■□□□□ 0.26
VHL-203ENST00000477538 SAR1BQ9Y6B6 198 aa16.65■□□□□ 0.26
VHL-203ENST00000477538 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.64■□□□□ 0.25
VHL-203ENST00000477538 H0Y626 953 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 CES2O00748 559 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 APOL1O14791 398 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 CEP104O60308 925 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 PRLRP16471 622 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 OR1E1P30953 314 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 MAPKAPK2P49137 400 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 DYNLT1P63172 113 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 AMPD2Q01433 879 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 ZNF177Q13360 481 aaPredicted RBP16.64■□□□□ 0.25
VHL-203ENST00000477538 CDH18Q13634 790 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 TFDP2Q14188 446 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 RNF43Q68DV7 783 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 NCBP2-AS2Q69YL0 99 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 SLC9A4Q6AI14 798 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 TMCO3Q6UWJ1 677 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 MFN1Q8IWA4 741 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 CCDC117Q8IWD4 279 aaPredicted RBP16.64■□□□□ 0.25
VHL-203ENST00000477538 TTC8Q8TAM2 541 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 COG1Q8WTW3 980 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 HERPUD2Q9BSE4 406 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 PRDM16Q9HAZ2 1276 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 DONSONQ9NYP3 566 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 MFHAS1Q9Y4C4 1052 aa16.64■□□□□ 0.25
VHL-203ENST00000477538 ANKRD36A6QL64 1941 aa16.63■□□□□ 0.25
VHL-203ENST00000477538 NARSO43776 548 aaKnown RBP16.63■□□□□ 0.25
VHL-203ENST00000477538 CACNG3O60359 315 aa16.63■□□□□ 0.25
VHL-203ENST00000477538 CST8O60676 142 aa16.63■□□□□ 0.25
VHL-203ENST00000477538 ZFXP17010 805 aaPredicted RBP16.63■□□□□ 0.25
VHL-203ENST00000477538 GJA4P35212 333 aa16.63■□□□□ 0.25
VHL-203ENST00000477538 ADCY2Q08462 1091 aa16.63■□□□□ 0.25
VHL-203ENST00000477538 GAB4Q2WGN9 574 aa16.63■□□□□ 0.25
VHL-203ENST00000477538 BBS12Q6ZW61 710 aa16.63■□□□□ 0.25
VHL-203ENST00000477538 SETD3Q86TU7 594 aaPredicted RBP16.63■□□□□ 0.25
VHL-203ENST00000477538 PLD5Q8N7P1 536 aa16.63■□□□□ 0.25
VHL-203ENST00000477538 NAT16Q8N8M0 369 aa16.63■□□□□ 0.25
VHL-203ENST00000477538 WFDC5Q8TCV5 224 aa16.63■□□□□ 0.25
VHL-203ENST00000477538 DNASE1L2Q92874 299 aa16.63■□□□□ 0.25
VHL-203ENST00000477538 XPO6Q96QU8 1125 aaKnown RBP16.63■□□□□ 0.25
VHL-203ENST00000477538 TRPV5Q9NQA5 729 aa16.63■□□□□ 0.25
VHL-203ENST00000477538 NDFIP2Q9NV92 336 aa16.63■□□□□ 0.25
VHL-203ENST00000477538 CLEC4EQ9ULY5 219 aa16.63■□□□□ 0.25
VHL-203ENST00000477538 ZNF185O15231 689 aa16.62■□□□□ 0.25
VHL-203ENST00000477538 MFSD11O43934 449 aa16.62■□□□□ 0.25
VHL-203ENST00000477538 TJP3O95049 919 aa16.62■□□□□ 0.25
VHL-203ENST00000477538 FGGP02679 453 aa16.62■□□□□ 0.25
VHL-203ENST00000477538 RHOCP08134 193 aa16.62■□□□□ 0.25
VHL-203ENST00000477538 SRFP11831 508 aa16.62■□□□□ 0.25
VHL-203ENST00000477538 SERPINB6P35237 376 aa16.62■□□□□ 0.25
VHL-203ENST00000477538 PAFAH1B3Q15102 231 aaKnown RBP16.62■□□□□ 0.25
VHL-203ENST00000477538 C6orf118Q5T5N4 469 aa16.62■□□□□ 0.25
VHL-203ENST00000477538 CXorf57Q6NSI4 855 aaKnown RBP16.62■□□□□ 0.25
VHL-203ENST00000477538 C12orf40Q86WS4 652 aa16.62■□□□□ 0.25
VHL-203ENST00000477538 SLC13A5Q86YT5 568 aaPredicted RBP16.62■□□□□ 0.25
VHL-203ENST00000477538 UMODL1-AS1Q8N2C9 162 aa16.62■□□□□ 0.25
VHL-203ENST00000477538 RASGEF1CQ8N431 466 aa16.62■□□□□ 0.25
VHL-203ENST00000477538 LZTR1Q8N653 840 aa16.62■□□□□ 0.25
VHL-203ENST00000477538 NPWQ8N729 165 aa16.62■□□□□ 0.25
VHL-203ENST00000477538 ZNF557Q8N988 423 aaPredicted RBP16.62■□□□□ 0.25
VHL-203ENST00000477538 KIF18AQ8NI77 898 aa16.62■□□□□ 0.25
VHL-203ENST00000477538 FIBINQ8TAL6 211 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms